RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 A0A096LNT2 108 aa3.06□□□□□ -1.92
RC3H1-201ENST00000258349 A0A0G2JQZ4 141 aa3.06□□□□□ -1.92
RC3H1-201ENST00000258349 A0A1W2PNN7 141 aa3.06□□□□□ -1.92
RC3H1-201ENST00000258349 LINC01554Q52M75 96 aa3.06□□□□□ -1.92
RC3H1-201ENST00000258349 A0A1B0GU33 70 aa3.05□□□□□ -1.92
RC3H1-201ENST00000258349 ZNF575Q86XF7 245 aa3.04□□□□□ -1.92
RC3H1-201ENST00000258349 FAM229BQ4G0N7 80 aa3.04□□□□□ -1.92
RC3H1-201ENST00000258349 ANAPC11Q9NYG5 84 aa3.04□□□□□ -1.92
RC3H1-201ENST00000258349 IGSF10Q6WRI0 2623 aa3.04□□□□□ -1.92
RC3H1-201ENST00000258349 FRYQ5TBA9 3013 aa3.04□□□□□ -1.92
RC3H1-201ENST00000258349 VPS13AQ96RL7 3174 aa3.04□□□□□ -1.92
RC3H1-201ENST00000258349 Q5XG85 94 aa3.03□□□□□ -1.92
RC3H1-201ENST00000258349 DMAC1Q96GE9 116 aa3.03□□□□□ -1.92
RC3H1-201ENST00000258349 UBR5O95071 2799 aaPredicted RBP3.02□□□□□ -1.93
RC3H1-201ENST00000258349 KRTAP10-3P60369 221 aa3.02□□□□□ -1.93
RC3H1-201ENST00000258349 PRR26Q8N8Z3 221 aa3.02□□□□□ -1.93
RC3H1-201ENST00000258349 HRES1P13985 223 aa3.02□□□□□ -1.93
RC3H1-201ENST00000258349 LINC01558Q9Y6Z2 57 aa3.02□□□□□ -1.93
RC3H1-201ENST00000258349 TACC2O95359 2948 aa3.01□□□□□ -1.93
RC3H1-201ENST00000258349 S4R3F8 94 aa3.01□□□□□ -1.93
RC3H1-201ENST00000258349 FRYLO94915 3013 aa3.01□□□□□ -1.93
RC3H1-201ENST00000258349 USP34Q70CQ2 3546 aa3.01□□□□□ -1.93
RC3H1-201ENST00000258349 Q8N9P0 234 aaPredicted RBP3.01□□□□□ -1.93
RC3H1-201ENST00000258349 KALRNO60229 2985 aa3□□□□□ -1.93
RC3H1-201ENST00000258349 CASC10Q5T4H9 136 aa3□□□□□ -1.93
RC3H1-201ENST00000258349 Q5VV11 94 aa3□□□□□ -1.93
RC3H1-201ENST00000258349 CHD9Q3L8U1 2897 aa3□□□□□ -1.93
RC3H1-201ENST00000258349 FLNCQ14315 2725 aa2.99□□□□□ -1.93
RC3H1-201ENST00000258349 H3BS24 57 aa2.99□□□□□ -1.93
RC3H1-201ENST00000258349 ZCCHC13Q8WW36 166 aaKnown RBP2.99□□□□□ -1.93
RC3H1-201ENST00000258349 FP248Q71RG6 208 aaPredicted RBP2.99□□□□□ -1.93
RC3H1-201ENST00000258349 REV3LO60673 3130 aa2.99□□□□□ -1.93
RC3H1-201ENST00000258349 TRIOO75962 3097 aa2.99□□□□□ -1.93
RC3H1-201ENST00000258349 MMP24-AS1A0A0U1RRL7 71 aa2.98□□□□□ -1.93
RC3H1-201ENST00000258349 ASB16-AS1Q495Z4 193 aa2.98□□□□□ -1.93
RC3H1-201ENST00000258349 A0A0A0MQY5 61 aa2.98□□□□□ -1.93
RC3H1-201ENST00000258349 Q6ZSA8 131 aa2.98□□□□□ -1.93
RC3H1-201ENST00000258349 CAMK2N1Q7Z7J9 78 aa2.98□□□□□ -1.93
RC3H1-201ENST00000258349 SMR3BP02814 79 aaPredicted RBP2.98□□□□□ -1.93
RC3H1-201ENST00000258349 CSAG1Q6PB30 78 aa2.97□□□□□ -1.93
RC3H1-201ENST00000258349 Q5W150 140 aa2.97□□□□□ -1.93
RC3H1-201ENST00000258349 KRTAP1-3Q8IUG1 177 aa2.97□□□□□ -1.93
RC3H1-201ENST00000258349 XIRP2A4UGR9 3374 aa2.96□□□□□ -1.94
RC3H1-201ENST00000258349 SPRR1AP35321 89 aa2.96□□□□□ -1.94
RC3H1-201ENST00000258349 CYSTM1Q9H1C7 97 aa2.96□□□□□ -1.94
RC3H1-201ENST00000258349 LINC00472Q9H8W2 130 aa2.96□□□□□ -1.94
RC3H1-201ENST00000258349 PLAC8Q9NZF1 115 aa2.96□□□□□ -1.94
RC3H1-201ENST00000258349 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.95□□□□□ -1.94
RC3H1-201ENST00000258349 ROMO1P60602 79 aa2.95□□□□□ -1.94
RC3H1-201ENST00000258349 MKI67P46013 3256 aaKnown RBP2.95□□□□□ -1.94
RC3H1-201ENST00000258349 WDFY4Q6ZS81 3184 aa2.94□□□□□ -1.94
RC3H1-201ENST00000258349 TNP2Q05952 138 aa2.94□□□□□ -1.94
RC3H1-201ENST00000258349 SPINK7P58062 85 aa2.94□□□□□ -1.94
RC3H1-201ENST00000258349 KRTAP1-1Q07627 177 aa2.94□□□□□ -1.94
RC3H1-201ENST00000258349 Q6ZR54 194 aa2.93□□□□□ -1.94
RC3H1-201ENST00000258349 SPRR1BP22528 89 aa2.93□□□□□ -1.94
RC3H1-201ENST00000258349 PRAC1Q96KF2 57 aa2.93□□□□□ -1.94
RC3H1-201ENST00000258349 NBEAQ8NFP9 2946 aa2.92□□□□□ -1.94
RC3H1-201ENST00000258349 NIPBLQ6KC79 2804 aaeCLIP2.92□□□□□ -1.942e-6■■■■□ 26.3
RC3H1-201ENST00000258349 HIVEP1P15822 2718 aa2.92□□□□□ -1.94
RC3H1-201ENST00000258349 H1FX-AS1Q4G0G2 97 aa2.91□□□□□ -1.94
RC3H1-201ENST00000258349 PRUNE2Q8WUY3 3088 aa2.91□□□□□ -1.94
RC3H1-201ENST00000258349 DNAH14Q0VDD8 3507 aa2.91□□□□□ -1.94
RC3H1-201ENST00000258349 Q8NDZ9 215 aa2.91□□□□□ -1.94
RC3H1-201ENST00000258349 ASH1LQ9NR48 2969 aaKnown RBP2.91□□□□□ -1.94
RC3H1-201ENST00000258349 LAMA1P25391 3075 aa2.9□□□□□ -1.94
RC3H1-201ENST00000258349 RPL37P61927 97 aaKnown RBP2.9□□□□□ -1.94
RC3H1-201ENST00000258349 M0R2T5 61 aa2.9□□□□□ -1.95
RC3H1-201ENST00000258349 R4GN34 69 aa2.9□□□□□ -1.95
RC3H1-201ENST00000258349 TENM1Q9UKZ4 2725 aa2.9□□□□□ -1.95
RC3H1-201ENST00000258349 KRTAP26-1Q6PEX3 210 aa2.89□□□□□ -1.95
RC3H1-201ENST00000258349 RANBP2P49792 3224 aaKnown RBP2.89□□□□□ -1.95
RC3H1-201ENST00000258349 OXTP01178 125 aa2.89□□□□□ -1.95
RC3H1-201ENST00000258349 ZZEF1O43149 2961 aa2.88□□□□□ -1.95
RC3H1-201ENST00000258349 SPTBN5Q9NRC6 3674 aaKnown RBP2.88□□□□□ -1.95
RC3H1-201ENST00000258349 CELSR2Q9HCU4 2923 aa2.88□□□□□ -1.95
RC3H1-201ENST00000258349 SEC61BP60468 96 aaKnown RBP2.87□□□□□ -1.95
RC3H1-201ENST00000258349 NF1P21359 2839 aa2.87□□□□□ -1.95
RC3H1-201ENST00000258349 HRNRQ86YZ3 2850 aaPredicted RBP2.86□□□□□ -1.95
RC3H1-201ENST00000258349 HTTP42858 3142 aa2.86□□□□□ -1.95
RC3H1-201ENST00000258349 COL12A1Q99715 3063 aa2.86□□□□□ -1.95
RC3H1-201ENST00000258349 ZANQ9Y493 2812 aa2.85□□□□□ -1.95
RC3H1-201ENST00000258349 CELSR3Q9NYQ7 3312 aa2.85□□□□□ -1.95
RC3H1-201ENST00000258349 TNRC18O15417 2968 aaPredicted RBP2.85□□□□□ -1.95
RC3H1-201ENST00000258349 SPATA8Q6RVD6 105 aa2.85□□□□□ -1.95
RC3H1-201ENST00000258349 KRTAP4-16G5E9R7 235 aaPredicted RBP2.85□□□□□ -1.95
RC3H1-201ENST00000258349 M0QZ58 72 aa2.85□□□□□ -1.95
RC3H1-201ENST00000258349 ADM2Q7Z4H4 148 aa2.84□□□□□ -1.95
RC3H1-201ENST00000258349 PANO1I0J062 215 aa2.84□□□□□ -1.96
RC3H1-201ENST00000258349 KRTAP29-1A8MX34 341 aaPredicted RBP2.83□□□□□ -1.96
RC3H1-201ENST00000258349 CRYBG3Q68DQ2 2970 aa2.83□□□□□ -1.96
RC3H1-201ENST00000258349 COL6A3P12111 3177 aa2.82□□□□□ -1.96
RC3H1-201ENST00000258349 KRTAP16-1A8MUX0 517 aa2.82□□□□□ -1.96
RC3H1-201ENST00000258349 PLAC4Q8WY50 150 aa2.82□□□□□ -1.96
RC3H1-201ENST00000258349 A6NN06 94 aa2.82□□□□□ -1.96
RC3H1-201ENST00000258349 RPS29P62273 56 aaKnown RBP2.82□□□□□ -1.96
RC3H1-201ENST00000258349 KRTAP1-5Q9BYS1 174 aa2.82□□□□□ -1.96
RC3H1-201ENST00000258349 Q5VSD8 79 aa2.82□□□□□ -1.96
RC3H1-201ENST00000258349 FBN2P35556 2912 aa2.82□□□□□ -1.96
RC3H1-201ENST00000258349 LCE6AA0A183 80 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms