RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 C9orf163Q8N9P6 203 aa13.77□□□□□ -0.21
RNF39-201ENST00000244360 DNAH7Q8WXX0 4024 aa13.76□□□□□ -0.21
RNF39-201ENST00000244360 SMIM26A0A096LP01 95 aa13.75□□□□□ -0.21
RNF39-201ENST00000244360 PKIGQ9Y2B9 76 aa13.75□□□□□ -0.21
RNF39-201ENST00000244360 CHTF8P0CG12 524 aa13.74□□□□□ -0.21
RNF39-201ENST00000244360 TENM2Q9NT68 2774 aa13.73□□□□□ -0.21
RNF39-201ENST00000244360 PRLHP81277 87 aa13.72□□□□□ -0.21
RNF39-201ENST00000244360 HRCT1Q6UXD1 115 aa13.72□□□□□ -0.21
RNF39-201ENST00000244360 VPS13DQ5THJ4 4388 aa13.72□□□□□ -0.21
RNF39-201ENST00000244360 LINC00476Q8WZB0 136 aa13.72□□□□□ -0.21
RNF39-201ENST00000244360 DSCR10P59022 87 aa13.71□□□□□ -0.21
RNF39-201ENST00000244360 LCE6AA0A183 80 aa13.71□□□□□ -0.22
RNF39-201ENST00000244360 PHF5AQ7RTV0 110 aaKnown RBP13.7□□□□□ -0.22
RNF39-201ENST00000244360 KRTAP11-1Q8IUC1 163 aa13.7□□□□□ -0.22
RNF39-201ENST00000244360 IGLV8-61A0A075B6I0 122 aa13.68□□□□□ -0.22
RNF39-201ENST00000244360 H0Y9J4 135 aa13.68□□□□□ -0.22
RNF39-201ENST00000244360 FAM30AQ9NZY2 134 aa13.68□□□□□ -0.22
RNF39-201ENST00000244360 HIGD2AQ9BW72 106 aa13.67□□□□□ -0.22
RNF39-201ENST00000244360 LINC00474Q9P2X8 69 aa13.67□□□□□ -0.22
RNF39-201ENST00000244360 PRKDCP78527 4128 aaKnown RBP13.66□□□□□ -0.22
RNF39-201ENST00000244360 IGFL1Q6UW32 110 aa13.66□□□□□ -0.22
RNF39-201ENST00000244360 STARD9Q9P2P6 4700 aa13.65□□□□□ -0.22
RNF39-201ENST00000244360 K7EQZ3 153 aa13.65□□□□□ -0.22
RNF39-201ENST00000244360 HCG22E2RYF7 251 aa13.62□□□□□ -0.23
RNF39-201ENST00000244360 FP248Q71RG6 208 aaPredicted RBP13.62□□□□□ -0.23
RNF39-201ENST00000244360 SPRR1BP22528 89 aa13.6□□□□□ -0.23
RNF39-201ENST00000244360 PANO1I0J062 215 aa13.6□□□□□ -0.23
RNF39-201ENST00000244360 UBE2AP49459 152 aa13.56□□□□□ -0.24
RNF39-201ENST00000244360 SPACA4Q8TDM5 124 aa13.55□□□□□ -0.24
RNF39-201ENST00000244360 ZCCHC13Q8WW36 166 aaKnown RBP13.55□□□□□ -0.24
RNF39-201ENST00000244360 A0A087WTM6 91 aa13.54□□□□□ -0.24
RNF39-201ENST00000244360 KRTAP13-1Q8IUC0 172 aa13.54□□□□□ -0.24
RNF39-201ENST00000244360 A0A087WSZ3 146 aa13.54□□□□□ -0.24
RNF39-201ENST00000244360 A0A0G2JQZ4 141 aa13.54□□□□□ -0.24
RNF39-201ENST00000244360 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.52□□□□□ -0.25
RNF39-201ENST00000244360 Q6ZR54 194 aa13.51□□□□□ -0.25
RNF39-201ENST00000244360 MEGF8Q7Z7M0 2845 aa13.51□□□□□ -0.25
RNF39-201ENST00000244360 FAM229BQ4G0N7 80 aa13.45□□□□□ -0.26
RNF39-201ENST00000244360 DNHD1Q96M86 4753 aa13.44□□□□□ -0.26
RNF39-201ENST00000244360 DNAH17Q9UFH2 4485 aa13.44□□□□□ -0.26
RNF39-201ENST00000244360 NDUFB1O75438 58 aa13.44□□□□□ -0.26
RNF39-201ENST00000244360 DEFB116Q30KQ4 102 aa13.43□□□□□ -0.26
RNF39-201ENST00000244360 RTL8CO15255 209 aa13.43□□□□□ -0.26
RNF39-201ENST00000244360 WFDC13Q8IUB5 93 aa13.42□□□□□ -0.26
RNF39-201ENST00000244360 HECTD4Q9Y4D8 3996 aa13.42□□□□□ -0.26
RNF39-201ENST00000244360 hDV103S1A0JD37 113 aa13.41□□□□□ -0.26
RNF39-201ENST00000244360 MP68P56378 58 aa13.41□□□□□ -0.26
RNF39-201ENST00000244360 LINC00336Q6ZUF6 198 aa13.41□□□□□ -0.26
RNF39-201ENST00000244360 DNAH2Q9P225 4427 aa13.41□□□□□ -0.26
RNF39-201ENST00000244360 SRRM2Q9UQ35 2752 aaKnown RBP13.41□□□□□ -0.26
RNF39-201ENST00000244360 PRO0628Q9UI54 55 aa13.41□□□□□ -0.26
RNF39-201ENST00000244360 KRTAP29-1A8MX34 341 aaPredicted RBP13.4□□□□□ -0.26
RNF39-201ENST00000244360 CYP4F30PQ9H0H9 118 aa13.39□□□□□ -0.27
RNF39-201ENST00000244360 PRR15Q8IV56 129 aa13.38□□□□□ -0.27
RNF39-201ENST00000244360 A8MWP4 228 aa13.37□□□□□ -0.27
RNF39-201ENST00000244360 LINC00472Q9H8W2 130 aa13.36□□□□□ -0.27
RNF39-201ENST00000244360 KMT2AQ03164 3969 aa13.36□□□□□ -0.27
RNF39-201ENST00000244360 H3BPC8 53 aa13.36□□□□□ -0.27
RNF39-201ENST00000244360 RPL37AP61513 92 aaKnown RBP13.36□□□□□ -0.27
RNF39-201ENST00000244360 PLAC8Q9NZF1 115 aa13.36□□□□□ -0.27
RNF39-201ENST00000244360 CASC2Q6XLA1 102 aa13.35□□□□□ -0.27
RNF39-201ENST00000244360 MPLKIPQ8TAP9 179 aa13.35□□□□□ -0.27
RNF39-201ENST00000244360 C1orf64Q8NEQ6 169 aa13.33□□□□□ -0.27
RNF39-201ENST00000244360 LINC00483Q53H64 154 aa13.33□□□□□ -0.28
RNF39-201ENST00000244360 C1orf134Q5TEV5 83 aa13.32□□□□□ -0.28
RNF39-201ENST00000244360 IGLV5-52A0A0A0MRZ9 124 aa13.31□□□□□ -0.28
RNF39-201ENST00000244360 TRAV22A0A0B4J277 110 aa13.31□□□□□ -0.28
RNF39-201ENST00000244360 DNAH6Q9C0G6 4158 aa13.3□□□□□ -0.28
RNF39-201ENST00000244360 PSORS1C2Q9UIG4 136 aa13.29□□□□□ -0.28
RNF39-201ENST00000244360 LINC00208Q96KT6 92 aa13.27□□□□□ -0.29
RNF39-201ENST00000244360 H0Y9P7 68 aa13.26□□□□□ -0.29
RNF39-201ENST00000244360 ZNF706Q9Y5V0 76 aaPredicted RBP13.26□□□□□ -0.29
RNF39-201ENST00000244360 Q1T7F1 81 aa13.25□□□□□ -0.29
RNF39-201ENST00000244360 DNAH8Q96JB1 4490 aa13.24□□□□□ -0.29
RNF39-201ENST00000244360 SPANXA2-OT1Q8N9U9 137 aa13.24□□□□□ -0.29
RNF39-201ENST00000244360 FBN3Q75N90 2809 aa13.22□□□□□ -0.29
RNF39-201ENST00000244360 IGLV9-49A0A0B4J1Y8 123 aa13.21□□□□□ -0.29
RNF39-201ENST00000244360 ZNF861PO60384 105 aa13.21□□□□□ -0.29
RNF39-201ENST00000244360 LY6G6CO95867 125 aa13.21□□□□□ -0.29
RNF39-201ENST00000244360 BRK1Q8WUW1 75 aa13.2□□□□□ -0.3
RNF39-201ENST00000244360 WWC2-AS2Q96NR7 200 aa13.2□□□□□ -0.3
RNF39-201ENST00000244360 MMP24-AS1A0A0U1RRL7 71 aa13.19□□□□□ -0.3
RNF39-201ENST00000244360 TGP01266 2768 aa13.17□□□□□ -0.3
RNF39-201ENST00000244360 PRR4Q16378 134 aa13.17□□□□□ -0.3
RNF39-201ENST00000244360 MOBPQ13875 183 aa13.14□□□□□ -0.31
RNF39-201ENST00000244360 Q96NJ1 140 aa13.13□□□□□ -0.31
RNF39-201ENST00000244360 V9GYY9 64 aa13.13□□□□□ -0.31
RNF39-201ENST00000244360 ALMS1Q8TCU4 4167 aa13.12□□□□□ -0.31
RNF39-201ENST00000244360 TP53AIP1Q9HCN2 124 aa13.11□□□□□ -0.31
RNF39-201ENST00000244360 ASB16-AS1Q495Z4 193 aa13.1□□□□□ -0.31
RNF39-201ENST00000244360 FRAS1Q86XX4 4008 aa13.1□□□□□ -0.31
RNF39-201ENST00000244360 DNAH11Q96DT5 4516 aa13.1□□□□□ -0.31
RNF39-201ENST00000244360 IGLV7-43P04211 117 aa13.09□□□□□ -0.31
RNF39-201ENST00000244360 DNAH5Q8TE73 4624 aa13.08□□□□□ -0.32
RNF39-201ENST00000244360 ANAPC11Q9NYG5 84 aa13.07□□□□□ -0.32
RNF39-201ENST00000244360 KRTAP10-2P60368 255 aa13.06□□□□□ -0.32
RNF39-201ENST00000244360 C8orf17Q9NRJ1 99 aa13.04□□□□□ -0.32
RNF39-201ENST00000244360 KRTAP21-3Q3LHN1 58 aa13.01□□□□□ -0.33
RNF39-201ENST00000244360 CIRBP-AS1Q8TBR5 109 aa13.01□□□□□ -0.33
RNF39-201ENST00000244360 A0A1B0GVX0 72 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms