RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 VCANP13611 3396 aa6.46□□□□□ -1.38
CLIP1-201ENST00000302528 SZT2Q5T011 3432 aa6.45□□□□□ -1.38
CLIP1-201ENST00000302528 MMP24-AS1A0A0U1RRL7 71 aa6.44□□□□□ -1.38
CLIP1-201ENST00000302528 VPS13AQ96RL7 3174 aa6.44□□□□□ -1.38
CLIP1-201ENST00000302528 PLAC4Q8WY50 150 aa6.44□□□□□ -1.38
CLIP1-201ENST00000302528 ROMO1P60602 79 aa6.44□□□□□ -1.38
CLIP1-201ENST00000302528 RPL37P61927 97 aaKnown RBP6.43□□□□□ -1.38
CLIP1-201ENST00000302528 ANKRD17O75179 2603 aaKnown RBP6.43□□□□□ -1.38
CLIP1-201ENST00000302528 SEC61BP60468 96 aaKnown RBP6.43□□□□□ -1.38
CLIP1-201ENST00000302528 CR1P17927 2039 aa6.42□□□□□ -1.38
CLIP1-201ENST00000302528 FLG2Q5D862 2391 aaPredicted RBP6.42□□□□□ -1.38
CLIP1-201ENST00000302528 Q5W150 140 aa6.42□□□□□ -1.38
CLIP1-201ENST00000302528 M0QZ58 72 aa6.41□□□□□ -1.38
CLIP1-201ENST00000302528 FASNP49327 2511 aaKnown RBP6.41□□□□□ -1.38
CLIP1-201ENST00000302528 CELSR3Q9NYQ7 3312 aa6.39□□□□□ -1.39
CLIP1-201ENST00000302528 WDFY4Q6ZS81 3184 aa6.39□□□□□ -1.39
CLIP1-201ENST00000302528 Q5VV11 94 aa6.39□□□□□ -1.39
CLIP1-201ENST00000302528 MGAQ8IWI9 3026 aa6.38□□□□□ -1.39
CLIP1-201ENST00000302528 USP24Q9UPU5 2620 aa6.36□□□□□ -1.39
CLIP1-201ENST00000302528 A0A096LNT2 108 aa6.35□□□□□ -1.39
CLIP1-201ENST00000302528 Q5XG85 94 aa6.35□□□□□ -1.39
CLIP1-201ENST00000302528 PLAC8Q9NZF1 115 aa6.35□□□□□ -1.39
CLIP1-201ENST00000302528 DSPP15924 2871 aaKnown RBP6.34□□□□□ -1.4
CLIP1-201ENST00000302528 MGAM2Q2M2H8 2515 aa6.34□□□□□ -1.4
CLIP1-201ENST00000302528 FP248Q71RG6 208 aaPredicted RBP6.33□□□□□ -1.4
CLIP1-201ENST00000302528 NBEAQ8NFP9 2946 aa6.32□□□□□ -1.4
CLIP1-201ENST00000302528 SPEGQ15772 3267 aa6.31□□□□□ -1.4
CLIP1-201ENST00000302528 KRTAP16-1A8MUX0 517 aa6.29□□□□□ -1.4
CLIP1-201ENST00000302528 FRYLO94915 3013 aa6.28□□□□□ -1.4
CLIP1-201ENST00000302528 FRYQ5TBA9 3013 aa6.28□□□□□ -1.4
CLIP1-201ENST00000302528 LINC00472Q9H8W2 130 aa6.28□□□□□ -1.4
CLIP1-201ENST00000302528 ADM2Q7Z4H4 148 aa6.28□□□□□ -1.4
CLIP1-201ENST00000302528 Q5VSD8 79 aa6.27□□□□□ -1.41
CLIP1-201ENST00000302528 REV3LO60673 3130 aa6.26□□□□□ -1.41
CLIP1-201ENST00000302528 SPATA8Q6RVD6 105 aa6.25□□□□□ -1.41
CLIP1-201ENST00000302528 SPRR1AP35321 89 aa6.25□□□□□ -1.41
CLIP1-201ENST00000302528 SPTBN5Q9NRC6 3674 aaKnown RBP6.25□□□□□ -1.41
CLIP1-201ENST00000302528 SPRR1BP22528 89 aa6.24□□□□□ -1.41
CLIP1-201ENST00000302528 CYSTM1Q9H1C7 97 aa6.23□□□□□ -1.41
CLIP1-201ENST00000302528 ZNF292O60281 2723 aa6.23□□□□□ -1.41
CLIP1-201ENST00000302528 C20orf166-AS1Q96NR2 134 aa6.23□□□□□ -1.41
CLIP1-201ENST00000302528 EPG5Q9HCE0 2579 aa6.21□□□□□ -1.42
CLIP1-201ENST00000302528 AKAP13Q12802 2813 aa6.2□□□□□ -1.42
CLIP1-201ENST00000302528 Q8NDZ9 215 aa6.2□□□□□ -1.42
CLIP1-201ENST00000302528 KRTAP26-1Q6PEX3 210 aa6.19□□□□□ -1.42
CLIP1-201ENST00000302528 KRTAP1-3Q8IUG1 177 aa6.19□□□□□ -1.42
CLIP1-201ENST00000302528 KRTAP1-1Q07627 177 aa6.18□□□□□ -1.42
CLIP1-201ENST00000302528 ASB16-AS1Q495Z4 193 aa6.18□□□□□ -1.42
CLIP1-201ENST00000302528 COL6A3P12111 3177 aa6.17□□□□□ -1.42
CLIP1-201ENST00000302528 EYSQ5T1H1 3165 aa6.17□□□□□ -1.42
CLIP1-201ENST00000302528 ATRQ13535 2644 aa6.17□□□□□ -1.42
CLIP1-201ENST00000302528 FREM2Q5SZK8 3169 aa6.17□□□□□ -1.42
CLIP1-201ENST00000302528 PANO1I0J062 215 aa6.16□□□□□ -1.42
CLIP1-201ENST00000302528 Q6ZR54 194 aa6.16□□□□□ -1.42
CLIP1-201ENST00000302528 BOD1L1Q8NFC6 3051 aa6.14□□□□□ -1.43
CLIP1-201ENST00000302528 MYO15AQ9UKN7 3530 aa6.14□□□□□ -1.43
CLIP1-201ENST00000302528 ADGRG4Q8IZF6 3080 aa6.13□□□□□ -1.43
CLIP1-201ENST00000302528 OXTP01178 125 aa6.13□□□□□ -1.43
CLIP1-201ENST00000302528 USP34Q70CQ2 3546 aa6.12□□□□□ -1.43
CLIP1-201ENST00000302528 KALRNO60229 2985 aa6.12□□□□□ -1.43
CLIP1-201ENST00000302528 FLNBO75369 2602 aaKnown RBP6.12□□□□□ -1.43
CLIP1-201ENST00000302528 KRTAP10-1P60331 282 aa6.12□□□□□ -1.43
CLIP1-201ENST00000302528 MAST4O15021 2626 aa6.11□□□□□ -1.43
CLIP1-201ENST00000302528 CENPEQ02224 2701 aa6.1□□□□□ -1.43
CLIP1-201ENST00000302528 FLNAP21333 2647 aaKnown RBP6.1□□□□□ -1.43
CLIP1-201ENST00000302528 STAB1Q9NY15 2570 aa6.09□□□□□ -1.43
CLIP1-201ENST00000302528 KRTAP25-1Q3LHN0 102 aa6.08□□□□□ -1.44
CLIP1-201ENST00000302528 HECTD1Q9ULT8 2610 aa6.08□□□□□ -1.44
CLIP1-201ENST00000302528 LCE6AA0A183 80 aa6.07□□□□□ -1.44
CLIP1-201ENST00000302528 MAP1AP78559 2803 aaPredicted RBP6.07□□□□□ -1.44
CLIP1-201ENST00000302528 KRTAP10-2P60368 255 aa6.07□□□□□ -1.44
CLIP1-201ENST00000302528 KRTAP1-5Q9BYS1 174 aa6.07□□□□□ -1.44
CLIP1-201ENST00000302528 NDUFAF8A1L188 74 aa6.06□□□□□ -1.44
CLIP1-201ENST00000302528 A8MUU9 505 aa6.06□□□□□ -1.44
CLIP1-201ENST00000302528 DMBT1Q9UGM3 2413 aaPredicted RBP6.06□□□□□ -1.44
CLIP1-201ENST00000302528 ITPR3Q14573 2671 aa6.04□□□□□ -1.44
CLIP1-201ENST00000302528 LRBAP50851 2863 aa6.04□□□□□ -1.44
CLIP1-201ENST00000302528 A8MU10 97 aa6.04□□□□□ -1.44
CLIP1-201ENST00000302528 TACC2O95359 2948 aa6.02□□□□□ -1.45
CLIP1-201ENST00000302528 ZZEF1O43149 2961 aa6□□□□□ -1.45
CLIP1-201ENST00000302528 LOC400499M0QZD8 3231 aa6□□□□□ -1.45
CLIP1-201ENST00000302528 C10orf95Q9H7T3 257 aa5.99□□□□□ -1.45
CLIP1-201ENST00000302528 CHD6Q8TD26 2715 aa5.99□□□□□ -1.45
CLIP1-201ENST00000302528 KRTAP29-1A8MX34 341 aaPredicted RBP5.99□□□□□ -1.45
CLIP1-201ENST00000302528 ATMQ13315 3056 aa5.98□□□□□ -1.45
CLIP1-201ENST00000302528 TNP1P09430 55 aa5.98□□□□□ -1.45
CLIP1-201ENST00000302528 A0A087X002 238 aa5.97□□□□□ -1.45
CLIP1-201ENST00000302528 DMXL2Q8TDJ6 3036 aa5.97□□□□□ -1.45
CLIP1-201ENST00000302528 STAB2Q8WWQ8 2551 aa5.96□□□□□ -1.46
CLIP1-201ENST00000302528 A6NN06 94 aa5.94□□□□□ -1.46
CLIP1-201ENST00000302528 CFAP46Q8IYW2 2715 aa5.94□□□□□ -1.46
CLIP1-201ENST00000302528 CFAP47Q6ZTR5 3102 aa5.94□□□□□ -1.46
CLIP1-201ENST00000302528 NOTCH2NLQ7Z3S9 236 aa5.93□□□□□ -1.46
CLIP1-201ENST00000302528 GCN1Q92616 2671 aaKnown RBP5.93□□□□□ -1.46
CLIP1-201ENST00000302528 TNRC18O15417 2968 aaPredicted RBP5.92□□□□□ -1.46
CLIP1-201ENST00000302528 TEX15Q9BXT5 2789 aa5.91□□□□□ -1.46
CLIP1-201ENST00000302528 NBEAL1Q6ZS30 2694 aa5.91□□□□□ -1.46
CLIP1-201ENST00000302528 KRTAP4-16G5E9R7 235 aaPredicted RBP5.9□□□□□ -1.46
CLIP1-201ENST00000302528 WDFY3Q8IZQ1 3526 aa5.9□□□□□ -1.47
CLIP1-201ENST00000302528 DMXL1Q9Y485 3027 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms