RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 SPINK7P58062 85 aa10.31□□□□□ -0.76
SH3RF1-201ENST00000284637 MKI67P46013 3256 aaKnown RBP10.3□□□□□ -0.76
SH3RF1-201ENST00000284637 GCN1Q92616 2671 aaKnown RBP10.29□□□□□ -0.76
SH3RF1-201ENST00000284637 NOTCH1P46531 2555 aa10.29□□□□□ -0.76
SH3RF1-201ENST00000284637 WDFY4Q6ZS81 3184 aa10.28□□□□□ -0.76
SH3RF1-201ENST00000284637 UNC79Q9P2D8 2635 aa10.27□□□□□ -0.76
SH3RF1-201ENST00000284637 NBEAL1Q6ZS30 2694 aa10.27□□□□□ -0.77
SH3RF1-201ENST00000284637 TEX15Q9BXT5 2789 aa10.26□□□□□ -0.77
SH3RF1-201ENST00000284637 BRCA2P51587 3418 aa10.26□□□□□ -0.77
SH3RF1-201ENST00000284637 HRES1P13985 223 aa10.26□□□□□ -0.77
SH3RF1-201ENST00000284637 CSAG1Q6PB30 78 aa10.25□□□□□ -0.77
SH3RF1-201ENST00000284637 MMP24-AS1A0A0U1RRL7 71 aa10.23□□□□□ -0.77
SH3RF1-201ENST00000284637 COX6B2Q6YFQ2 88 aa10.23□□□□□ -0.77
SH3RF1-201ENST00000284637 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.23□□□□□ -0.77
SH3RF1-201ENST00000284637 TEP1Q99973 2627 aaKnown RBP10.21□□□□□ -0.78
SH3RF1-201ENST00000284637 FREM2Q5SZK8 3169 aa10.18□□□□□ -0.78
SH3RF1-201ENST00000284637 J3QL48 77 aa10.18□□□□□ -0.78
SH3RF1-201ENST00000284637 SPRR1AP35321 89 aa10.17□□□□□ -0.78
SH3RF1-201ENST00000284637 ZCCHC13Q8WW36 166 aaKnown RBP10.16□□□□□ -0.78
SH3RF1-201ENST00000284637 TRIOO75962 3097 aa10.16□□□□□ -0.78
SH3RF1-201ENST00000284637 TNP2Q05952 138 aa10.15□□□□□ -0.78
SH3RF1-201ENST00000284637 ASB16-AS1Q495Z4 193 aa10.15□□□□□ -0.78
SH3RF1-201ENST00000284637 NBEAL2Q6ZNJ1 2754 aa10.15□□□□□ -0.78
SH3RF1-201ENST00000284637 FLG2Q5D862 2391 aaPredicted RBP10.14□□□□□ -0.79
SH3RF1-201ENST00000284637 TRANK1O15050 2925 aa10.13□□□□□ -0.79
SH3RF1-201ENST00000284637 A0A1B0GU33 70 aa10.13□□□□□ -0.79
SH3RF1-201ENST00000284637 UNC80Q8N2C7 3258 aa10.12□□□□□ -0.79
SH3RF1-201ENST00000284637 XIRP2A4UGR9 3374 aa10.12□□□□□ -0.79
SH3RF1-201ENST00000284637 LINC00472Q9H8W2 130 aa10.11□□□□□ -0.79
SH3RF1-201ENST00000284637 PRUNE2Q8WUY3 3088 aa10.11□□□□□ -0.79
SH3RF1-201ENST00000284637 COL6A5A8TX70 2615 aa10.1□□□□□ -0.79
SH3RF1-201ENST00000284637 ZNF292O60281 2723 aa10.09□□□□□ -0.79
SH3RF1-201ENST00000284637 VPS13AQ96RL7 3174 aa10.09□□□□□ -0.79
SH3RF1-201ENST00000284637 FRYQ5TBA9 3013 aa10.09□□□□□ -0.79
SH3RF1-201ENST00000284637 A6NN06 94 aa10.08□□□□□ -0.8
SH3RF1-201ENST00000284637 SETXQ7Z333 2677 aaKnown RBP10.06□□□□□ -0.8
SH3RF1-201ENST00000284637 DMAC1Q96GE9 116 aa10.05□□□□□ -0.8
SH3RF1-201ENST00000284637 DSPP15924 2871 aaKnown RBP10.03□□□□□ -0.8
SH3RF1-201ENST00000284637 LUZP6Q538Z0 58 aa10.02□□□□□ -0.81
SH3RF1-201ENST00000284637 SPRR1BP22528 89 aa10□□□□□ -0.81
SH3RF1-201ENST00000284637 Q5W150 140 aa10□□□□□ -0.81
SH3RF1-201ENST00000284637 UBR5O95071 2799 aaPredicted RBP10□□□□□ -0.81
SH3RF1-201ENST00000284637 KRTAP29-1A8MX34 341 aaPredicted RBP9.98□□□□□ -0.81
SH3RF1-201ENST00000284637 LCE6AA0A183 80 aa9.98□□□□□ -0.81
SH3RF1-201ENST00000284637 KRTAP26-1Q6PEX3 210 aa9.98□□□□□ -0.81
SH3RF1-201ENST00000284637 PLAC8Q9NZF1 115 aa9.97□□□□□ -0.81
SH3RF1-201ENST00000284637 KRTAP1-5Q9BYS1 174 aa9.96□□□□□ -0.82
SH3RF1-201ENST00000284637 Q6ZR54 194 aa9.92□□□□□ -0.82
SH3RF1-201ENST00000284637 DMBT1Q9UGM3 2413 aaPredicted RBP9.91□□□□□ -0.82
SH3RF1-201ENST00000284637 Q6ZSA8 131 aa9.91□□□□□ -0.82
SH3RF1-201ENST00000284637 CELSR3Q9NYQ7 3312 aa9.91□□□□□ -0.82
SH3RF1-201ENST00000284637 A8MU10 97 aa9.89□□□□□ -0.83
SH3RF1-201ENST00000284637 STAB2Q8WWQ8 2551 aa9.89□□□□□ -0.83
SH3RF1-201ENST00000284637 SPATA8Q6RVD6 105 aa9.89□□□□□ -0.83
SH3RF1-201ENST00000284637 NBEAQ8NFP9 2946 aa9.89□□□□□ -0.83
SH3RF1-201ENST00000284637 KALRNO60229 2985 aa9.87□□□□□ -0.83
SH3RF1-201ENST00000284637 CAMK2N1Q7Z7J9 78 aa9.86□□□□□ -0.83
SH3RF1-201ENST00000284637 KRTAP4-16G5E9R7 235 aaPredicted RBP9.83□□□□□ -0.84
SH3RF1-201ENST00000284637 A0A0A0MQY5 61 aa9.82□□□□□ -0.84
SH3RF1-201ENST00000284637 NSD1Q96L73 2696 aaPredicted RBP9.81□□□□□ -0.84
SH3RF1-201ENST00000284637 BAHCC1Q9P281 2608 aa9.81□□□□□ -0.84
SH3RF1-201ENST00000284637 DMXL2Q8TDJ6 3036 aa9.8□□□□□ -0.84
SH3RF1-201ENST00000284637 CDH23Q9H251 3354 aa9.78□□□□□ -0.84
SH3RF1-201ENST00000284637 ROMO1P60602 79 aa9.77□□□□□ -0.85
SH3RF1-201ENST00000284637 ADM2Q7Z4H4 148 aa9.77□□□□□ -0.85
SH3RF1-201ENST00000284637 TACC2O95359 2948 aa9.76□□□□□ -0.85
SH3RF1-201ENST00000284637 S4R3F8 94 aa9.76□□□□□ -0.85
SH3RF1-201ENST00000284637 IGSF10Q6WRI0 2623 aa9.76□□□□□ -0.85
SH3RF1-201ENST00000284637 ASH1LQ9NR48 2969 aaKnown RBP9.75□□□□□ -0.85
SH3RF1-201ENST00000284637 PANO1I0J062 215 aa9.74□□□□□ -0.85
SH3RF1-201ENST00000284637 ITPR1Q14643 2758 aa9.73□□□□□ -0.85
SH3RF1-201ENST00000284637 RPL37P61927 97 aaKnown RBP9.71□□□□□ -0.85
SH3RF1-201ENST00000284637 KRTAP16-1A8MUX0 517 aa9.7□□□□□ -0.86
SH3RF1-201ENST00000284637 KRTAP25-1Q3LHN0 102 aa9.7□□□□□ -0.86
SH3RF1-201ENST00000284637 LINC00483Q53H64 154 aa9.69□□□□□ -0.86
SH3RF1-201ENST00000284637 VCANP13611 3396 aa9.69□□□□□ -0.86
SH3RF1-201ENST00000284637 A0A087X002 238 aa9.68□□□□□ -0.86
SH3RF1-201ENST00000284637 H1FX-AS1Q4G0G2 97 aa9.67□□□□□ -0.86
SH3RF1-201ENST00000284637 LAMA1P25391 3075 aa9.66□□□□□ -0.86
SH3RF1-201ENST00000284637 ATMQ13315 3056 aa9.66□□□□□ -0.86
SH3RF1-201ENST00000284637 NOTCH2NLQ7Z3S9 236 aa9.66□□□□□ -0.86
SH3RF1-201ENST00000284637 KRTAP10-2P60368 255 aa9.65□□□□□ -0.86
SH3RF1-201ENST00000284637 KRTAP10-1P60331 282 aa9.65□□□□□ -0.86
SH3RF1-201ENST00000284637 R4GN34 69 aa9.64□□□□□ -0.87
SH3RF1-201ENST00000284637 ADGRG4Q8IZF6 3080 aa9.63□□□□□ -0.87
SH3RF1-201ENST00000284637 FLNCQ14315 2725 aa9.63□□□□□ -0.87
SH3RF1-201ENST00000284637 DNAH14Q0VDD8 3507 aa9.6□□□□□ -0.87
SH3RF1-201ENST00000284637 BOD1L1Q8NFC6 3051 aa9.58□□□□□ -0.88
SH3RF1-201ENST00000284637 KRTAP11-1Q8IUC1 163 aa9.58□□□□□ -0.88
SH3RF1-201ENST00000284637 M0R2T5 61 aa9.58□□□□□ -0.88
SH3RF1-201ENST00000284637 COL12A1Q99715 3063 aa9.57□□□□□ -0.88
SH3RF1-201ENST00000284637 UTP20O75691 2785 aaKnown RBP9.56□□□□□ -0.88
SH3RF1-201ENST00000284637 ITPR2Q14571 2701 aa9.56□□□□□ -0.88
SH3RF1-201ENST00000284637 APCP25054 2843 aa9.54□□□□□ -0.88
SH3RF1-201ENST00000284637 FRYLO94915 3013 aa9.54□□□□□ -0.88
SH3RF1-201ENST00000284637 LRBAP50851 2863 aa9.53□□□□□ -0.88
SH3RF1-201ENST00000284637 HIVEP1P15822 2718 aa9.53□□□□□ -0.88
SH3RF1-201ENST00000284637 REV3LO60673 3130 aa9.53□□□□□ -0.88
SH3RF1-201ENST00000284637 KRTAP7-1Q8IUC3 87 aa9.52□□□□□ -0.89
SH3RF1-201ENST00000284637 SZT2Q5T011 3432 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms