RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 Q8N377 158 aa13.92□□□□□ -0.18
TPM4-201ENST00000300933 SMIM29Q86T20 159 aa13.91□□□□□ -0.18
TPM4-201ENST00000300933 KMT2AQ03164 3969 aa13.91□□□□□ -0.18
TPM4-201ENST00000300933 IGLV5-37A0A075B6J1 123 aa13.9□□□□□ -0.18
TPM4-201ENST00000300933 LRCOL1A6NCL2 159 aa13.9□□□□□ -0.18
TPM4-201ENST00000300933 NBDYA0A0U1RRE5 68 aa13.88□□□□□ -0.19
TPM4-201ENST00000300933 UBE2BP63146 152 aa13.88□□□□□ -0.19
TPM4-201ENST00000300933 SPRR1AP35321 89 aa13.87□□□□□ -0.19
TPM4-201ENST00000300933 NUPR2A6NF83 97 aa13.86□□□□□ -0.19
TPM4-201ENST00000300933 C16orf90A8MZG2 172 aa13.86□□□□□ -0.19
TPM4-201ENST00000300933 CNBPP62633 177 aaKnown RBP13.86□□□□□ -0.19
TPM4-201ENST00000300933 PRLHP81277 87 aa13.84□□□□□ -0.19
TPM4-201ENST00000300933 REG3GQ6UW15 175 aa13.84□□□□□ -0.19
TPM4-201ENST00000300933 KRTAP11-1Q8IUC1 163 aa13.84□□□□□ -0.19
TPM4-201ENST00000300933 DHRS4-AS1Q9P1J3 65 aa13.83□□□□□ -0.2
TPM4-201ENST00000300933 PHF5AQ7RTV0 110 aaKnown RBP13.82□□□□□ -0.2
TPM4-201ENST00000300933 A0A1W2PNM2 257 aa13.8□□□□□ -0.2
TPM4-201ENST00000300933 PANO1I0J062 215 aa13.8□□□□□ -0.2
TPM4-201ENST00000300933 VPS13DQ5THJ4 4388 aa13.79□□□□□ -0.2
TPM4-201ENST00000300933 A0A0G2JQZ4 141 aa13.79□□□□□ -0.2
TPM4-201ENST00000300933 IGLV5-48A0A075B6I7 105 aa13.78□□□□□ -0.2
TPM4-201ENST00000300933 Q6ZRN7 208 aaPredicted RBP13.78□□□□□ -0.2
TPM4-201ENST00000300933 FBN3Q75N90 2809 aa13.77□□□□□ -0.2
TPM4-201ENST00000300933 C1orf195Q5TG92 126 aa13.77□□□□□ -0.21
TPM4-201ENST00000300933 C1orf137Q5JT78 98 aa13.76□□□□□ -0.21
TPM4-201ENST00000300933 PRR4Q16378 134 aa13.75□□□□□ -0.21
TPM4-201ENST00000300933 C14orf177Q52M58 125 aa13.75□□□□□ -0.21
TPM4-201ENST00000300933 C9orf163Q8N9P6 203 aa13.74□□□□□ -0.21
TPM4-201ENST00000300933 hDV103S1A0JD37 113 aa13.73□□□□□ -0.21
TPM4-201ENST00000300933 C1orf64Q8NEQ6 169 aa13.73□□□□□ -0.21
TPM4-201ENST00000300933 K7EQZ3 153 aa13.72□□□□□ -0.21
TPM4-201ENST00000300933 DNAH2Q9P225 4427 aa13.72□□□□□ -0.21
TPM4-201ENST00000300933 DSCR10P59022 87 aa13.7□□□□□ -0.22
TPM4-201ENST00000300933 Q8NBF4 154 aa13.68□□□□□ -0.22
TPM4-201ENST00000300933 HECTD4Q9Y4D8 3996 aa13.68□□□□□ -0.22
TPM4-201ENST00000300933 LCE6AA0A183 80 aa13.66□□□□□ -0.22
TPM4-201ENST00000300933 PSPHP1O15172 72 aa13.66□□□□□ -0.22
TPM4-201ENST00000300933 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.66□□□□□ -0.22
TPM4-201ENST00000300933 TNP2Q05952 138 aa13.65□□□□□ -0.22
TPM4-201ENST00000300933 DEFB116Q30KQ4 102 aa13.65□□□□□ -0.22
TPM4-201ENST00000300933 V9GYY9 64 aa13.63□□□□□ -0.23
TPM4-201ENST00000300933 ZCCHC13Q8WW36 166 aaKnown RBP13.62□□□□□ -0.23
TPM4-201ENST00000300933 A0A087WTM6 91 aa13.61□□□□□ -0.23
TPM4-201ENST00000300933 LINC00476Q8WZB0 136 aa13.59□□□□□ -0.23
TPM4-201ENST00000300933 SPRR4Q96PI1 79 aa13.59□□□□□ -0.23
TPM4-201ENST00000300933 A0A1B0GW54 56 aa13.58□□□□□ -0.23
TPM4-201ENST00000300933 HCG22E2RYF7 251 aa13.57□□□□□ -0.24
TPM4-201ENST00000300933 Q1T7F1 81 aa13.57□□□□□ -0.24
TPM4-201ENST00000300933 FRAS1Q86XX4 4008 aa13.57□□□□□ -0.24
TPM4-201ENST00000300933 LY6G6CO95867 125 aa13.57□□□□□ -0.24
TPM4-201ENST00000300933 WFDC13Q8IUB5 93 aa13.57□□□□□ -0.24
TPM4-201ENST00000300933 UBE2AP49459 152 aa13.56□□□□□ -0.24
TPM4-201ENST00000300933 TRAV22A0A0B4J277 110 aa13.54□□□□□ -0.24
TPM4-201ENST00000300933 IGFL1Q6UW32 110 aa13.53□□□□□ -0.24
TPM4-201ENST00000300933 Q6ZR54 194 aa13.53□□□□□ -0.24
TPM4-201ENST00000300933 RTL8CO15255 209 aa13.52□□□□□ -0.25
TPM4-201ENST00000300933 SPACA4Q8TDM5 124 aa13.51□□□□□ -0.25
TPM4-201ENST00000300933 PRR15Q8IV56 129 aa13.5□□□□□ -0.25
TPM4-201ENST00000300933 SEC61GP60059 68 aa13.48□□□□□ -0.25
TPM4-201ENST00000300933 DNAH6Q9C0G6 4158 aa13.48□□□□□ -0.25
TPM4-201ENST00000300933 RPL37AP61513 92 aaKnown RBP13.47□□□□□ -0.25
TPM4-201ENST00000300933 A8MUN3 132 aa13.46□□□□□ -0.25
TPM4-201ENST00000300933 CYP4F30PQ9H0H9 118 aa13.46□□□□□ -0.25
TPM4-201ENST00000300933 LINC00208Q96KT6 92 aa13.46□□□□□ -0.26
TPM4-201ENST00000300933 DNAH17Q9UFH2 4485 aa13.45□□□□□ -0.26
TPM4-201ENST00000300933 A0A087WSZ3 146 aa13.45□□□□□ -0.26
TPM4-201ENST00000300933 C1orf134Q5TEV5 83 aa13.45□□□□□ -0.26
TPM4-201ENST00000300933 HYDINQ4G0P3 5121 aa13.43□□□□□ -0.26
TPM4-201ENST00000300933 MP68P56378 58 aa13.43□□□□□ -0.26
TPM4-201ENST00000300933 DNAH8Q96JB1 4490 aa13.43□□□□□ -0.26
TPM4-201ENST00000300933 A8MU10 97 aa13.42□□□□□ -0.26
TPM4-201ENST00000300933 IGLV5-52A0A0A0MRZ9 124 aa13.41□□□□□ -0.26
TPM4-201ENST00000300933 NDUFB1O75438 58 aa13.41□□□□□ -0.26
TPM4-201ENST00000300933 PMAIP1Q13794 54 aa13.4□□□□□ -0.26
TPM4-201ENST00000300933 H0Y9J4 135 aa13.4□□□□□ -0.26
TPM4-201ENST00000300933 KRTAP13-1Q8IUC0 172 aa13.38□□□□□ -0.27
TPM4-201ENST00000300933 ANAPC11Q9NYG5 84 aa13.37□□□□□ -0.27
TPM4-201ENST00000300933 PSORS1C2Q9UIG4 136 aa13.37□□□□□ -0.27
TPM4-201ENST00000300933 IGLV9-49A0A0B4J1Y8 123 aa13.36□□□□□ -0.27
TPM4-201ENST00000300933 IGLV8-61A0A075B6I0 122 aa13.34□□□□□ -0.27
TPM4-201ENST00000300933 H0Y9P7 68 aa13.33□□□□□ -0.28
TPM4-201ENST00000300933 DNAH11Q96DT5 4516 aa13.33□□□□□ -0.28
TPM4-201ENST00000300933 SPRR1BP22528 89 aa13.32□□□□□ -0.28
TPM4-201ENST00000300933 KRTAP10-2P60368 255 aa13.31□□□□□ -0.28
TPM4-201ENST00000300933 Q5VV11 94 aa13.31□□□□□ -0.28
TPM4-201ENST00000300933 CASC2Q6XLA1 102 aa13.3□□□□□ -0.28
TPM4-201ENST00000300933 DNAH5Q8TE73 4624 aa13.3□□□□□ -0.28
TPM4-201ENST00000300933 KRTAP29-1A8MX34 341 aaPredicted RBP13.28□□□□□ -0.28
TPM4-201ENST00000300933 PLAC8Q9NZF1 115 aa13.27□□□□□ -0.29
TPM4-201ENST00000300933 CHKB-CPT1BH3BT56 60 aa13.26□□□□□ -0.29
TPM4-201ENST00000300933 Q8N9P0 234 aaPredicted RBP13.24□□□□□ -0.29
TPM4-201ENST00000300933 WWC2-AS2Q96NR7 200 aa13.24□□□□□ -0.29
TPM4-201ENST00000300933 PRR15LQ9BU68 103 aa13.24□□□□□ -0.29
TPM4-201ENST00000300933 SPANXA2-OT1Q8N9U9 137 aa13.19□□□□□ -0.3
TPM4-201ENST00000300933 ZNF861PO60384 105 aa13.17□□□□□ -0.3
TPM4-201ENST00000300933 MOBPQ13875 183 aa13.16□□□□□ -0.3
TPM4-201ENST00000300933 SPTSSBQ8NFR3 76 aa13.16□□□□□ -0.3
TPM4-201ENST00000300933 CIRBP-AS1Q8TBR5 109 aa13.16□□□□□ -0.3
TPM4-201ENST00000300933 ALMS1Q8TCU4 4167 aa13.16□□□□□ -0.3
TPM4-201ENST00000300933 FAT2Q9NYQ8 4349 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms