RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 TMEM256-PLSCR3K7ERE1 68 aa12.81□□□□□ -0.36
SMCO4-201ENST00000298966 UBE2AP49459 152 aa12.81□□□□□ -0.36
SMCO4-201ENST00000298966 SPINK6Q6UWN8 80 aa12.81□□□□□ -0.36
SMCO4-201ENST00000298966 PPDPFLQ8WWR9 84 aa12.81□□□□□ -0.36
SMCO4-201ENST00000298966 Q6ZQY7 126 aa12.8□□□□□ -0.36
SMCO4-201ENST00000298966 Q9BRP9 147 aa12.79□□□□□ -0.36
SMCO4-201ENST00000298966 PSORS1C2Q9UIG4 136 aa12.79□□□□□ -0.36
SMCO4-201ENST00000298966 K7ERU9 68 aa12.76□□□□□ -0.37
SMCO4-201ENST00000298966 PRLHP81277 87 aa12.76□□□□□ -0.37
SMCO4-201ENST00000298966 KRTAP13-1Q8IUC0 172 aa12.76□□□□□ -0.37
SMCO4-201ENST00000298966 LPAP08519 4548 aa12.76□□□□□ -0.37
SMCO4-201ENST00000298966 SMCR5Q8TEV8 140 aa12.75□□□□□ -0.37
SMCO4-201ENST00000298966 J3QR89 54 aa12.74□□□□□ -0.37
SMCO4-201ENST00000298966 C1orf137Q5JT78 98 aa12.74□□□□□ -0.37
SMCO4-201ENST00000298966 OBSCN-AS1Q96MR7 158 aa12.73□□□□□ -0.37
SMCO4-201ENST00000298966 IGLV5-48A0A075B6I7 105 aa12.72□□□□□ -0.37
SMCO4-201ENST00000298966 TEX49A0A1B0GTD5 131 aa12.72□□□□□ -0.37
SMCO4-201ENST00000298966 HIGD2AQ9BW72 106 aa12.72□□□□□ -0.37
SMCO4-201ENST00000298966 ZNF861PO60384 105 aa12.71□□□□□ -0.37
SMCO4-201ENST00000298966 JMJD7-PLA2G4BH0Y9G9 81 aa12.69□□□□□ -0.38
SMCO4-201ENST00000298966 IGLV7-43P04211 117 aa12.69□□□□□ -0.38
SMCO4-201ENST00000298966 ZNF706Q9Y5V0 76 aaPredicted RBP12.68□□□□□ -0.38
SMCO4-201ENST00000298966 ERC2-IT1O76042 136 aa12.66□□□□□ -0.38
SMCO4-201ENST00000298966 KRTAP9-2Q9BYQ4 174 aa12.66□□□□□ -0.38
SMCO4-201ENST00000298966 LINC01547P58512 204 aaPredicted RBP12.65□□□□□ -0.38
SMCO4-201ENST00000298966 SPRR1BP22528 89 aa12.64□□□□□ -0.39
SMCO4-201ENST00000298966 C21orf62-AS1Q17RA5 79 aa12.64□□□□□ -0.39
SMCO4-201ENST00000298966 Q8N377 158 aa12.63□□□□□ -0.39
SMCO4-201ENST00000298966 LAMTOR3Q9UHA4 124 aa12.63□□□□□ -0.39
SMCO4-201ENST00000298966 NDUFV3P56181 108 aaKnown RBP12.61□□□□□ -0.39
SMCO4-201ENST00000298966 ST20-AS1Q8NBB2 130 aa12.61□□□□□ -0.39
SMCO4-201ENST00000298966 DEFB105AQ8NG35 78 aa12.6□□□□□ -0.39
SMCO4-201ENST00000298966 RBM3P98179 157 aaKnown RBP12.58□□□□□ -0.4
SMCO4-201ENST00000298966 C14orf132Q9NPU4 83 aa12.58□□□□□ -0.4
SMCO4-201ENST00000298966 A0A0U1RQV1 116 aa12.57□□□□□ -0.4
SMCO4-201ENST00000298966 FAM240AA0A1B0GVK7 77 aa12.57□□□□□ -0.4
SMCO4-201ENST00000298966 PDE6GP18545 87 aa12.57□□□□□ -0.4
SMCO4-201ENST00000298966 SPRR4Q96PI1 79 aa12.56□□□□□ -0.4
SMCO4-201ENST00000298966 MUC2Q02817 5179 aa12.55□□□□□ -0.4
SMCO4-201ENST00000298966 LOC110117498A0A087WWA1 95 aa12.55□□□□□ -0.4
SMCO4-201ENST00000298966 LINC00483Q53H64 154 aa12.55□□□□□ -0.4
SMCO4-201ENST00000298966 F8WEM9 126 aa12.54□□□□□ -0.4
SMCO4-201ENST00000298966 ACYP1P07311 99 aa12.53□□□□□ -0.4
SMCO4-201ENST00000298966 GAGE2AQ6NT46 116 aa12.53□□□□□ -0.4
SMCO4-201ENST00000298966 DSCR8Q96T75 97 aa12.53□□□□□ -0.4
SMCO4-201ENST00000298966 TRBV7-4A0A0J9YYF1 115 aa12.51□□□□□ -0.41
SMCO4-201ENST00000298966 A0A1B0GV72 72 aa12.51□□□□□ -0.41
SMCO4-201ENST00000298966 CCKP06307 115 aa12.51□□□□□ -0.41
SMCO4-201ENST00000298966 LCE2DQ5TA82 110 aaPredicted RBP12.5□□□□□ -0.41
SMCO4-201ENST00000298966 Q6ZQT0 140 aa12.5□□□□□ -0.41
SMCO4-201ENST00000298966 SMIM29Q86T20 159 aa12.5□□□□□ -0.41
SMCO4-201ENST00000298966 PRR26Q8N8Z3 221 aa12.49□□□□□ -0.41
SMCO4-201ENST00000298966 IGLV8-61A0A075B6I0 122 aa12.48□□□□□ -0.41
SMCO4-201ENST00000298966 FAT4Q6V0I7 4981 aa12.47□□□□□ -0.41
SMCO4-201ENST00000298966 KRTAP9-6A0A140TA67 174 aa12.46□□□□□ -0.41
SMCO4-201ENST00000298966 C3orf22Q8N5N4 141 aa12.46□□□□□ -0.41
SMCO4-201ENST00000298966 Q6JHZ5 121 aa12.45□□□□□ -0.42
SMCO4-201ENST00000298966 PRR4Q16378 134 aa12.44□□□□□ -0.42
SMCO4-201ENST00000298966 VPS25Q9BRG1 176 aa12.44□□□□□ -0.42
SMCO4-201ENST00000298966 FAM229BQ4G0N7 80 aa12.43□□□□□ -0.42
SMCO4-201ENST00000298966 CDIP1Q9H305 208 aa12.43□□□□□ -0.42
SMCO4-201ENST00000298966 A0A1B0GW54 56 aa12.42□□□□□ -0.42
SMCO4-201ENST00000298966 Q8NBF4 154 aa12.37□□□□□ -0.43
SMCO4-201ENST00000298966 LCE2AQ5TA79 106 aaPredicted RBP12.34□□□□□ -0.43
SMCO4-201ENST00000298966 C9orf153Q5TBE3 101 aa12.33□□□□□ -0.44
SMCO4-201ENST00000298966 IGFL1Q6UW32 110 aa12.33□□□□□ -0.44
SMCO4-201ENST00000298966 LINC00846Q9NV44 126 aa12.33□□□□□ -0.44
SMCO4-201ENST00000298966 SSBP3-AS1Q7Z2R9 100 aa12.32□□□□□ -0.44
SMCO4-201ENST00000298966 IGLV9-49A0A0B4J1Y8 123 aa12.31□□□□□ -0.44
SMCO4-201ENST00000298966 Q6Q795 121 aa12.31□□□□□ -0.44
SMCO4-201ENST00000298966 A0A1W2PNM2 257 aa12.3□□□□□ -0.44
SMCO4-201ENST00000298966 KRTAP1-4P0C5Y4 121 aa12.3□□□□□ -0.44
SMCO4-201ENST00000298966 CRYGAP11844 174 aa12.3□□□□□ -0.44
SMCO4-201ENST00000298966 LINC00643Q86TS7 51 aa12.29□□□□□ -0.44
SMCO4-201ENST00000298966 MOBPQ13875 183 aa12.28□□□□□ -0.44
SMCO4-201ENST00000298966 UBL5Q9BZL1 73 aa12.27□□□□□ -0.45
SMCO4-201ENST00000298966 SIGMAR1Q99720 223 aa12.26□□□□□ -0.45
SMCO4-201ENST00000298966 ANAPC11Q9NYG5 84 aa12.26□□□□□ -0.45
SMCO4-201ENST00000298966 CD164Q04900 197 aa12.23□□□□□ -0.45
SMCO4-201ENST00000298966 MT-ATP8P03928 68 aa12.21□□□□□ -0.45
SMCO4-201ENST00000298966 A0A087X002 238 aa12.2□□□□□ -0.46
SMCO4-201ENST00000298966 Q6ZVQ6 151 aa12.2□□□□□ -0.46
SMCO4-201ENST00000298966 TRBV7-7A0A0K0K1E9 115 aa12.19□□□□□ -0.46
SMCO4-201ENST00000298966 ATP5EP2Q5VTU8 51 aa12.19□□□□□ -0.46
SMCO4-201ENST00000298966 A0A0G2JQZ4 141 aa12.17□□□□□ -0.46
SMCO4-201ENST00000298966 KRTAP13-2Q52LG2 175 aa12.17□□□□□ -0.46
SMCO4-201ENST00000298966 SS18L2Q9UHA2 77 aa12.16□□□□□ -0.46
SMCO4-201ENST00000298966 TYMSOSQ8TAI1 123 aa12.15□□□□□ -0.46
SMCO4-201ENST00000298966 NREPQ16612 68 aa12.14□□□□□ -0.47
SMCO4-201ENST00000298966 IMUPQ9GZP8 106 aa12.13□□□□□ -0.47
SMCO4-201ENST00000298966 A0A087WSZ3 146 aa12.12□□□□□ -0.47
SMCO4-201ENST00000298966 MUC17Q685J3 4493 aa12.1□□□□□ -0.47
SMCO4-201ENST00000298966 CXCL6P80162 114 aa12.1□□□□□ -0.47
SMCO4-201ENST00000298966 SPAG11AQ6PDA7 123 aa12.1□□□□□ -0.47
SMCO4-201ENST00000298966 C4orf48Q5BLP8 95 aa12.09□□□□□ -0.47
SMCO4-201ENST00000298966 IGKV3D-7A0A0C4DH55 119 aa12.07□□□□□ -0.48
SMCO4-201ENST00000298966 RPS29P62273 56 aaKnown RBP12.06□□□□□ -0.48
SMCO4-201ENST00000298966 Q5XG85 94 aa12.06□□□□□ -0.48
SMCO4-201ENST00000298966 SPINK1P00995 79 aa12.05□□□□□ -0.48
SMCO4-201ENST00000298966 LIMD2Q9BT23 127 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms