RNA–Protein interactions for RNA: ENST00000253048.9

ZC3H4-201, Transcript of zinc finger CCCH-type containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ZC3H4, Length 6,119 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4-201ENST00000253048 PLAC4Q8WY50 150 aa8.99□□□□□ -0.97
ZC3H4-201ENST00000253048 WIPF1O43516 503 aa8.99□□□□□ -0.97
ZC3H4-201ENST00000253048 S4R3F8 94 aa8.99□□□□□ -0.97
ZC3H4-201ENST00000253048 A0A1B0GU33 70 aa8.97□□□□□ -0.97
ZC3H4-201ENST00000253048 SPTBN5Q9NRC6 3674 aaKnown RBP8.92□□□□□ -0.98
ZC3H4-201ENST00000253048 DSPP15924 2871 aaKnown RBP8.92□□□□□ -0.98
ZC3H4-201ENST00000253048 HECTD1Q9ULT8 2610 aa8.91□□□□□ -0.98
ZC3H4-201ENST00000253048 R4GN34 69 aa8.91□□□□□ -0.98
ZC3H4-201ENST00000253048 A0A1W2PNM2 257 aa8.9□□□□□ -0.99
ZC3H4-201ENST00000253048 ZCCHC13Q8WW36 166 aaKnown RBP8.89□□□□□ -0.99
ZC3H4-201ENST00000253048 H1FX-AS1Q4G0G2 97 aa8.89□□□□□ -0.99
ZC3H4-201ENST00000253048 FRYQ5TBA9 3013 aa8.89□□□□□ -0.99
ZC3H4-201ENST00000253048 SPINK7P58062 85 aa8.88□□□□□ -0.99
ZC3H4-201ENST00000253048 SPEGQ15772 3267 aa8.88□□□□□ -0.99
ZC3H4-201ENST00000253048 ZNF292O60281 2723 aa8.88□□□□□ -0.99
ZC3H4-201ENST00000253048 KRTAP10-1P60331 282 aa8.88□□□□□ -0.99
ZC3H4-201ENST00000253048 MAP1AP78559 2803 aaPredicted RBP8.87□□□□□ -0.99
ZC3H4-201ENST00000253048 FLNBO75369 2602 aaKnown RBP8.87□□□□□ -0.99
ZC3H4-201ENST00000253048 FREM2Q5SZK8 3169 aa8.87□□□□□ -0.99
ZC3H4-201ENST00000253048 SPANXA2-OT1Q8N9U9 137 aa8.87□□□□□ -0.99
ZC3H4-201ENST00000253048 DMAC1Q96GE9 116 aa8.87□□□□□ -0.99
ZC3H4-201ENST00000253048 H7BZZ5 65 aa8.86□□□□□ -0.99
ZC3H4-201ENST00000253048 NBEAQ8NFP9 2946 aa8.86□□□□□ -0.99
ZC3H4-201ENST00000253048 USP24Q9UPU5 2620 aa8.86□□□□□ -0.99
ZC3H4-201ENST00000253048 FLNAP21333 2647 aaKnown RBP8.85□□□□□ -0.99
ZC3H4-201ENST00000253048 EYSQ5T1H1 3165 aa8.84□□□□□ -0.99
ZC3H4-201ENST00000253048 MYO15AQ9UKN7 3530 aa8.83□□□□□ -1
ZC3H4-201ENST00000253048 KRTAP10-2P60368 255 aa8.82□□□□□ -1
ZC3H4-201ENST00000253048 AKAP13Q12802 2813 aa8.82□□□□□ -1
ZC3H4-201ENST00000253048 KLKP1Q107X0 134 aa8.82□□□□□ -1
ZC3H4-201ENST00000253048 REV3LO60673 3130 aa8.8□□□□□ -1
ZC3H4-201ENST00000253048 ITPR3Q14573 2671 aa8.79□□□□□ -1
ZC3H4-201ENST00000253048 FRYLO94915 3013 aa8.79□□□□□ -1
ZC3H4-201ENST00000253048 FP248Q71RG6 208 aaPredicted RBP8.78□□□□□ -1
ZC3H4-201ENST00000253048 USP34Q70CQ2 3546 aa8.76□□□□□ -1.01
ZC3H4-201ENST00000253048 MGAM2Q2M2H8 2515 aa8.73□□□□□ -1.01
ZC3H4-201ENST00000253048 ATRQ13535 2644 aa8.72□□□□□ -1.01
ZC3H4-201ENST00000253048 CFAP46Q8IYW2 2715 aa8.72□□□□□ -1.01
ZC3H4-201ENST00000253048 BOD1L1Q8NFC6 3051 aa8.71□□□□□ -1.01
ZC3H4-201ENST00000253048 KRTAP1-5Q9BYS1 174 aa8.69□□□□□ -1.02
ZC3H4-201ENST00000253048 M0QZ58 72 aa8.68□□□□□ -1.02
ZC3H4-201ENST00000253048 KRTAP21-3Q3LHN1 58 aa8.67□□□□□ -1.02
ZC3H4-201ENST00000253048 CHD6Q8TD26 2715 aa8.67□□□□□ -1.02
ZC3H4-201ENST00000253048 COL6A3P12111 3177 aa8.66□□□□□ -1.02
ZC3H4-201ENST00000253048 ADGRG4Q8IZF6 3080 aa8.65□□□□□ -1.03
ZC3H4-201ENST00000253048 KALRNO60229 2985 aa8.65□□□□□ -1.03
ZC3H4-201ENST00000253048 HELZ2Q9BYK8 2649 aaKnown RBP8.6□□□□□ -1.03
ZC3H4-201ENST00000253048 CR1P17927 2039 aa8.58□□□□□ -1.04
ZC3H4-201ENST00000253048 Q6ZR54 194 aa8.58□□□□□ -1.04
ZC3H4-201ENST00000253048 Q5W150 140 aa8.57□□□□□ -1.04
ZC3H4-201ENST00000253048 MMP24-AS1A0A0U1RRL7 71 aa8.57□□□□□ -1.04
ZC3H4-201ENST00000253048 Q8N9P0 234 aaPredicted RBP8.57□□□□□ -1.04
ZC3H4-201ENST00000253048 MAST4O15021 2626 aa8.57□□□□□ -1.04
ZC3H4-201ENST00000253048 RPL37P61927 97 aaKnown RBP8.57□□□□□ -1.04
ZC3H4-201ENST00000253048 H3BS24 57 aa8.56□□□□□ -1.04
ZC3H4-201ENST00000253048 ATMQ13315 3056 aa8.56□□□□□ -1.04
ZC3H4-201ENST00000253048 ROMO1P60602 79 aa8.56□□□□□ -1.04
ZC3H4-201ENST00000253048 SPRR1AP35321 89 aa8.55□□□□□ -1.04
ZC3H4-201ENST00000253048 Q75L30 129 aa8.55□□□□□ -1.04
ZC3H4-201ENST00000253048 SPRR1BP22528 89 aa8.54□□□□□ -1.04
ZC3H4-201ENST00000253048 GCN1Q92616 2671 aaKnown RBP8.54□□□□□ -1.04
ZC3H4-201ENST00000253048 LRBAP50851 2863 aa8.5□□□□□ -1.05
ZC3H4-201ENST00000253048 PRAC1Q96KF2 57 aa8.5□□□□□ -1.05
ZC3H4-201ENST00000253048 DMXL2Q8TDJ6 3036 aa8.49□□□□□ -1.05
ZC3H4-201ENST00000253048 LINC01558Q9Y6Z2 57 aa8.49□□□□□ -1.05
ZC3H4-201ENST00000253048 CFAP47Q6ZTR5 3102 aa8.48□□□□□ -1.05
ZC3H4-201ENST00000253048 NBEAL2Q6ZNJ1 2754 aa8.48□□□□□ -1.05
ZC3H4-201ENST00000253048 ADM2Q7Z4H4 148 aa8.48□□□□□ -1.05
ZC3H4-201ENST00000253048 TACC2O95359 2948 aa8.45□□□□□ -1.06
ZC3H4-201ENST00000253048 C20orf166-AS1Q96NR2 134 aa8.45□□□□□ -1.06
ZC3H4-201ENST00000253048 TEX15Q9BXT5 2789 aa8.45□□□□□ -1.06
ZC3H4-201ENST00000253048 IGSF10Q6WRI0 2623 aa8.45□□□□□ -1.06
ZC3H4-201ENST00000253048 COL12A1Q99715 3063 aa8.44□□□□□ -1.06
ZC3H4-201ENST00000253048 Q8NDZ9 215 aa8.44□□□□□ -1.06
ZC3H4-201ENST00000253048 OCR1Q9BZK8 76 aa8.43□□□□□ -1.06
ZC3H4-201ENST00000253048 LINC00472Q9H8W2 130 aa8.42□□□□□ -1.06
ZC3H4-201ENST00000253048 UNC79Q9P2D8 2635 aa8.42□□□□□ -1.06
ZC3H4-201ENST00000253048 TEP1Q99973 2627 aaKnown RBP8.41□□□□□ -1.06
ZC3H4-201ENST00000253048 FLG2Q5D862 2391 aaPredicted RBP8.41□□□□□ -1.06
ZC3H4-201ENST00000253048 WDFY3Q8IZQ1 3526 aa8.41□□□□□ -1.06
ZC3H4-201ENST00000253048 LOC400499M0QZD8 3231 aa8.4□□□□□ -1.06
ZC3H4-201ENST00000253048 FLNCQ14315 2725 aa8.4□□□□□ -1.06
ZC3H4-201ENST00000253048 KRTAP26-1Q6PEX3 210 aa8.39□□□□□ -1.07
ZC3H4-201ENST00000253048 PANO1I0J062 215 aa8.39□□□□□ -1.07
ZC3H4-201ENST00000253048 ZZEF1O43149 2961 aa8.38□□□□□ -1.07
ZC3H4-201ENST00000253048 A0A087X002 238 aa8.37□□□□□ -1.07
ZC3H4-201ENST00000253048 SETXQ7Z333 2677 aaKnown RBP8.36□□□□□ -1.07
ZC3H4-201ENST00000253048 CYSTM1Q9H1C7 97 aa8.35□□□□□ -1.07
ZC3H4-201ENST00000253048 ITPR1Q14643 2758 aa8.35□□□□□ -1.07
ZC3H4-201ENST00000253048 UBR5O95071 2799 aaPredicted RBP8.34□□□□□ -1.07
ZC3H4-201ENST00000253048 NOTCH1P46531 2555 aa8.34□□□□□ -1.08
ZC3H4-201ENST00000253048 RPS29P62273 56 aaKnown RBP8.32□□□□□ -1.08
ZC3H4-201ENST00000253048 DMDP11532 3685 aa8.32□□□□□ -1.08
ZC3H4-201ENST00000253048 KRTAP16-1A8MUX0 517 aa8.31□□□□□ -1.08
ZC3H4-201ENST00000253048 TNRC18O15417 2968 aaPredicted RBP8.31□□□□□ -1.08
ZC3H4-201ENST00000253048 DMXL1Q9Y485 3027 aa8.3□□□□□ -1.08
ZC3H4-201ENST00000253048 ASH1LQ9NR48 2969 aaKnown RBP8.27□□□□□ -1.09
ZC3H4-201ENST00000253048 COL6A5A8TX70 2615 aa8.26□□□□□ -1.09
ZC3H4-201ENST00000253048 STAB1Q9NY15 2570 aa8.24□□□□□ -1.09
ZC3H4-201ENST00000253048 BAHCC1Q9P281 2608 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms