RNA–Protein interactions for RNA: ENST00000257075.9

PUM1-201, Transcript of pumilio RNA binding family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PUM1, Length 5,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-201ENST00000257075 Q6ZR54 194 aa6.51□□□□□ -1.37
PUM1-201ENST00000257075 DMBT1Q9UGM3 2413 aaPredicted RBP6.51□□□□□ -1.37
PUM1-201ENST00000257075 ZCCHC13Q8WW36 166 aaKnown RBP6.49□□□□□ -1.37
PUM1-201ENST00000257075 MIR22HGQ0VDD5 57 aa6.49□□□□□ -1.37
PUM1-201ENST00000257075 C4orf26Q17RF5 130 aa6.48□□□□□ -1.37
PUM1-201ENST00000257075 HTTP42858 3142 aa6.47□□□□□ -1.37
PUM1-201ENST00000257075 A8MUN3 132 aa6.47□□□□□ -1.37
PUM1-201ENST00000257075 SPRR1AP35321 89 aa6.47□□□□□ -1.37
PUM1-201ENST00000257075 TRANK1O15050 2925 aa6.46□□□□□ -1.37
PUM1-201ENST00000257075 NSD1Q96L73 2696 aaPredicted RBP6.46□□□□□ -1.38
PUM1-201ENST00000257075 FP248Q71RG6 208 aaPredicted RBP6.46□□□□□ -1.38
PUM1-201ENST00000257075 MAP1AP78559 2803 aaPredicted RBP6.45□□□□□ -1.38
PUM1-201ENST00000257075 CYP4F30PQ9H0H9 118 aa6.45□□□□□ -1.38
PUM1-201ENST00000257075 A0A0C4DFX4 3053 aa6.45□□□□□ -1.38
PUM1-201ENST00000257075 ITPR2Q14571 2701 aa6.44□□□□□ -1.38
PUM1-201ENST00000257075 HRES1P13985 223 aa6.43□□□□□ -1.38
PUM1-201ENST00000257075 SPRR1BP22528 89 aa6.43□□□□□ -1.38
PUM1-201ENST00000257075 S4R3F8 94 aa6.42□□□□□ -1.38
PUM1-201ENST00000257075 RPS28P62857 69 aaKnown RBP6.42□□□□□ -1.38
PUM1-201ENST00000257075 PCNTO95613 3336 aa6.41□□□□□ -1.38
PUM1-201ENST00000257075 LAMA3Q16787 3333 aa6.41□□□□□ -1.38
PUM1-201ENST00000257075 KLKP1Q107X0 134 aa6.41□□□□□ -1.38
PUM1-201ENST00000257075 SPINK7P58062 85 aa6.41□□□□□ -1.38
PUM1-201ENST00000257075 WDFY4Q6ZS81 3184 aa6.4□□□□□ -1.38
PUM1-201ENST00000257075 KRTAP26-1Q6PEX3 210 aa6.4□□□□□ -1.38
PUM1-201ENST00000257075 SPANXA2-OT1Q8N9U9 137 aa6.4□□□□□ -1.38
PUM1-201ENST00000257075 CDC42SE1Q9NRR8 79 aa6.39□□□□□ -1.39
PUM1-201ENST00000257075 TENM4Q6N022 2769 aa6.37□□□□□ -1.39
PUM1-201ENST00000257075 PRUNE2Q8WUY3 3088 aa6.37□□□□□ -1.39
PUM1-201ENST00000257075 PRO0628Q9UI54 55 aa6.36□□□□□ -1.39
PUM1-201ENST00000257075 REV3LO60673 3130 aa6.35□□□□□ -1.39
PUM1-201ENST00000257075 R4GN34 69 aa6.35□□□□□ -1.39
PUM1-201ENST00000257075 FRYQ5TBA9 3013 aa6.35□□□□□ -1.39
PUM1-201ENST00000257075 MMP24-AS1A0A0U1RRL7 71 aa6.35□□□□□ -1.39
PUM1-201ENST00000257075 Q8NDZ9 215 aa6.35□□□□□ -1.39
PUM1-201ENST00000257075 PANO1I0J062 215 aa6.33□□□□□ -1.4
PUM1-201ENST00000257075 ITPR1Q14643 2758 aa6.33□□□□□ -1.4
PUM1-201ENST00000257075 A0A1B0GU33 70 aa6.32□□□□□ -1.4
PUM1-201ENST00000257075 MKI67P46013 3256 aaKnown RBP6.32□□□□□ -1.4
PUM1-201ENST00000257075 HIVEP1P15822 2718 aa6.31□□□□□ -1.4
PUM1-201ENST00000257075 LINC00483Q53H64 154 aa6.31□□□□□ -1.4
PUM1-201ENST00000257075 Q8N9P0 234 aaPredicted RBP6.31□□□□□ -1.4
PUM1-201ENST00000257075 TRIOO75962 3097 aa6.3□□□□□ -1.4
PUM1-201ENST00000257075 LINC00472Q9H8W2 130 aa6.3□□□□□ -1.4
PUM1-201ENST00000257075 CFAP54Q96N23 3096 aa6.3□□□□□ -1.4
PUM1-201ENST00000257075 FLNCQ14315 2725 aa6.3□□□□□ -1.4
PUM1-201ENST00000257075 Q5W150 140 aa6.29□□□□□ -1.4
PUM1-201ENST00000257075 H7BZZ5 65 aa6.29□□□□□ -1.4
PUM1-201ENST00000257075 NBEAL2Q6ZNJ1 2754 aa6.29□□□□□ -1.4
PUM1-201ENST00000257075 OCR1Q9BZK8 76 aa6.28□□□□□ -1.4
PUM1-201ENST00000257075 A0A087X002 238 aa6.26□□□□□ -1.41
PUM1-201ENST00000257075 Q6ZRN7 208 aaPredicted RBP6.26□□□□□ -1.41
PUM1-201ENST00000257075 PLAC4Q8WY50 150 aa6.24□□□□□ -1.41
PUM1-201ENST00000257075 DMAC1Q96GE9 116 aa6.22□□□□□ -1.41
PUM1-201ENST00000257075 BRCA2P51587 3418 aa6.22□□□□□ -1.41
PUM1-201ENST00000257075 TACC2O95359 2948 aa6.21□□□□□ -1.41
PUM1-201ENST00000257075 KMT2BQ9UMN6 2715 aaPredicted RBP6.21□□□□□ -1.42
PUM1-201ENST00000257075 LCA10Q71F78 164 aa6.2□□□□□ -1.42
PUM1-201ENST00000257075 RPS29P62273 56 aaKnown RBP6.19□□□□□ -1.42
PUM1-201ENST00000257075 M0QZ58 72 aa6.19□□□□□ -1.42
PUM1-201ENST00000257075 Q1T7F1 81 aa6.19□□□□□ -1.42
PUM1-201ENST00000257075 LUZP6Q538Z0 58 aa6.18□□□□□ -1.42
PUM1-201ENST00000257075 KRTAP4-16G5E9R7 235 aaPredicted RBP6.16□□□□□ -1.42
PUM1-201ENST00000257075 CRYBG3Q68DQ2 2970 aa6.13□□□□□ -1.43
PUM1-201ENST00000257075 COL12A1Q99715 3063 aa6.12□□□□□ -1.43
PUM1-201ENST00000257075 XIRP2A4UGR9 3374 aa6.12□□□□□ -1.43
PUM1-201ENST00000257075 LAMA2P24043 3122 aaKnown RBP6.11□□□□□ -1.43
PUM1-201ENST00000257075 ATMQ13315 3056 aa6.11□□□□□ -1.43
PUM1-201ENST00000257075 UTP20O75691 2785 aaKnown RBP6.11□□□□□ -1.43
PUM1-201ENST00000257075 FRYLO94915 3013 aa6.1□□□□□ -1.43
PUM1-201ENST00000257075 H1FX-AS1Q4G0G2 97 aa6.09□□□□□ -1.43
PUM1-201ENST00000257075 ADM2Q7Z4H4 148 aa6.09□□□□□ -1.44
PUM1-201ENST00000257075 ASB16-AS1Q495Z4 193 aa6.08□□□□□ -1.44
PUM1-201ENST00000257075 KRTAP11-1Q8IUC1 163 aa6.07□□□□□ -1.44
PUM1-201ENST00000257075 VPS13AQ96RL7 3174 aa6.07□□□□□ -1.44
PUM1-201ENST00000257075 Q75L30 129 aa6.06□□□□□ -1.44
PUM1-201ENST00000257075 C20orf166-AS1Q96NR2 134 aa6.06□□□□□ -1.44
PUM1-201ENST00000257075 APCP25054 2843 aa6.06□□□□□ -1.44
PUM1-201ENST00000257075 KRTAP13-2Q52LG2 175 aa6.05□□□□□ -1.44
PUM1-201ENST00000257075 LINC01558Q9Y6Z2 57 aa6.05□□□□□ -1.44
PUM1-201ENST00000257075 NIPBLQ6KC79 2804 aaeCLIP6.05□□□□□ -1.441e-6■■■□□ 16.1
PUM1-201ENST00000257075 RPL37P61927 97 aaKnown RBP6.04□□□□□ -1.44
PUM1-201ENST00000257075 UNC80Q8N2C7 3258 aa6.03□□□□□ -1.44
PUM1-201ENST00000257075 LAMA1P25391 3075 aa6.02□□□□□ -1.45
PUM1-201ENST00000257075 DMXL2Q8TDJ6 3036 aa6.01□□□□□ -1.45
PUM1-201ENST00000257075 Q5XG85 94 aa6□□□□□ -1.45
PUM1-201ENST00000257075 KTN1-AS1Q86SY8 53 aa5.99□□□□□ -1.45
PUM1-201ENST00000257075 LRBAP50851 2863 aa5.98□□□□□ -1.45
PUM1-201ENST00000257075 KRTAP13-1Q8IUC0 172 aa5.97□□□□□ -1.45
PUM1-201ENST00000257075 KRTAP7-1Q8IUC3 87 aa5.97□□□□□ -1.45
PUM1-201ENST00000257075 NOTCH2NLQ7Z3S9 236 aa5.97□□□□□ -1.45
PUM1-201ENST00000257075 A8MUU9 505 aa5.95□□□□□ -1.46
PUM1-201ENST00000257075 KRTAP29-1A8MX34 341 aaPredicted RBP5.94□□□□□ -1.46
PUM1-201ENST00000257075 EYSQ5T1H1 3165 aa5.93□□□□□ -1.46
PUM1-201ENST00000257075 NBEAQ8NFP9 2946 aa5.93□□□□□ -1.46
PUM1-201ENST00000257075 CELSR2Q9HCU4 2923 aa5.92□□□□□ -1.46
PUM1-201ENST00000257075 TENM3Q9P273 2699 aa5.92□□□□□ -1.46
PUM1-201ENST00000257075 ZZEF1O43149 2961 aa5.91□□□□□ -1.46
PUM1-201ENST00000257075 CDH23Q9H251 3354 aa5.91□□□□□ -1.46
PUM1-201ENST00000257075 BOD1L1Q8NFC6 3051 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms