RNA–Protein interactions for RNA: ENST00000263102.6

CCDC6-201, Transcript of coiled-coil domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC6, Length 5,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-201ENST00000263102 ROMO1P60602 79 aa8.88□□□□□ -0.99
CCDC6-201ENST00000263102 LAMA2P24043 3122 aaKnown RBP8.87□□□□□ -0.99
CCDC6-201ENST00000263102 FP248Q71RG6 208 aaPredicted RBP8.87□□□□□ -0.99
CCDC6-201ENST00000263102 MGAM2Q2M2H8 2515 aa8.87□□□□□ -0.99
CCDC6-201ENST00000263102 SPATA8Q6RVD6 105 aa8.87□□□□□ -0.99
CCDC6-201ENST00000263102 C5orf42Q9H799 3197 aa8.85□□□□□ -0.99
CCDC6-201ENST00000263102 HECTD1Q9ULT8 2610 aa8.84□□□□□ -0.99
CCDC6-201ENST00000263102 LINC01558Q9Y6Z2 57 aa8.84□□□□□ -0.99
CCDC6-201ENST00000263102 LAMA3Q16787 3333 aa8.83□□□□□ -1
CCDC6-201ENST00000263102 USP24Q9UPU5 2620 aa8.8□□□□□ -1
CCDC6-201ENST00000263102 Q8NDZ9 215 aa8.79□□□□□ -1
CCDC6-201ENST00000263102 RANBP2P49792 3224 aaKnown RBP8.79□□□□□ -1
CCDC6-201ENST00000263102 C20orf166-AS1Q96NR2 134 aa8.78□□□□□ -1
CCDC6-201ENST00000263102 MKI67P46013 3256 aaKnown RBP8.78□□□□□ -1
CCDC6-201ENST00000263102 LINC00472Q9H8W2 130 aa8.78□□□□□ -1
CCDC6-201ENST00000263102 Q6ZR54 194 aa8.76□□□□□ -1.01
CCDC6-201ENST00000263102 SPRR1AP35321 89 aa8.75□□□□□ -1.01
CCDC6-201ENST00000263102 KRTAP26-1Q6PEX3 210 aa8.75□□□□□ -1.01
CCDC6-201ENST00000263102 UNC80Q8N2C7 3258 aa8.73□□□□□ -1.01
CCDC6-201ENST00000263102 PANO1I0J062 215 aa8.71□□□□□ -1.02
CCDC6-201ENST00000263102 FLNBO75369 2602 aaKnown RBP8.7□□□□□ -1.02
CCDC6-201ENST00000263102 A0A087X002 238 aa8.7□□□□□ -1.02
CCDC6-201ENST00000263102 SPRR1BP22528 89 aa8.7□□□□□ -1.02
CCDC6-201ENST00000263102 CFAP54Q96N23 3096 aa8.7□□□□□ -1.02
CCDC6-201ENST00000263102 A8MUU9 505 aa8.68□□□□□ -1.02
CCDC6-201ENST00000263102 H3BS24 57 aa8.68□□□□□ -1.02
CCDC6-201ENST00000263102 BPTFQ12830 3046 aa8.64□□□□□ -1.03
CCDC6-201ENST00000263102 Q5VV11 94 aa8.64□□□□□ -1.03
CCDC6-201ENST00000263102 EPG5Q9HCE0 2579 aa8.62□□□□□ -1.03
CCDC6-201ENST00000263102 CHD7Q9P2D1 2997 aa8.61□□□□□ -1.03
CCDC6-201ENST00000263102 XIRP2A4UGR9 3374 aa8.59□□□□□ -1.03
CCDC6-201ENST00000263102 HTTP42858 3142 aa8.57□□□□□ -1.04
CCDC6-201ENST00000263102 PRUNE2Q8WUY3 3088 aa8.55□□□□□ -1.04
CCDC6-201ENST00000263102 CDH23Q9H251 3354 aa8.55□□□□□ -1.04
CCDC6-201ENST00000263102 FLG2Q5D862 2391 aaPredicted RBP8.54□□□□□ -1.04
CCDC6-201ENST00000263102 A8MU10 97 aa8.51□□□□□ -1.05
CCDC6-201ENST00000263102 ATRQ13535 2644 aa8.5□□□□□ -1.05
CCDC6-201ENST00000263102 A0A1B0GVY2 172 aa8.5□□□□□ -1.05
CCDC6-201ENST00000263102 FREM2Q5SZK8 3169 aa8.5□□□□□ -1.05
CCDC6-201ENST00000263102 NOTCH2NLQ7Z3S9 236 aa8.48□□□□□ -1.05
CCDC6-201ENST00000263102 CYSTM1Q9H1C7 97 aa8.46□□□□□ -1.05
CCDC6-201ENST00000263102 C10orf95Q9H7T3 257 aa8.45□□□□□ -1.06
CCDC6-201ENST00000263102 TNP1P09430 55 aa8.44□□□□□ -1.06
CCDC6-201ENST00000263102 VPS13AQ96RL7 3174 aa8.44□□□□□ -1.06
CCDC6-201ENST00000263102 TRIOO75962 3097 aa8.43□□□□□ -1.06
CCDC6-201ENST00000263102 Q5XG85 94 aa8.42□□□□□ -1.06
CCDC6-201ENST00000263102 MAST4O15021 2626 aa8.42□□□□□ -1.06
CCDC6-201ENST00000263102 KRTAP10-8P60410 259 aa8.42□□□□□ -1.06
CCDC6-201ENST00000263102 FLNAP21333 2647 aaKnown RBP8.4□□□□□ -1.07
CCDC6-201ENST00000263102 WDFY4Q6ZS81 3184 aa8.37□□□□□ -1.07
CCDC6-201ENST00000263102 ITPR3Q14573 2671 aa8.37□□□□□ -1.07
CCDC6-201ENST00000263102 DNAH14Q0VDD8 3507 aa8.36□□□□□ -1.07
CCDC6-201ENST00000263102 CELSR3Q9NYQ7 3312 aa8.36□□□□□ -1.07
CCDC6-201ENST00000263102 KRTAP11-1Q8IUC1 163 aa8.35□□□□□ -1.07
CCDC6-201ENST00000263102 HELZ2Q9BYK8 2649 aaKnown RBP8.33□□□□□ -1.08
CCDC6-201ENST00000263102 RPS29P62273 56 aaKnown RBP8.33□□□□□ -1.08
CCDC6-201ENST00000263102 STAB1Q9NY15 2570 aa8.32□□□□□ -1.08
CCDC6-201ENST00000263102 MAP1AP78559 2803 aaPredicted RBP8.32□□□□□ -1.08
CCDC6-201ENST00000263102 VCANP13611 3396 aa8.32□□□□□ -1.08
CCDC6-201ENST00000263102 CHD9Q3L8U1 2897 aa8.31□□□□□ -1.08
CCDC6-201ENST00000263102 KRTAP13-2Q52LG2 175 aa8.31□□□□□ -1.08
CCDC6-201ENST00000263102 KRTAP16-1A8MUX0 517 aa8.3□□□□□ -1.08
CCDC6-201ENST00000263102 NBEAQ8NFP9 2946 aa8.29□□□□□ -1.08
CCDC6-201ENST00000263102 CENPEQ02224 2701 aa8.28□□□□□ -1.08
CCDC6-201ENST00000263102 KRTAP4-16G5E9R7 235 aaPredicted RBP8.28□□□□□ -1.08
CCDC6-201ENST00000263102 SPEGQ15772 3267 aa8.26□□□□□ -1.09
CCDC6-201ENST00000263102 CFAP46Q8IYW2 2715 aa8.25□□□□□ -1.09
CCDC6-201ENST00000263102 Q6ZRN7 208 aaPredicted RBP8.25□□□□□ -1.09
CCDC6-201ENST00000263102 KRTAP29-1A8MX34 341 aaPredicted RBP8.24□□□□□ -1.09
CCDC6-201ENST00000263102 KRTAP10-10P60014 251 aa8.23□□□□□ -1.09
CCDC6-201ENST00000263102 TRANK1O15050 2925 aa8.23□□□□□ -1.09
CCDC6-201ENST00000263102 KRTAP25-1Q3LHN0 102 aa8.22□□□□□ -1.09
CCDC6-201ENST00000263102 LAMA1P25391 3075 aa8.21□□□□□ -1.1
CCDC6-201ENST00000263102 ASB16-AS1Q495Z4 193 aa8.18□□□□□ -1.1
CCDC6-201ENST00000263102 SZT2Q5T011 3432 aa8.18□□□□□ -1.1
CCDC6-201ENST00000263102 DMBT1Q9UGM3 2413 aaPredicted RBP8.18□□□□□ -1.1
CCDC6-201ENST00000263102 MGAQ8IWI9 3026 aa8.17□□□□□ -1.1
CCDC6-201ENST00000263102 DSPP15924 2871 aaKnown RBP8.17□□□□□ -1.1
CCDC6-201ENST00000263102 NDUFAF8A1L188 74 aa8.16□□□□□ -1.1
CCDC6-201ENST00000263102 FRYQ5TBA9 3013 aa8.1□□□□□ -1.11
CCDC6-201ENST00000263102 P0C880 135 aa8.09□□□□□ -1.11
CCDC6-201ENST00000263102 NBEAL1Q6ZS30 2694 aa8.09□□□□□ -1.11
CCDC6-201ENST00000263102 FRYLO94915 3013 aa8.09□□□□□ -1.11
CCDC6-201ENST00000263102 SETXQ7Z333 2677 aaKnown RBP8.07□□□□□ -1.12
CCDC6-201ENST00000263102 KRTAP21-3Q3LHN1 58 aa8.07□□□□□ -1.12
CCDC6-201ENST00000263102 PRO2289Q9P1D8 64 aa8.06□□□□□ -1.12
CCDC6-201ENST00000263102 KRTAP7-1Q8IUC3 87 aa8.05□□□□□ -1.12
CCDC6-201ENST00000263102 XP32Q5T750 250 aa8.04□□□□□ -1.12
CCDC6-201ENST00000263102 AKAP13Q12802 2813 aa8.04□□□□□ -1.12
CCDC6-201ENST00000263102 TEX15Q9BXT5 2789 aa8.02□□□□□ -1.13
CCDC6-201ENST00000263102 STAB2Q8WWQ8 2551 aa8.01□□□□□ -1.13
CCDC6-201ENST00000263102 TEP1Q99973 2627 aaKnown RBP7.99□□□□□ -1.13
CCDC6-201ENST00000263102 COL6A3P12111 3177 aa7.99□□□□□ -1.13
CCDC6-201ENST00000263102 MYO15AQ9UKN7 3530 aa7.97□□□□□ -1.13
CCDC6-201ENST00000263102 KRTAP13-1Q8IUC0 172 aa7.96□□□□□ -1.13
CCDC6-201ENST00000263102 BOD1L1Q8NFC6 3051 aa7.96□□□□□ -1.13
CCDC6-201ENST00000263102 CFAP47Q6ZTR5 3102 aa7.96□□□□□ -1.14
CCDC6-201ENST00000263102 BAHCC1Q9P281 2608 aa7.93□□□□□ -1.14
CCDC6-201ENST00000263102 KALRNO60229 2985 aa7.91□□□□□ -1.14
CCDC6-201ENST00000263102 EYSQ5T1H1 3165 aa7.9□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms