RNA–Protein interactions for RNA: ENST00000261590.12

DSG2-201, Transcript of desmoglein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DSG2, Length 5,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSG2-201ENST00000261590 PLAC4Q8WY50 150 aa13.35□□□□□ -0.27
DSG2-201ENST00000261590 KRTAP16-1A8MUX0 517 aa13.35□□□□□ -0.27
DSG2-201ENST00000261590 ASB16-AS1Q495Z4 193 aa13.33□□□□□ -0.28
DSG2-201ENST00000261590 ADM2Q7Z4H4 148 aa13.31□□□□□ -0.28
DSG2-201ENST00000261590 EP400Q96L91 3159 aa13.3□□□□□ -0.28
DSG2-201ENST00000261590 Q6ZR54 194 aa13.22□□□□□ -0.29
DSG2-201ENST00000261590 Q5VSD8 79 aa13.21□□□□□ -0.3
DSG2-201ENST00000261590 EPG5Q9HCE0 2579 aa13.16□□□□□ -0.3
DSG2-201ENST00000261590 BPTFQ12830 3046 aa13.16□□□□□ -0.3
DSG2-201ENST00000261590 KRTAP1-5Q9BYS1 174 aa13.13□□□□□ -0.31
DSG2-201ENST00000261590 PANO1I0J062 215 aa13.11□□□□□ -0.31
DSG2-201ENST00000261590 PRRC2CQ9Y520 2896 aaKnown RBP13.1□□□□□ -0.31
DSG2-201ENST00000261590 ATRQ13535 2644 aa13.09□□□□□ -0.31
DSG2-201ENST00000261590 KRTAP10-1P60331 282 aa13.08□□□□□ -0.32
DSG2-201ENST00000261590 KRTAP25-1Q3LHN0 102 aa13.08□□□□□ -0.32
DSG2-201ENST00000261590 C20orf166-AS1Q96NR2 134 aa13.07□□□□□ -0.32
DSG2-201ENST00000261590 HECTD1Q9ULT8 2610 aa13.07□□□□□ -0.32
DSG2-201ENST00000261590 KRTAP29-1A8MX34 341 aaPredicted RBP13.07□□□□□ -0.32
DSG2-201ENST00000261590 FLNBO75369 2602 aaKnown RBP13.05□□□□□ -0.32
DSG2-201ENST00000261590 KRTAP10-2P60368 255 aa13□□□□□ -0.33
DSG2-201ENST00000261590 A6NN06 94 aa12.96□□□□□ -0.33
DSG2-201ENST00000261590 A8MU10 97 aa12.96□□□□□ -0.34
DSG2-201ENST00000261590 MAST4O15021 2626 aa12.96□□□□□ -0.34
DSG2-201ENST00000261590 NDUFAF8A1L188 74 aa12.93□□□□□ -0.34
DSG2-201ENST00000261590 KRTAP4-16G5E9R7 235 aaPredicted RBP12.91□□□□□ -0.34
DSG2-201ENST00000261590 DMBT1Q9UGM3 2413 aaPredicted RBP12.88□□□□□ -0.35
DSG2-201ENST00000261590 GOLGB1Q14789 3259 aaKnown RBP12.88□□□□□ -0.35
DSG2-201ENST00000261590 A0A087X002 238 aa12.88□□□□□ -0.35
DSG2-201ENST00000261590 NOTCH2NLQ7Z3S9 236 aa12.88□□□□□ -0.35
DSG2-201ENST00000261590 STAB1Q9NY15 2570 aa12.85□□□□□ -0.35
DSG2-201ENST00000261590 A8MUU9 505 aa12.84□□□□□ -0.35
DSG2-201ENST00000261590 LCE6AA0A183 80 aa12.83□□□□□ -0.36
DSG2-201ENST00000261590 FLNAP21333 2647 aaKnown RBP12.81□□□□□ -0.36
DSG2-201ENST00000261590 NBEAL1Q6ZS30 2694 aa12.7□□□□□ -0.38
DSG2-201ENST00000261590 ITPR3Q14573 2671 aa12.69□□□□□ -0.38
DSG2-201ENST00000261590 C10orf95Q9H7T3 257 aa12.64□□□□□ -0.39
DSG2-201ENST00000261590 TNP1P09430 55 aa12.59□□□□□ -0.39
DSG2-201ENST00000261590 RPS29P62273 56 aaKnown RBP12.59□□□□□ -0.39
DSG2-201ENST00000261590 STAB2Q8WWQ8 2551 aa12.56□□□□□ -0.4
DSG2-201ENST00000261590 KRTAP11-1Q8IUC1 163 aa12.53□□□□□ -0.4
DSG2-201ENST00000261590 AKAP13Q12802 2813 aa12.51□□□□□ -0.41
DSG2-201ENST00000261590 DNAH12Q6ZR08 3092 aa12.49□□□□□ -0.41
DSG2-201ENST00000261590 CEP350Q5VT06 3117 aa12.49□□□□□ -0.41
DSG2-201ENST00000261590 CFAP46Q8IYW2 2715 aa12.46□□□□□ -0.42
DSG2-201ENST00000261590 HELZ2Q9BYK8 2649 aaKnown RBP12.42□□□□□ -0.42
DSG2-201ENST00000261590 CENPEQ02224 2701 aa12.39□□□□□ -0.43
DSG2-201ENST00000261590 KRTAP13-2Q52LG2 175 aa12.38□□□□□ -0.43
DSG2-201ENST00000261590 CHD6Q8TD26 2715 aa12.37□□□□□ -0.43
DSG2-201ENST00000261590 KRTAP7-1Q8IUC3 87 aa12.33□□□□□ -0.44
DSG2-201ENST00000261590 NOTCH1P46531 2555 aa12.27□□□□□ -0.45
DSG2-201ENST00000261590 Q6ZRN7 208 aaPredicted RBP12.27□□□□□ -0.45
DSG2-201ENST00000261590 UNC79Q9P2D8 2635 aa12.25□□□□□ -0.45
DSG2-201ENST00000261590 PP632Q6XCG6 107 aa12.23□□□□□ -0.45
DSG2-201ENST00000261590 KRTAP13-1Q8IUC0 172 aa12.23□□□□□ -0.45
DSG2-201ENST00000261590 TEX15Q9BXT5 2789 aa12.2□□□□□ -0.46
DSG2-201ENST00000261590 TEP1Q99973 2627 aaKnown RBP12.17□□□□□ -0.46
DSG2-201ENST00000261590 GCN1Q92616 2671 aaKnown RBP12.14□□□□□ -0.47
DSG2-201ENST00000261590 KRTAP10-8P60410 259 aa12.12□□□□□ -0.47
DSG2-201ENST00000261590 C5orf42Q9H799 3197 aa12.08□□□□□ -0.48
DSG2-201ENST00000261590 UTRNP46939 3433 aa12.04□□□□□ -0.48
DSG2-201ENST00000261590 CFAP54Q96N23 3096 aa12.02□□□□□ -0.48
DSG2-201ENST00000261590 PCNTO95613 3336 aa12.02□□□□□ -0.49
DSG2-201ENST00000261590 SETXQ7Z333 2677 aaKnown RBP12.02□□□□□ -0.49
DSG2-201ENST00000261590 P0C880 135 aa12.01□□□□□ -0.49
DSG2-201ENST00000261590 CHD7Q9P2D1 2997 aa11.99□□□□□ -0.49
DSG2-201ENST00000261590 COL6A5A8TX70 2615 aa11.96□□□□□ -0.49
DSG2-201ENST00000261590 H0YAA0 97 aa11.9□□□□□ -0.5
DSG2-201ENST00000261590 A0A1B0GVY2 172 aa11.89□□□□□ -0.51
DSG2-201ENST00000261590 NBEAL2Q6ZNJ1 2754 aa11.87□□□□□ -0.51
DSG2-201ENST00000261590 A0A0C4DFX4 3053 aa11.84□□□□□ -0.51
DSG2-201ENST00000261590 MGAQ8IWI9 3026 aa11.82□□□□□ -0.52
DSG2-201ENST00000261590 MAP1AP78559 2803 aaPredicted RBP11.8□□□□□ -0.52
DSG2-201ENST00000261590 XP32Q5T750 250 aa11.78□□□□□ -0.52
DSG2-201ENST00000261590 RANBP2P49792 3224 aaKnown RBP11.77□□□□□ -0.53
DSG2-201ENST00000261590 BAHCC1Q9P281 2608 aa11.75□□□□□ -0.53
DSG2-201ENST00000261590 LAMA2P24043 3122 aaKnown RBP11.75□□□□□ -0.53
DSG2-201ENST00000261590 NSD1Q96L73 2696 aaPredicted RBP11.68□□□□□ -0.54
DSG2-201ENST00000261590 CHD9Q3L8U1 2897 aa11.67□□□□□ -0.54
DSG2-201ENST00000261590 ZNF292O60281 2723 aa11.64□□□□□ -0.55
DSG2-201ENST00000261590 WDFY4Q6ZS81 3184 aa11.64□□□□□ -0.55
DSG2-201ENST00000261590 PRO2289Q9P1D8 64 aa11.62□□□□□ -0.55
DSG2-201ENST00000261590 KRTAP10-10P60014 251 aa11.62□□□□□ -0.55
DSG2-201ENST00000261590 UBR5O95071 2799 aaPredicted RBP11.61□□□□□ -0.55
DSG2-201ENST00000261590 IGSF10Q6WRI0 2623 aa11.6□□□□□ -0.55
DSG2-201ENST00000261590 KRTAP1-4P0C5Y4 121 aa11.59□□□□□ -0.55
DSG2-201ENST00000261590 LAMA3Q16787 3333 aa11.51□□□□□ -0.57
DSG2-201ENST00000261590 DSPP15924 2871 aaKnown RBP11.48□□□□□ -0.57
DSG2-201ENST00000261590 HTTP42858 3142 aa11.46□□□□□ -0.57
DSG2-201ENST00000261590 FREM2Q5SZK8 3169 aa11.45□□□□□ -0.58
DSG2-201ENST00000261590 TPRXLQ17RH7 258 aa11.45□□□□□ -0.58
DSG2-201ENST00000261590 TRIOO75962 3097 aa11.43□□□□□ -0.58
DSG2-201ENST00000261590 KMT2BQ9UMN6 2715 aaPredicted RBP11.42□□□□□ -0.58
DSG2-201ENST00000261590 FRYQ5TBA9 3013 aa11.4□□□□□ -0.58
DSG2-201ENST00000261590 MKI67P46013 3256 aaKnown RBP11.39□□□□□ -0.59
DSG2-201ENST00000261590 TRANK1O15050 2925 aa11.34□□□□□ -0.59
DSG2-201ENST00000261590 PRUNE2Q8WUY3 3088 aa11.34□□□□□ -0.59
DSG2-201ENST00000261590 ITPR2Q14571 2701 aa11.33□□□□□ -0.6
DSG2-201ENST00000261590 BRCA2P51587 3418 aa11.32□□□□□ -0.6
DSG2-201ENST00000261590 APCP25054 2843 aa11.31□□□□□ -0.6
DSG2-201ENST00000261590 VPS13AQ96RL7 3174 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms