RNA–Protein interactions for RNA: ENST00000297668.10

CNTNAP3-201, Transcript of contactin associated protein like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTNAP3, Length 5,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-201ENST00000297668 NBEAL1Q6ZS30 2694 aa10.43□□□□□ -0.74
CNTNAP3-201ENST00000297668 LUZP6Q538Z0 58 aa10.43□□□□□ -0.74
CNTNAP3-201ENST00000297668 SPRR1AP35321 89 aa10.42□□□□□ -0.74
CNTNAP3-201ENST00000297668 TEX15Q9BXT5 2789 aa10.41□□□□□ -0.74
CNTNAP3-201ENST00000297668 C5orf42Q9H799 3197 aa10.41□□□□□ -0.74
CNTNAP3-201ENST00000297668 MMP24-AS1A0A0U1RRL7 71 aa10.41□□□□□ -0.74
CNTNAP3-201ENST00000297668 NOTCH1P46531 2555 aa10.39□□□□□ -0.75
CNTNAP3-201ENST00000297668 LINC01558Q9Y6Z2 57 aa10.39□□□□□ -0.75
CNTNAP3-201ENST00000297668 A0A1B0GU33 70 aa10.38□□□□□ -0.75
CNTNAP3-201ENST00000297668 SETXQ7Z333 2677 aaKnown RBP10.37□□□□□ -0.75
CNTNAP3-201ENST00000297668 CSAG1Q6PB30 78 aa10.36□□□□□ -0.75
CNTNAP3-201ENST00000297668 Q6ZSA8 131 aa10.35□□□□□ -0.75
CNTNAP3-201ENST00000297668 PLAC8Q9NZF1 115 aa10.33□□□□□ -0.76
CNTNAP3-201ENST00000297668 UNC79Q9P2D8 2635 aa10.33□□□□□ -0.76
CNTNAP3-201ENST00000297668 CFAP54Q96N23 3096 aa10.32□□□□□ -0.76
CNTNAP3-201ENST00000297668 SPRR1BP22528 89 aa10.3□□□□□ -0.76
CNTNAP3-201ENST00000297668 GCN1Q92616 2671 aaKnown RBP10.3□□□□□ -0.76
CNTNAP3-201ENST00000297668 MKI67P46013 3256 aaKnown RBP10.3□□□□□ -0.76
CNTNAP3-201ENST00000297668 LINC00472Q9H8W2 130 aa10.29□□□□□ -0.76
CNTNAP3-201ENST00000297668 COL6A5A8TX70 2615 aa10.29□□□□□ -0.76
CNTNAP3-201ENST00000297668 A0A0A0MQY5 61 aa10.29□□□□□ -0.76
CNTNAP3-201ENST00000297668 ZCCHC13Q8WW36 166 aaKnown RBP10.28□□□□□ -0.76
CNTNAP3-201ENST00000297668 MGAQ8IWI9 3026 aa10.26□□□□□ -0.77
CNTNAP3-201ENST00000297668 DMAC1Q96GE9 116 aa10.25□□□□□ -0.77
CNTNAP3-201ENST00000297668 CHD9Q3L8U1 2897 aa10.25□□□□□ -0.77
CNTNAP3-201ENST00000297668 CAMK2N1Q7Z7J9 78 aa10.24□□□□□ -0.77
CNTNAP3-201ENST00000297668 Q5W150 140 aa10.22□□□□□ -0.77
CNTNAP3-201ENST00000297668 SPINK7P58062 85 aa10.21□□□□□ -0.77
CNTNAP3-201ENST00000297668 HTTP42858 3142 aa10.2□□□□□ -0.78
CNTNAP3-201ENST00000297668 ZNF292O60281 2723 aa10.18□□□□□ -0.78
CNTNAP3-201ENST00000297668 RANBP2P49792 3224 aaKnown RBP10.18□□□□□ -0.78
CNTNAP3-201ENST00000297668 KRTAP26-1Q6PEX3 210 aa10.17□□□□□ -0.78
CNTNAP3-201ENST00000297668 KRTAP1-5Q9BYS1 174 aa10.17□□□□□ -0.78
CNTNAP3-201ENST00000297668 ASB16-AS1Q495Z4 193 aa10.17□□□□□ -0.78
CNTNAP3-201ENST00000297668 KRTAP16-1A8MUX0 517 aa10.16□□□□□ -0.78
CNTNAP3-201ENST00000297668 MAP1AP78559 2803 aaPredicted RBP10.15□□□□□ -0.78
CNTNAP3-201ENST00000297668 UNC80Q8N2C7 3258 aa10.13□□□□□ -0.79
CNTNAP3-201ENST00000297668 DMBT1Q9UGM3 2413 aaPredicted RBP10.12□□□□□ -0.79
CNTNAP3-201ENST00000297668 STAB2Q8WWQ8 2551 aa10.1□□□□□ -0.79
CNTNAP3-201ENST00000297668 NBEAL2Q6ZNJ1 2754 aa10.1□□□□□ -0.79
CNTNAP3-201ENST00000297668 S4R3F8 94 aa10.09□□□□□ -0.79
CNTNAP3-201ENST00000297668 UBR5O95071 2799 aaPredicted RBP10.08□□□□□ -0.8
CNTNAP3-201ENST00000297668 LINC00483Q53H64 154 aa10.05□□□□□ -0.8
CNTNAP3-201ENST00000297668 M0R2T5 61 aa10.04□□□□□ -0.8
CNTNAP3-201ENST00000297668 A6NN06 94 aa10.04□□□□□ -0.8
CNTNAP3-201ENST00000297668 WDFY4Q6ZS81 3184 aa10.03□□□□□ -0.8
CNTNAP3-201ENST00000297668 XIRP2A4UGR9 3374 aa10.01□□□□□ -0.81
CNTNAP3-201ENST00000297668 KRTAP4-16G5E9R7 235 aaPredicted RBP9.99□□□□□ -0.81
CNTNAP3-201ENST00000297668 TRANK1O15050 2925 aa9.99□□□□□ -0.81
CNTNAP3-201ENST00000297668 R4GN34 69 aa9.98□□□□□ -0.81
CNTNAP3-201ENST00000297668 DSPP15924 2871 aaKnown RBP9.98□□□□□ -0.81
CNTNAP3-201ENST00000297668 KRTAP10-1P60331 282 aa9.96□□□□□ -0.81
CNTNAP3-201ENST00000297668 CDH23Q9H251 3354 aa9.96□□□□□ -0.82
CNTNAP3-201ENST00000297668 BAHCC1Q9P281 2608 aa9.95□□□□□ -0.82
CNTNAP3-201ENST00000297668 NSD1Q96L73 2696 aaPredicted RBP9.94□□□□□ -0.82
CNTNAP3-201ENST00000297668 Q6ZR54 194 aa9.93□□□□□ -0.82
CNTNAP3-201ENST00000297668 KRTAP29-1A8MX34 341 aaPredicted RBP9.93□□□□□ -0.82
CNTNAP3-201ENST00000297668 KRTAP10-2P60368 255 aa9.93□□□□□ -0.82
CNTNAP3-201ENST00000297668 RPL37P61927 97 aaKnown RBP9.93□□□□□ -0.82
CNTNAP3-201ENST00000297668 PANO1I0J062 215 aa9.91□□□□□ -0.82
CNTNAP3-201ENST00000297668 DNAH14Q0VDD8 3507 aa9.9□□□□□ -0.82
CNTNAP3-201ENST00000297668 SEC61BP60468 96 aaKnown RBP9.9□□□□□ -0.83
CNTNAP3-201ENST00000297668 IGSF10Q6WRI0 2623 aa9.88□□□□□ -0.83
CNTNAP3-201ENST00000297668 Q5VSD8 79 aa9.87□□□□□ -0.83
CNTNAP3-201ENST00000297668 ROMO1P60602 79 aa9.86□□□□□ -0.83
CNTNAP3-201ENST00000297668 H1FX-AS1Q4G0G2 97 aa9.85□□□□□ -0.83
CNTNAP3-201ENST00000297668 VCANP13611 3396 aa9.84□□□□□ -0.83
CNTNAP3-201ENST00000297668 FRYQ5TBA9 3013 aa9.83□□□□□ -0.84
CNTNAP3-201ENST00000297668 TRIOO75962 3097 aa9.83□□□□□ -0.84
CNTNAP3-201ENST00000297668 PRUNE2Q8WUY3 3088 aa9.83□□□□□ -0.84
CNTNAP3-201ENST00000297668 LCE6AA0A183 80 aa9.82□□□□□ -0.84
CNTNAP3-201ENST00000297668 A0A087X002 238 aa9.79□□□□□ -0.84
CNTNAP3-201ENST00000297668 M0QZ58 72 aa9.78□□□□□ -0.84
CNTNAP3-201ENST00000297668 ITPR1Q14643 2758 aa9.76□□□□□ -0.85
CNTNAP3-201ENST00000297668 SPATA8Q6RVD6 105 aa9.76□□□□□ -0.85
CNTNAP3-201ENST00000297668 VPS13AQ96RL7 3174 aa9.75□□□□□ -0.85
CNTNAP3-201ENST00000297668 NOTCH2NLQ7Z3S9 236 aa9.75□□□□□ -0.85
CNTNAP3-201ENST00000297668 SPEGQ15772 3267 aa9.75□□□□□ -0.85
CNTNAP3-201ENST00000297668 ADM2Q7Z4H4 148 aa9.75□□□□□ -0.85
CNTNAP3-201ENST00000297668 KRTAP25-1Q3LHN0 102 aa9.74□□□□□ -0.85
CNTNAP3-201ENST00000297668 A8MU10 97 aa9.73□□□□□ -0.85
CNTNAP3-201ENST00000297668 ITPR2Q14571 2701 aa9.72□□□□□ -0.85
CNTNAP3-201ENST00000297668 USP34Q70CQ2 3546 aa9.72□□□□□ -0.85
CNTNAP3-201ENST00000297668 NDUFAF8A1L188 74 aa9.71□□□□□ -0.86
CNTNAP3-201ENST00000297668 FREM2Q5SZK8 3169 aa9.71□□□□□ -0.86
CNTNAP3-201ENST00000297668 SZT2Q5T011 3432 aa9.69□□□□□ -0.86
CNTNAP3-201ENST00000297668 KRTAP11-1Q8IUC1 163 aa9.68□□□□□ -0.86
CNTNAP3-201ENST00000297668 TACC2O95359 2948 aa9.67□□□□□ -0.86
CNTNAP3-201ENST00000297668 FLNCQ14315 2725 aa9.62□□□□□ -0.87
CNTNAP3-201ENST00000297668 KRTAP7-1Q8IUC3 87 aa9.62□□□□□ -0.87
CNTNAP3-201ENST00000297668 LAMA1P25391 3075 aa9.61□□□□□ -0.87
CNTNAP3-201ENST00000297668 KALRNO60229 2985 aa9.61□□□□□ -0.87
CNTNAP3-201ENST00000297668 DMXL2Q8TDJ6 3036 aa9.61□□□□□ -0.87
CNTNAP3-201ENST00000297668 Q6ZRN7 208 aaPredicted RBP9.6□□□□□ -0.87
CNTNAP3-201ENST00000297668 MYO15AQ9UKN7 3530 aa9.59□□□□□ -0.87
CNTNAP3-201ENST00000297668 EYSQ5T1H1 3165 aa9.58□□□□□ -0.88
CNTNAP3-201ENST00000297668 ASH1LQ9NR48 2969 aaKnown RBP9.55□□□□□ -0.88
CNTNAP3-201ENST00000297668 NBEAQ8NFP9 2946 aa9.55□□□□□ -0.88
CNTNAP3-201ENST00000297668 UTP20O75691 2785 aaKnown RBP9.55□□□□□ -0.88
CNTNAP3-201ENST00000297668 RPS29P62273 56 aaKnown RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms