RNA–Protein interactions for RNA: ENST00000248437.8

TUBA4A-201, Transcript of tubulin alpha 4a, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA4A, Length 2,162 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-201ENST00000248437 COX7CP15954 63 aa11.53□□□□□ -0.56
TUBA4A-201ENST00000248437 DNAH6Q9C0G6 4158 aa11.53□□□□□ -0.56
TUBA4A-201ENST00000248437 BCE1O60756 84 aa11.52□□□□□ -0.56
TUBA4A-201ENST00000248437 UBE2AP49459 152 aa11.52□□□□□ -0.57
TUBA4A-201ENST00000248437 IGLV8-61A0A075B6I0 122 aa11.51□□□□□ -0.57
TUBA4A-201ENST00000248437 SPRR1BP22528 89 aa11.51□□□□□ -0.57
TUBA4A-201ENST00000248437 DNAH17Q9UFH2 4485 aa11.51□□□□□ -0.57
TUBA4A-201ENST00000248437 KRTAP13-1Q8IUC0 172 aa11.5□□□□□ -0.57
TUBA4A-201ENST00000248437 SERP2Q8N6R1 65 aa11.5□□□□□ -0.57
TUBA4A-201ENST00000248437 HECTD4Q9Y4D8 3996 aa11.49□□□□□ -0.57
TUBA4A-201ENST00000248437 SACSQ9NZJ4 4579 aa11.49□□□□□ -0.57
TUBA4A-201ENST00000248437 SCXQ7RTU7 201 aa11.48□□□□□ -0.57
TUBA4A-201ENST00000248437 CRYGAP11844 174 aa11.47□□□□□ -0.57
TUBA4A-201ENST00000248437 IGFL1Q6UW32 110 aa11.46□□□□□ -0.57
TUBA4A-201ENST00000248437 IGLV5-52A0A0A0MRZ9 124 aa11.45□□□□□ -0.58
TUBA4A-201ENST00000248437 BPY2O14599 106 aa11.45□□□□□ -0.58
TUBA4A-201ENST00000248437 C9orf153Q5TBE3 101 aa11.45□□□□□ -0.58
TUBA4A-201ENST00000248437 PLAC8Q9NZF1 115 aa11.45□□□□□ -0.58
TUBA4A-201ENST00000248437 FRAS1Q86XX4 4008 aa11.45□□□□□ -0.58
TUBA4A-201ENST00000248437 IGKV4-1P06312 121 aa11.4□□□□□ -0.58
TUBA4A-201ENST00000248437 SMIM20Q8N5G0 67 aa11.4□□□□□ -0.59
TUBA4A-201ENST00000248437 Q8N9L7 120 aa11.37□□□□□ -0.59
TUBA4A-201ENST00000248437 KMT2CQ8NEZ4 4911 aaKnown RBP11.36□□□□□ -0.59
TUBA4A-201ENST00000248437 A0A0G2JQZ4 141 aa11.36□□□□□ -0.59
TUBA4A-201ENST00000248437 FAT2Q9NYQ8 4349 aa11.36□□□□□ -0.59
TUBA4A-201ENST00000248437 TRAV7A0A075B6U4 112 aa11.35□□□□□ -0.59
TUBA4A-201ENST00000248437 PSORS1C2Q9UIG4 136 aa11.35□□□□□ -0.59
TUBA4A-201ENST00000248437 DNAH11Q96DT5 4516 aa11.34□□□□□ -0.59
TUBA4A-201ENST00000248437 SS18L2Q9UHA2 77 aa11.33□□□□□ -0.6
TUBA4A-201ENST00000248437 LINC00483Q53H64 154 aa11.31□□□□□ -0.6
TUBA4A-201ENST00000248437 ZNF706Q9Y5V0 76 aaPredicted RBP11.31□□□□□ -0.6
TUBA4A-201ENST00000248437 DNAH8Q96JB1 4490 aa11.31□□□□□ -0.6
TUBA4A-201ENST00000248437 SRRM2Q9UQ35 2752 aaKnown RBP11.31□□□□□ -0.6
TUBA4A-201ENST00000248437 A0A087WSZ3 146 aa11.31□□□□□ -0.6
TUBA4A-201ENST00000248437 LCE6AA0A183 80 aa11.31□□□□□ -0.6
TUBA4A-201ENST00000248437 DNAH5Q8TE73 4624 aa11.3□□□□□ -0.6
TUBA4A-201ENST00000248437 DSCR10P59022 87 aa11.3□□□□□ -0.6
TUBA4A-201ENST00000248437 ZNF861PO60384 105 aa11.29□□□□□ -0.6
TUBA4A-201ENST00000248437 RYR2Q92736 4967 aa11.28□□□□□ -0.6
TUBA4A-201ENST00000248437 KRTAP10-2P60368 255 aa11.26□□□□□ -0.61
TUBA4A-201ENST00000248437 RPL37AP61513 92 aaKnown RBP11.26□□□□□ -0.61
TUBA4A-201ENST00000248437 CYSTM1Q9H1C7 97 aa11.25□□□□□ -0.61
TUBA4A-201ENST00000248437 PKD1P98161 4303 aa11.24□□□□□ -0.61
TUBA4A-201ENST00000248437 K7EQZ3 153 aa11.23□□□□□ -0.61
TUBA4A-201ENST00000248437 C20orf197Q8N268 126 aa11.22□□□□□ -0.61
TUBA4A-201ENST00000248437 IGLV9-49A0A0B4J1Y8 123 aa11.21□□□□□ -0.62
TUBA4A-201ENST00000248437 IGLV7-43P04211 117 aa11.2□□□□□ -0.62
TUBA4A-201ENST00000248437 OCR1Q9BZK8 76 aa11.2□□□□□ -0.62
TUBA4A-201ENST00000248437 FAM30AQ9NZY2 134 aa11.2□□□□□ -0.62
TUBA4A-201ENST00000248437 CIRBP-AS1Q8TBR5 109 aa11.19□□□□□ -0.62
TUBA4A-201ENST00000248437 Q6ZSA8 131 aa11.18□□□□□ -0.62
TUBA4A-201ENST00000248437 TMEM258P61165 79 aa11.18□□□□□ -0.62
TUBA4A-201ENST00000248437 KLKP1Q107X0 134 aa11.18□□□□□ -0.62
TUBA4A-201ENST00000248437 LINC00472Q9H8W2 130 aa11.17□□□□□ -0.62
TUBA4A-201ENST00000248437 DEFB116Q30KQ4 102 aa11.17□□□□□ -0.62
TUBA4A-201ENST00000248437 PKHD1P08F94 4074 aa11.15□□□□□ -0.62
TUBA4A-201ENST00000248437 HCG22E2RYF7 251 aa11.15□□□□□ -0.62
TUBA4A-201ENST00000248437 KRTAP10-1P60331 282 aa11.13□□□□□ -0.63
TUBA4A-201ENST00000248437 MOBPQ13875 183 aa11.12□□□□□ -0.63
TUBA4A-201ENST00000248437 RYR3Q15413 4870 aa11.12□□□□□ -0.63
TUBA4A-201ENST00000248437 J3KT08 172 aa11.11□□□□□ -0.63
TUBA4A-201ENST00000248437 A8MWP4 228 aa11.1□□□□□ -0.63
TUBA4A-201ENST00000248437 PRR15Q8IV56 129 aa11.09□□□□□ -0.63
TUBA4A-201ENST00000248437 TMEM254Q8TBM7 123 aa11.09□□□□□ -0.63
TUBA4A-201ENST00000248437 ANAPC11Q9NYG5 84 aa11.09□□□□□ -0.63
TUBA4A-201ENST00000248437 H7BZZ5 65 aa11.08□□□□□ -0.64
TUBA4A-201ENST00000248437 SNURFQ9Y675 71 aa11.08□□□□□ -0.64
TUBA4A-201ENST00000248437 NDUFC1O43677 76 aa11.06□□□□□ -0.64
TUBA4A-201ENST00000248437 Q96NJ1 140 aa11.05□□□□□ -0.64
TUBA4A-201ENST00000248437 LRP1BQ9NZR2 4599 aa11.05□□□□□ -0.64
TUBA4A-201ENST00000248437 LINC00336Q6ZUF6 198 aa11.04□□□□□ -0.64
TUBA4A-201ENST00000248437 KRTAP29-1A8MX34 341 aaPredicted RBP11.03□□□□□ -0.64
TUBA4A-201ENST00000248437 HRCT1Q6UXD1 115 aa11.03□□□□□ -0.64
TUBA4A-201ENST00000248437 A0A0U1RQV1 116 aa11.03□□□□□ -0.64
TUBA4A-201ENST00000248437 WFDC13Q8IUB5 93 aa11.02□□□□□ -0.65
TUBA4A-201ENST00000248437 A0A1B0GVY2 172 aa11.01□□□□□ -0.65
TUBA4A-201ENST00000248437 DYNC1H1Q14204 4646 aaKnown RBP11.01□□□□□ -0.65
TUBA4A-201ENST00000248437 NDUFB1O75438 58 aa11□□□□□ -0.65
TUBA4A-201ENST00000248437 RPS28P62857 69 aaKnown RBP10.99□□□□□ -0.65
TUBA4A-201ENST00000248437 CASC2Q6XLA1 102 aa10.99□□□□□ -0.65
TUBA4A-201ENST00000248437 SSBP3-AS1Q7Z2R9 100 aa10.99□□□□□ -0.65
TUBA4A-201ENST00000248437 FAM236DA0A1B0GTK5 79 aa10.98□□□□□ -0.65
TUBA4A-201ENST00000248437 FAM236CP0DP71 79 aa10.98□□□□□ -0.65
TUBA4A-201ENST00000248437 CD164Q04900 197 aa10.98□□□□□ -0.65
TUBA4A-201ENST00000248437 C5orf47Q569G3 176 aa10.97□□□□□ -0.65
TUBA4A-201ENST00000248437 MMP24-AS1A0A0U1RRL7 71 aa10.94□□□□□ -0.66
TUBA4A-201ENST00000248437 FAM229BQ4G0N7 80 aa10.94□□□□□ -0.66
TUBA4A-201ENST00000248437 ATP5EP56381 51 aaPredicted RBP10.9□□□□□ -0.66
TUBA4A-201ENST00000248437 ZCCHC13Q8WW36 166 aaKnown RBP10.9□□□□□ -0.66
TUBA4A-201ENST00000248437 A0A1B0GVX0 72 aa10.89□□□□□ -0.67
TUBA4A-201ENST00000248437 ASB16-AS1Q495Z4 193 aa10.89□□□□□ -0.67
TUBA4A-201ENST00000248437 A0A087X002 238 aa10.89□□□□□ -0.67
TUBA4A-201ENST00000248437 hDV103S1A0JD37 113 aa10.89□□□□□ -0.67
TUBA4A-201ENST00000248437 CDK2AP2O75956 126 aa10.89□□□□□ -0.67
TUBA4A-201ENST00000248437 C8orf17Q9NRJ1 99 aa10.87□□□□□ -0.67
TUBA4A-201ENST00000248437 APOBP04114 4563 aaKnown RBP10.87□□□□□ -0.67
TUBA4A-201ENST00000248437 KRTAP13-2Q52LG2 175 aa10.86□□□□□ -0.67
TUBA4A-201ENST00000248437 MP68P56378 58 aa10.86□□□□□ -0.67
TUBA4A-201ENST00000248437 KRTAP1-4P0C5Y4 121 aa10.85□□□□□ -0.67
TUBA4A-201ENST00000248437 VPS13BQ7Z7G8 4022 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms