RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 XP32Q5T750 250 aa1.93□□□□□ -2.1
HERC4-201ENST00000277817 Q6JHZ5 121 aa1.93□□□□□ -2.1
HERC4-201ENST00000277817 SBSPONQ8IVN8 264 aa1.93□□□□□ -2.1
HERC4-201ENST00000277817 DHRS4-AS1Q9P1J3 65 aa1.93□□□□□ -2.1
HERC4-201ENST00000277817 KRTAP19-4Q3LI73 84 aa1.93□□□□□ -2.1
HERC4-201ENST00000277817 HRCT1Q6UXD1 115 aa1.93□□□□□ -2.1
HERC4-201ENST00000277817 WFDC13Q8IUB5 93 aa1.93□□□□□ -2.1
HERC4-201ENST00000277817 HYDINQ4G0P3 5121 aa1.93□□□□□ -2.1
HERC4-201ENST00000277817 STARD9Q9P2P6 4700 aa1.93□□□□□ -2.1
HERC4-201ENST00000277817 TACC2O95359 2948 aa1.93□□□□□ -2.1
HERC4-201ENST00000277817 LRCOL1A6NCL2 159 aa1.93□□□□□ -2.1
HERC4-201ENST00000277817 NDUFC2O95298 119 aa1.93□□□□□ -2.1
HERC4-201ENST00000277817 RPS28P62857 69 aaKnown RBP1.93□□□□□ -2.1
HERC4-201ENST00000277817 LOC107984640A0A0U1RRK4 108 aa1.92□□□□□ -2.1
HERC4-201ENST00000277817 NDUFC2-KCTD14E9PQ53 114 aa1.92□□□□□ -2.1
HERC4-201ENST00000277817 IGKV4-1P06312 121 aa1.92□□□□□ -2.1
HERC4-201ENST00000277817 LINC00575Q6W349 94 aa1.92□□□□□ -2.1
HERC4-201ENST00000277817 MUC7Q8TAX7 377 aa1.92□□□□□ -2.1
HERC4-201ENST00000277817 BRK1Q8WUW1 75 aa1.92□□□□□ -2.1
HERC4-201ENST00000277817 LRBAP50851 2863 aa1.92□□□□□ -2.1
HERC4-201ENST00000277817 KRTAP9-7A8MTY7 169 aa1.92□□□□□ -2.1
HERC4-201ENST00000277817 REG3GQ6UW15 175 aa1.92□□□□□ -2.1
HERC4-201ENST00000277817 FAM19A3Q7Z5A8 133 aa1.92□□□□□ -2.1
HERC4-201ENST00000277817 LINC01600Q96MT4 127 aa1.92□□□□□ -2.1
HERC4-201ENST00000277817 LITAFQ99732 161 aa1.92□□□□□ -2.1
HERC4-201ENST00000277817 C1orf137Q5JT78 98 aa1.92□□□□□ -2.1
HERC4-201ENST00000277817 MUC17Q685J3 4493 aa1.92□□□□□ -2.1
HERC4-201ENST00000277817 ESRGQ1W209 222 aa1.91□□□□□ -2.1
HERC4-201ENST00000277817 SPINK6Q6UWN8 80 aa1.91□□□□□ -2.1
HERC4-201ENST00000277817 CHKB-CPT1BH3BT56 60 aa1.91□□□□□ -2.1
HERC4-201ENST00000277817 CHTF8P0CG12 524 aa1.91□□□□□ -2.1
HERC4-201ENST00000277817 DEFB116Q30KQ4 102 aa1.91□□□□□ -2.1
HERC4-201ENST00000277817 LCE3BQ5TA77 95 aa1.91□□□□□ -2.1
HERC4-201ENST00000277817 EPPK1P58107 5090 aaKnown RBP1.91□□□□□ -2.1
HERC4-201ENST00000277817 LINC00313P59037 77 aa1.91□□□□□ -2.1
HERC4-201ENST00000277817 Q8N9L7 120 aa1.91□□□□□ -2.1
HERC4-201ENST00000277817 DNAH5Q8TE73 4624 aa1.91□□□□□ -2.1
HERC4-201ENST00000277817 LINC01547P58512 204 aaPredicted RBP1.91□□□□□ -2.1
HERC4-201ENST00000277817 TM2D3Q9BRN9 247 aa1.91□□□□□ -2.1
HERC4-201ENST00000277817 MEGF8Q7Z7M0 2845 aa1.9□□□□□ -2.1
HERC4-201ENST00000277817 COL12A1Q99715 3063 aa1.9□□□□□ -2.1
HERC4-201ENST00000277817 TRAV7A0A075B6U4 112 aa1.9□□□□□ -2.1
HERC4-201ENST00000277817 C6orf48Q9UBA6 75 aa1.9□□□□□ -2.1
HERC4-201ENST00000277817 TRBV7-7A0A0K0K1E9 115 aa1.9□□□□□ -2.11
HERC4-201ENST00000277817 NDUFC1O43677 76 aa1.9□□□□□ -2.11
HERC4-201ENST00000277817 NBEAL2Q6ZNJ1 2754 aa1.9□□□□□ -2.11
HERC4-201ENST00000277817 RYR1P21817 5038 aa1.9□□□□□ -2.11
HERC4-201ENST00000277817 LY6G6CO95867 125 aa1.9□□□□□ -2.11
HERC4-201ENST00000277817 MRPL55Q7Z7F7 128 aaKnown RBP1.9□□□□□ -2.11
HERC4-201ENST00000277817 PRLHP81277 87 aa1.89□□□□□ -2.11
HERC4-201ENST00000277817 PMAIP1Q13794 54 aa1.89□□□□□ -2.11
HERC4-201ENST00000277817 SPTSSBQ8NFR3 76 aa1.89□□□□□ -2.11
HERC4-201ENST00000277817 C22orf24Q9Y442 160 aa1.89□□□□□ -2.11
HERC4-201ENST00000277817 PCLOQ9Y6V0 5065 aa1.89□□□□□ -2.11
HERC4-201ENST00000277817 A0A087WSZ3 146 aa1.89□□□□□ -2.11
HERC4-201ENST00000277817 KRTAP15-1Q3LI76 137 aa1.89□□□□□ -2.11
HERC4-201ENST00000277817 TEX15Q9BXT5 2789 aa1.89□□□□□ -2.11
HERC4-201ENST00000277817 KRTAP5-3Q6L8H2 238 aa1.89□□□□□ -2.11
HERC4-201ENST00000277817 Q8NAQ8 132 aa1.89□□□□□ -2.11
HERC4-201ENST00000277817 LINC00208Q96KT6 92 aa1.89□□□□□ -2.11
HERC4-201ENST00000277817 Q8N377 158 aa1.89□□□□□ -2.11
HERC4-201ENST00000277817 LINC00167Q96N53 147 aa1.89□□□□□ -2.11
HERC4-201ENST00000277817 Q9BRP9 147 aa1.89□□□□□ -2.11
HERC4-201ENST00000277817 LINC00474Q9P2X8 69 aa1.89□□□□□ -2.11
HERC4-201ENST00000277817 KRTAP24-1Q3LI83 254 aa1.88□□□□□ -2.11
HERC4-201ENST00000277817 LINC01556Q5JQF7 62 aa1.88□□□□□ -2.11
HERC4-201ENST00000277817 KRTAP4-5Q9BYR2 181 aa1.88□□□□□ -2.11
HERC4-201ENST00000277817 CXCL6P80162 114 aa1.88□□□□□ -2.11
HERC4-201ENST00000277817 CRYBG3Q68DQ2 2970 aa1.88□□□□□ -2.11
HERC4-201ENST00000277817 SMCR5Q8TEV8 140 aa1.88□□□□□ -2.11
HERC4-201ENST00000277817 KRTAP4-11Q9BYQ6 195 aa1.88□□□□□ -2.11
HERC4-201ENST00000277817 APOBP04114 4563 aaKnown RBP1.88□□□□□ -2.11
HERC4-201ENST00000277817 TMEM254Q8TBM7 123 aa1.88□□□□□ -2.11
HERC4-201ENST00000277817 CELSR2Q9HCU4 2923 aa1.88□□□□□ -2.11
HERC4-201ENST00000277817 IGLV8-61A0A075B6I0 122 aa1.87□□□□□ -2.11
HERC4-201ENST00000277817 SMIM26A0A096LP01 95 aa1.87□□□□□ -2.11
HERC4-201ENST00000277817 Q6ZQT0 140 aa1.87□□□□□ -2.11
HERC4-201ENST00000277817 Q8NBF4 154 aa1.87□□□□□ -2.11
HERC4-201ENST00000277817 KIAA1109Q2LD37 5005 aa1.87□□□□□ -2.11
HERC4-201ENST00000277817 KRTAP10-3P60369 221 aa1.87□□□□□ -2.11
HERC4-201ENST00000277817 CIRBP-AS1Q8TBR5 109 aa1.87□□□□□ -2.11
HERC4-201ENST00000277817 ZNF706Q9Y5V0 76 aaPredicted RBP1.87□□□□□ -2.11
HERC4-201ENST00000277817 ATP5EP56381 51 aaPredicted RBP1.87□□□□□ -2.11
HERC4-201ENST00000277817 ELOF1P60002 83 aaKnown RBP1.87□□□□□ -2.11
HERC4-201ENST00000277817 CASC2Q6XLA1 102 aa1.87□□□□□ -2.11
HERC4-201ENST00000277817 ST20-AS1Q8NBB2 130 aa1.87□□□□□ -2.11
HERC4-201ENST00000277817 SERP1Q9Y6X1 66 aa1.87□□□□□ -2.11
HERC4-201ENST00000277817 NUPR2A6NF83 97 aa1.87□□□□□ -2.11
HERC4-201ENST00000277817 CRYGAP11844 174 aa1.87□□□□□ -2.11
HERC4-201ENST00000277817 PCOTHQ58A44 107 aa1.87□□□□□ -2.11
HERC4-201ENST00000277817 LINC00588Q9Y4M8 146 aa1.87□□□□□ -2.11
HERC4-201ENST00000277817 DCHS2Q6V1P9 2916 aa1.86□□□□□ -2.11
HERC4-201ENST00000277817 FAM168BA1KXE4 195 aa1.86□□□□□ -2.11
HERC4-201ENST00000277817 H3BNG1 76 aa1.86□□□□□ -2.11
HERC4-201ENST00000277817 C9orf129Q5T035 196 aaKnown RBP1.86□□□□□ -2.11
HERC4-201ENST00000277817 ABCA13Q86UQ4 5058 aa1.86□□□□□ -2.11
HERC4-201ENST00000277817 IGLV6-57P01721 117 aa1.86□□□□□ -2.11
HERC4-201ENST00000277817 LOC110117498A0A087WWA1 95 aa1.86□□□□□ -2.11
HERC4-201ENST00000277817 TRBV7-6A0A0J9YX20 115 aa1.86□□□□□ -2.11
HERC4-201ENST00000277817 A0A1B0GVX0 72 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 176 ms