RNA–Protein interactions for RNA: ENST00000277549.9

CACNA1B-201, Transcript of calcium voltage-gated channel subunit alpha1 B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1B, Length 7,158 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1B-201ENST00000277549 FLNBO75369 2602 aaKnown RBP12.09□□□□□ -0.47
CACNA1B-201ENST00000277549 FP248Q71RG6 208 aaPredicted RBP12.09□□□□□ -0.47
CACNA1B-201ENST00000277549 RPL37P61927 97 aaKnown RBP12.09□□□□□ -0.47
CACNA1B-201ENST00000277549 H3BS24 57 aa12.07□□□□□ -0.48
CACNA1B-201ENST00000277549 OXTP01178 125 aa12.07□□□□□ -0.48
CACNA1B-201ENST00000277549 LINC01558Q9Y6Z2 57 aa12.07□□□□□ -0.48
CACNA1B-201ENST00000277549 EPG5Q9HCE0 2579 aa12.06□□□□□ -0.48
CACNA1B-201ENST00000277549 HECTD1Q9ULT8 2610 aa12.02□□□□□ -0.49
CACNA1B-201ENST00000277549 PANO1I0J062 215 aa12.01□□□□□ -0.49
CACNA1B-201ENST00000277549 KRTAP26-1Q6PEX3 210 aa12.01□□□□□ -0.49
CACNA1B-201ENST00000277549 LINC00472Q9H8W2 130 aa11.99□□□□□ -0.49
CACNA1B-201ENST00000277549 C20orf166-AS1Q96NR2 134 aa11.99□□□□□ -0.49
CACNA1B-201ENST00000277549 Q6ZR54 194 aa11.98□□□□□ -0.49
CACNA1B-201ENST00000277549 Q5VV11 94 aa11.95□□□□□ -0.5
CACNA1B-201ENST00000277549 CEP350Q5VT06 3117 aa11.95□□□□□ -0.5
CACNA1B-201ENST00000277549 A0A087X002 238 aa11.94□□□□□ -0.5
CACNA1B-201ENST00000277549 FLG2Q5D862 2391 aaPredicted RBP11.93□□□□□ -0.5
CACNA1B-201ENST00000277549 CYSTM1Q9H1C7 97 aa11.93□□□□□ -0.5
CACNA1B-201ENST00000277549 SPRR1AP35321 89 aa11.91□□□□□ -0.5
CACNA1B-201ENST00000277549 ATRQ13535 2644 aa11.82□□□□□ -0.52
CACNA1B-201ENST00000277549 MAST4O15021 2626 aa11.82□□□□□ -0.52
CACNA1B-201ENST00000277549 A8MUU9 505 aa11.8□□□□□ -0.52
CACNA1B-201ENST00000277549 A8MU10 97 aa11.78□□□□□ -0.52
CACNA1B-201ENST00000277549 Q5XG85 94 aa11.77□□□□□ -0.53
CACNA1B-201ENST00000277549 SPRR1BP22528 89 aa11.75□□□□□ -0.53
CACNA1B-201ENST00000277549 A0A1B0GVY2 172 aa11.75□□□□□ -0.53
CACNA1B-201ENST00000277549 NOTCH2NLQ7Z3S9 236 aa11.75□□□□□ -0.53
CACNA1B-201ENST00000277549 PRRC2CQ9Y520 2896 aaKnown RBP11.75□□□□□ -0.53
CACNA1B-201ENST00000277549 PCNTO95613 3336 aa11.73□□□□□ -0.53
CACNA1B-201ENST00000277549 XIRP2A4UGR9 3374 aa11.69□□□□□ -0.54
CACNA1B-201ENST00000277549 HELZ2Q9BYK8 2649 aaKnown RBP11.65□□□□□ -0.55
CACNA1B-201ENST00000277549 ITPR3Q14573 2671 aa11.65□□□□□ -0.55
CACNA1B-201ENST00000277549 FLNAP21333 2647 aaKnown RBP11.63□□□□□ -0.55
CACNA1B-201ENST00000277549 KRTAP11-1Q8IUC1 163 aa11.58□□□□□ -0.56
CACNA1B-201ENST00000277549 C10orf95Q9H7T3 257 aa11.58□□□□□ -0.56
CACNA1B-201ENST00000277549 CFAP46Q8IYW2 2715 aa11.58□□□□□ -0.56
CACNA1B-201ENST00000277549 MKI67P46013 3256 aaKnown RBP11.51□□□□□ -0.57
CACNA1B-201ENST00000277549 STAB1Q9NY15 2570 aa11.49□□□□□ -0.57
CACNA1B-201ENST00000277549 KRTAP10-8P60410 259 aa11.44□□□□□ -0.58
CACNA1B-201ENST00000277549 TNP1P09430 55 aa11.39□□□□□ -0.59
CACNA1B-201ENST00000277549 KRTAP16-1A8MUX0 517 aa11.37□□□□□ -0.59
CACNA1B-201ENST00000277549 AKAP13Q12802 2813 aa11.37□□□□□ -0.59
CACNA1B-201ENST00000277549 KRTAP13-2Q52LG2 175 aa11.36□□□□□ -0.59
CACNA1B-201ENST00000277549 KRTAP4-16G5E9R7 235 aaPredicted RBP11.35□□□□□ -0.59
CACNA1B-201ENST00000277549 CFAP54Q96N23 3096 aa11.35□□□□□ -0.59
CACNA1B-201ENST00000277549 CELSR3Q9NYQ7 3312 aa11.32□□□□□ -0.6
CACNA1B-201ENST00000277549 TEX15Q9BXT5 2789 aa11.32□□□□□ -0.6
CACNA1B-201ENST00000277549 SETXQ7Z333 2677 aaKnown RBP11.31□□□□□ -0.6
CACNA1B-201ENST00000277549 KRTAP25-1Q3LHN0 102 aa11.3□□□□□ -0.6
CACNA1B-201ENST00000277549 KRTAP29-1A8MX34 341 aaPredicted RBP11.3□□□□□ -0.6
CACNA1B-201ENST00000277549 NDUFAF8A1L188 74 aa11.29□□□□□ -0.6
CACNA1B-201ENST00000277549 BRCA2P51587 3418 aa11.29□□□□□ -0.6
CACNA1B-201ENST00000277549 A0A0C4DFX4 3053 aa11.27□□□□□ -0.61
CACNA1B-201ENST00000277549 Q6ZRN7 208 aaPredicted RBP11.24□□□□□ -0.61
CACNA1B-201ENST00000277549 TEP1Q99973 2627 aaKnown RBP11.22□□□□□ -0.61
CACNA1B-201ENST00000277549 NBEAL1Q6ZS30 2694 aa11.17□□□□□ -0.62
CACNA1B-201ENST00000277549 LAMA3Q16787 3333 aa11.16□□□□□ -0.62
CACNA1B-201ENST00000277549 CHD6Q8TD26 2715 aa11.16□□□□□ -0.62
CACNA1B-201ENST00000277549 KRTAP7-1Q8IUC3 87 aa11.14□□□□□ -0.63
CACNA1B-201ENST00000277549 KRTAP10-10P60014 251 aa11.14□□□□□ -0.63
CACNA1B-201ENST00000277549 RPS29P62273 56 aaKnown RBP11.14□□□□□ -0.63
CACNA1B-201ENST00000277549 FREM2Q5SZK8 3169 aa11.13□□□□□ -0.63
CACNA1B-201ENST00000277549 CENPEQ02224 2701 aa11.11□□□□□ -0.63
CACNA1B-201ENST00000277549 TRIOO75962 3097 aa11.1□□□□□ -0.63
CACNA1B-201ENST00000277549 SZT2Q5T011 3432 aa11.1□□□□□ -0.63
CACNA1B-201ENST00000277549 DMBT1Q9UGM3 2413 aaPredicted RBP11.1□□□□□ -0.63
CACNA1B-201ENST00000277549 LAMA2P24043 3122 aaKnown RBP11.1□□□□□ -0.63
CACNA1B-201ENST00000277549 UNC80Q8N2C7 3258 aa11.09□□□□□ -0.63
CACNA1B-201ENST00000277549 BAHCC1Q9P281 2608 aa11.08□□□□□ -0.64
CACNA1B-201ENST00000277549 CRYBG3Q68DQ2 2970 aa11.06□□□□□ -0.64
CACNA1B-201ENST00000277549 PRUNE2Q8WUY3 3088 aa11.05□□□□□ -0.64
CACNA1B-201ENST00000277549 DNAH14Q0VDD8 3507 aa11.05□□□□□ -0.64
CACNA1B-201ENST00000277549 UNC79Q9P2D8 2635 aa11.04□□□□□ -0.64
CACNA1B-201ENST00000277549 ASB16-AS1Q495Z4 193 aa11.04□□□□□ -0.64
CACNA1B-201ENST00000277549 CDH23Q9H251 3354 aa11.03□□□□□ -0.64
CACNA1B-201ENST00000277549 RANBP2P49792 3224 aaKnown RBP10.96□□□□□ -0.66
CACNA1B-201ENST00000277549 MGAQ8IWI9 3026 aa10.93□□□□□ -0.66
CACNA1B-201ENST00000277549 CHD7Q9P2D1 2997 aa10.93□□□□□ -0.66
CACNA1B-201ENST00000277549 FRYQ5TBA9 3013 aa10.92□□□□□ -0.66
CACNA1B-201ENST00000277549 XP32Q5T750 250 aa10.92□□□□□ -0.66
CACNA1B-201ENST00000277549 A6NN06 94 aa10.92□□□□□ -0.66
CACNA1B-201ENST00000277549 COL6A5A8TX70 2615 aa10.91□□□□□ -0.66
CACNA1B-201ENST00000277549 COL6A3P12111 3177 aa10.91□□□□□ -0.66
CACNA1B-201ENST00000277549 STAB2Q8WWQ8 2551 aa10.89□□□□□ -0.67
CACNA1B-201ENST00000277549 KRTAP13-1Q8IUC0 172 aa10.87□□□□□ -0.67
CACNA1B-201ENST00000277549 P0C880 135 aa10.84□□□□□ -0.67
CACNA1B-201ENST00000277549 WDFY4Q6ZS81 3184 aa10.84□□□□□ -0.67
CACNA1B-201ENST00000277549 CFAP47Q6ZTR5 3102 aa10.8□□□□□ -0.68
CACNA1B-201ENST00000277549 REV3LO60673 3130 aa10.8□□□□□ -0.68
CACNA1B-201ENST00000277549 PRO2289Q9P1D8 64 aa10.76□□□□□ -0.69
CACNA1B-201ENST00000277549 VPS13AQ96RL7 3174 aa10.76□□□□□ -0.69
CACNA1B-201ENST00000277549 VCANP13611 3396 aa10.74□□□□□ -0.69
CACNA1B-201ENST00000277549 NOTCH1P46531 2555 aa10.73□□□□□ -0.69
CACNA1B-201ENST00000277549 SPEGQ15772 3267 aa10.72□□□□□ -0.69
CACNA1B-201ENST00000277549 ITPR2Q14571 2701 aa10.68□□□□□ -0.7
CACNA1B-201ENST00000277549 GCN1Q92616 2671 aaKnown RBP10.67□□□□□ -0.7
CACNA1B-201ENST00000277549 ZNF292O60281 2723 aa10.59□□□□□ -0.71
CACNA1B-201ENST00000277549 NBEAL2Q6ZNJ1 2754 aa10.59□□□□□ -0.71
CACNA1B-201ENST00000277549 KRTAP21-3Q3LHN1 58 aa10.57□□□□□ -0.72
CACNA1B-201ENST00000277549 KRTAP1-4P0C5Y4 121 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms