RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 KRTAP21-3Q3LHN1 58 aa9.28□□□□□ -0.92
UBE4B-201ENST00000253251 C4orf26Q17RF5 130 aa9.25□□□□□ -0.93
UBE4B-201ENST00000253251 Q6ZR54 194 aa9.24□□□□□ -0.93
UBE4B-201ENST00000253251 COA5Q86WW8 74 aa9.24□□□□□ -0.93
UBE4B-201ENST00000253251 SPANXA2-OT1Q8N9U9 137 aa9.24□□□□□ -0.93
UBE4B-201ENST00000253251 UBR5O95071 2799 aaPredicted RBP9.23□□□□□ -0.93
UBE4B-201ENST00000253251 KMT2BQ9UMN6 2715 aaPredicted RBP9.23□□□□□ -0.93
UBE4B-201ENST00000253251 ITPR2Q14571 2701 aa9.23□□□□□ -0.93
UBE4B-201ENST00000253251 FRYQ5TBA9 3013 aa9.22□□□□□ -0.93
UBE4B-201ENST00000253251 LAMA1P25391 3075 aa9.22□□□□□ -0.93
UBE4B-201ENST00000253251 MAP1AP78559 2803 aaPredicted RBP9.22□□□□□ -0.93
UBE4B-201ENST00000253251 C9orf92A6NGG3 77 aa9.21□□□□□ -0.93
UBE4B-201ENST00000253251 H7BZZ5 65 aa9.21□□□□□ -0.93
UBE4B-201ENST00000253251 OCR1Q9BZK8 76 aa9.19□□□□□ -0.94
UBE4B-201ENST00000253251 ITPR1Q14643 2758 aa9.19□□□□□ -0.94
UBE4B-201ENST00000253251 CYP4F30PQ9H0H9 118 aa9.18□□□□□ -0.94
UBE4B-201ENST00000253251 PRR26Q8N8Z3 221 aa9.18□□□□□ -0.94
UBE4B-201ENST00000253251 ATMQ13315 3056 aa9.17□□□□□ -0.94
UBE4B-201ENST00000253251 NSD1Q96L73 2696 aaPredicted RBP9.15□□□□□ -0.94
UBE4B-201ENST00000253251 FRYLO94915 3013 aa9.15□□□□□ -0.94
UBE4B-201ENST00000253251 DMXL2Q8TDJ6 3036 aa9.14□□□□□ -0.95
UBE4B-201ENST00000253251 KRTAP4-16G5E9R7 235 aaPredicted RBP9.13□□□□□ -0.95
UBE4B-201ENST00000253251 LINC00483Q53H64 154 aa9.12□□□□□ -0.95
UBE4B-201ENST00000253251 UTP20O75691 2785 aaKnown RBP9.12□□□□□ -0.95
UBE4B-201ENST00000253251 RBM12B-AS1Q9P1G2 102 aa9.12□□□□□ -0.95
UBE4B-201ENST00000253251 HIVEP1P15822 2718 aa9.12□□□□□ -0.95
UBE4B-201ENST00000253251 KRTAP10-1P60331 282 aa9.11□□□□□ -0.95
UBE4B-201ENST00000253251 LINC00472Q9H8W2 130 aa9.11□□□□□ -0.95
UBE4B-201ENST00000253251 APCP25054 2843 aa9.09□□□□□ -0.95
UBE4B-201ENST00000253251 IGLV7-46A0A075B6I9 117 aa9.09□□□□□ -0.95
UBE4B-201ENST00000253251 MMP24-AS1A0A0U1RRL7 71 aa9.09□□□□□ -0.95
UBE4B-201ENST00000253251 COL12A1Q99715 3063 aa9.09□□□□□ -0.95
UBE4B-201ENST00000253251 KRTAP10-2P60368 255 aa9.09□□□□□ -0.95
UBE4B-201ENST00000253251 COX6B2Q6YFQ2 88 aa9.09□□□□□ -0.95
UBE4B-201ENST00000253251 COL6A3P12111 3177 aa9.06□□□□□ -0.96
UBE4B-201ENST00000253251 UQCR11O14957 56 aa9.06□□□□□ -0.96
UBE4B-201ENST00000253251 Q6ZRN7 208 aaPredicted RBP9.06□□□□□ -0.96
UBE4B-201ENST00000253251 NBEAL2Q6ZNJ1 2754 aa9.05□□□□□ -0.96
UBE4B-201ENST00000253251 A8MUN3 132 aa9.05□□□□□ -0.96
UBE4B-201ENST00000253251 NBEAL1Q6ZS30 2694 aa9.05□□□□□ -0.96
UBE4B-201ENST00000253251 ADGRG4Q8IZF6 3080 aa9.04□□□□□ -0.96
UBE4B-201ENST00000253251 VCANP13611 3396 aa9.04□□□□□ -0.96
UBE4B-201ENST00000253251 EYSQ5T1H1 3165 aa9.02□□□□□ -0.96
UBE4B-201ENST00000253251 PANO1I0J062 215 aa8.99□□□□□ -0.97
UBE4B-201ENST00000253251 ZCCHC13Q8WW36 166 aaKnown RBP8.99□□□□□ -0.97
UBE4B-201ENST00000253251 BOD1L1Q8NFC6 3051 aa8.98□□□□□ -0.97
UBE4B-201ENST00000253251 Q5VSD8 79 aa8.97□□□□□ -0.97
UBE4B-201ENST00000253251 Q6ZSA8 131 aa8.97□□□□□ -0.97
UBE4B-201ENST00000253251 LRBAP50851 2863 aa8.94□□□□□ -0.98
UBE4B-201ENST00000253251 CELSR3Q9NYQ7 3312 aa8.93□□□□□ -0.98
UBE4B-201ENST00000253251 REV3LO60673 3130 aa8.93□□□□□ -0.98
UBE4B-201ENST00000253251 TACC2O95359 2948 aa8.92□□□□□ -0.98
UBE4B-201ENST00000253251 Q8N1X5 172 aa8.92□□□□□ -0.98
UBE4B-201ENST00000253251 DMXL1Q9Y485 3027 aa8.92□□□□□ -0.98
UBE4B-201ENST00000253251 HRES1P13985 223 aa8.92□□□□□ -0.98
UBE4B-201ENST00000253251 MIR22HGQ0VDD5 57 aa8.91□□□□□ -0.98
UBE4B-201ENST00000253251 NIPBLQ6KC79 2804 aaeCLIP8.9□□□□□ -0.981e-5■■■■□ 22.3
UBE4B-201ENST00000253251 KALRNO60229 2985 aa8.9□□□□□ -0.98
UBE4B-201ENST00000253251 FP248Q71RG6 208 aaPredicted RBP8.9□□□□□ -0.98
UBE4B-201ENST00000253251 NBEAQ8NFP9 2946 aa8.9□□□□□ -0.99
UBE4B-201ENST00000253251 KTN1-AS1Q86SY8 53 aa8.89□□□□□ -0.99
UBE4B-201ENST00000253251 SPTBN5Q9NRC6 3674 aaKnown RBP8.89□□□□□ -0.99
UBE4B-201ENST00000253251 ZZEF1O43149 2961 aa8.88□□□□□ -0.99
UBE4B-201ENST00000253251 LCA10Q71F78 164 aa8.87□□□□□ -0.99
UBE4B-201ENST00000253251 ASB16-AS1Q495Z4 193 aa8.87□□□□□ -0.99
UBE4B-201ENST00000253251 DNAH14Q0VDD8 3507 aa8.86□□□□□ -0.99
UBE4B-201ENST00000253251 RPS29P62273 56 aaKnown RBP8.86□□□□□ -0.99
UBE4B-201ENST00000253251 Q5W150 140 aa8.85□□□□□ -0.99
UBE4B-201ENST00000253251 HRNRQ86YZ3 2850 aaPredicted RBP8.85□□□□□ -0.99
UBE4B-201ENST00000253251 KRTAP7-1Q8IUC3 87 aa8.84□□□□□ -0.99
UBE4B-201ENST00000253251 Q1T7F1 81 aa8.84□□□□□ -0.99
UBE4B-201ENST00000253251 FREM2Q5SZK8 3169 aa8.83□□□□□ -1
UBE4B-201ENST00000253251 KRTAP13-1Q8IUC0 172 aa8.81□□□□□ -1
UBE4B-201ENST00000253251 SEC61BP60468 96 aaKnown RBP8.81□□□□□ -1
UBE4B-201ENST00000253251 Q8N9P0 234 aaPredicted RBP8.8□□□□□ -1
UBE4B-201ENST00000253251 ZANQ9Y493 2812 aa8.79□□□□□ -1
UBE4B-201ENST00000253251 KRTAP11-1Q8IUC1 163 aa8.78□□□□□ -1
UBE4B-201ENST00000253251 KRTAP29-1A8MX34 341 aaPredicted RBP8.78□□□□□ -1
UBE4B-201ENST00000253251 A0A087X002 238 aa8.78□□□□□ -1
UBE4B-201ENST00000253251 SPINK7P58062 85 aa8.77□□□□□ -1.01
UBE4B-201ENST00000253251 Q5XG85 94 aa8.77□□□□□ -1.01
UBE4B-201ENST00000253251 STAB2Q8WWQ8 2551 aa8.77□□□□□ -1.01
UBE4B-201ENST00000253251 SPINT4Q6UDR6 99 aa8.75□□□□□ -1.01
UBE4B-201ENST00000253251 OXTP01178 125 aa8.75□□□□□ -1.01
UBE4B-201ENST00000253251 CDC42SE1Q9NRR8 79 aa8.74□□□□□ -1.01
UBE4B-201ENST00000253251 LINC01558Q9Y6Z2 57 aa8.73□□□□□ -1.01
UBE4B-201ENST00000253251 TENM4Q6N022 2769 aa8.72□□□□□ -1.01
UBE4B-201ENST00000253251 USP34Q70CQ2 3546 aa8.71□□□□□ -1.01
UBE4B-201ENST00000253251 CSAG1Q6PB30 78 aa8.71□□□□□ -1.02
UBE4B-201ENST00000253251 Q75L30 129 aa8.68□□□□□ -1.02
UBE4B-201ENST00000253251 S4R3F8 94 aa8.67□□□□□ -1.02
UBE4B-201ENST00000253251 A0A1B0GU33 70 aa8.66□□□□□ -1.02
UBE4B-201ENST00000253251 DMAC1Q96GE9 116 aa8.65□□□□□ -1.02
UBE4B-201ENST00000253251 CRIPTQ9P021 101 aa8.65□□□□□ -1.03
UBE4B-201ENST00000253251 CYSTM1Q9H1C7 97 aa8.64□□□□□ -1.03
UBE4B-201ENST00000253251 KRTAP13-2Q52LG2 175 aa8.62□□□□□ -1.03
UBE4B-201ENST00000253251 CELSR2Q9HCU4 2923 aa8.59□□□□□ -1.03
UBE4B-201ENST00000253251 LOC400499M0QZD8 3231 aa8.57□□□□□ -1.04
UBE4B-201ENST00000253251 A0A0D9SG42 100 aa8.56□□□□□ -1.04
UBE4B-201ENST00000253251 LINC01554Q52M75 96 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 354.1 ms