RNA–Protein interactions for RNA: ENST00000238961.8

SLF2-201, Transcript of SMC5-SMC6 complex localization factor 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLF2, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF2-201ENST00000238961 PRAC1Q96KF2 57 aa6.57□□□□□ -1.36
SLF2-201ENST00000238961 Q8N9P0 234 aaPredicted RBP6.54□□□□□ -1.36
SLF2-201ENST00000238961 TNRC18O15417 2968 aaPredicted RBP6.54□□□□□ -1.36
SLF2-201ENST00000238961 ZCCHC13Q8WW36 166 aaKnown RBP6.52□□□□□ -1.37
SLF2-201ENST00000238961 TNP2Q05952 138 aa6.52□□□□□ -1.37
SLF2-201ENST00000238961 DMDP11532 3685 aa6.51□□□□□ -1.37
SLF2-201ENST00000238961 CR1P17927 2039 aa6.51□□□□□ -1.37
SLF2-201ENST00000238961 BOD1L1Q8NFC6 3051 aa6.51□□□□□ -1.37
SLF2-201ENST00000238961 C20orf166-AS1Q96NR2 134 aa6.51□□□□□ -1.37
SLF2-201ENST00000238961 ROMO1P60602 79 aa6.5□□□□□ -1.37
SLF2-201ENST00000238961 USP9XQ93008 2570 aaPredicted RBP6.5□□□□□ -1.37
SLF2-201ENST00000238961 SETD2Q9BYW2 2564 aaPredicted RBP6.5□□□□□ -1.37
SLF2-201ENST00000238961 A0A1W2PNM2 257 aa6.5□□□□□ -1.37
SLF2-201ENST00000238961 CASC10Q5T4H9 136 aa6.5□□□□□ -1.37
SLF2-201ENST00000238961 PRR34Q9NV39 138 aa6.48□□□□□ -1.37
SLF2-201ENST00000238961 C19orf73Q9NVV2 129 aa6.47□□□□□ -1.37
SLF2-201ENST00000238961 POLQO75417 2590 aa6.47□□□□□ -1.37
SLF2-201ENST00000238961 RPL37P61927 97 aaKnown RBP6.47□□□□□ -1.37
SLF2-201ENST00000238961 CNBPP62633 177 aaKnown RBP6.47□□□□□ -1.37
SLF2-201ENST00000238961 Q75L30 129 aa6.47□□□□□ -1.37
SLF2-201ENST00000238961 USP9YO00507 2555 aaPredicted RBP6.46□□□□□ -1.38
SLF2-201ENST00000238961 DSPP15924 2871 aaKnown RBP6.45□□□□□ -1.38
SLF2-201ENST00000238961 ASPMQ8IZT6 3477 aa6.44□□□□□ -1.38
SLF2-201ENST00000238961 FRYQ5TBA9 3013 aa6.44□□□□□ -1.38
SLF2-201ENST00000238961 KRTAP16-1A8MUX0 517 aa6.44□□□□□ -1.38
SLF2-201ENST00000238961 LOC400499M0QZD8 3231 aa6.42□□□□□ -1.38
SLF2-201ENST00000238961 LINC01558Q9Y6Z2 57 aa6.42□□□□□ -1.38
SLF2-201ENST00000238961 ADM2Q7Z4H4 148 aa6.41□□□□□ -1.38
SLF2-201ENST00000238961 GIG44P09565 113 aaPredicted RBP6.4□□□□□ -1.38
SLF2-201ENST00000238961 FP248Q71RG6 208 aaPredicted RBP6.4□□□□□ -1.39
SLF2-201ENST00000238961 MTORP42345 2549 aa6.4□□□□□ -1.39
SLF2-201ENST00000238961 EIF4EBP3O60516 100 aaPredicted RBP6.39□□□□□ -1.39
SLF2-201ENST00000238961 AKAP13Q12802 2813 aa6.39□□□□□ -1.39
SLF2-201ENST00000238961 KLK9Q2XQG4 91 aa6.39□□□□□ -1.39
SLF2-201ENST00000238961 FAM229BQ4G0N7 80 aa6.39□□□□□ -1.39
SLF2-201ENST00000238961 DMXL1Q9Y485 3027 aa6.36□□□□□ -1.39
SLF2-201ENST00000238961 LAMA5O15230 3695 aa6.35□□□□□ -1.39
SLF2-201ENST00000238961 CFAP47Q6ZTR5 3102 aa6.35□□□□□ -1.39
SLF2-201ENST00000238961 MUC3AQ02505 3323 aa6.34□□□□□ -1.39
SLF2-201ENST00000238961 Q5W150 140 aa6.34□□□□□ -1.39
SLF2-201ENST00000238961 OCR1Q9BZK8 76 aa6.34□□□□□ -1.39
SLF2-201ENST00000238961 Q8NDZ9 215 aa6.33□□□□□ -1.4
SLF2-201ENST00000238961 DMXL2Q8TDJ6 3036 aa6.33□□□□□ -1.4
SLF2-201ENST00000238961 LRBAP50851 2863 aa6.33□□□□□ -1.4
SLF2-201ENST00000238961 KRTAP10-3P60369 221 aa6.33□□□□□ -1.4
SLF2-201ENST00000238961 FASNP49327 2511 aaKnown RBP6.32□□□□□ -1.4
SLF2-201ENST00000238961 EPG5Q9HCE0 2579 aa6.31□□□□□ -1.4
SLF2-201ENST00000238961 ZFHX4Q86UP3 3567 aa6.31□□□□□ -1.4
SLF2-201ENST00000238961 SPATA8Q6RVD6 105 aa6.3□□□□□ -1.4
SLF2-201ENST00000238961 OXTP01178 125 aa6.28□□□□□ -1.4
SLF2-201ENST00000238961 ZNF292O60281 2723 aa6.28□□□□□ -1.4
SLF2-201ENST00000238961 ADGRG4Q8IZF6 3080 aa6.27□□□□□ -1.41
SLF2-201ENST00000238961 MMP24-AS1A0A0U1RRL7 71 aa6.27□□□□□ -1.41
SLF2-201ENST00000238961 KALRNO60229 2985 aa6.27□□□□□ -1.41
SLF2-201ENST00000238961 MAP1AP78559 2803 aaPredicted RBP6.27□□□□□ -1.41
SLF2-201ENST00000238961 ATMQ13315 3056 aa6.26□□□□□ -1.41
SLF2-201ENST00000238961 NBEAQ8NFP9 2946 aa6.26□□□□□ -1.41
SLF2-201ENST00000238961 CENPEQ02224 2701 aa6.25□□□□□ -1.41
SLF2-201ENST00000238961 KRTAP1-3Q8IUG1 177 aa6.24□□□□□ -1.41
SLF2-201ENST00000238961 DCHS1Q96JQ0 3298 aa6.24□□□□□ -1.41
SLF2-201ENST00000238961 Q5VV11 94 aa6.23□□□□□ -1.41
SLF2-201ENST00000238961 PLAC8Q9NZF1 115 aa6.23□□□□□ -1.41
SLF2-201ENST00000238961 USP24Q9UPU5 2620 aa6.23□□□□□ -1.41
SLF2-201ENST00000238961 A0A096LNT2 108 aa6.23□□□□□ -1.41
SLF2-201ENST00000238961 CFAP46Q8IYW2 2715 aa6.21□□□□□ -1.41
SLF2-201ENST00000238961 C10orf95Q9H7T3 257 aa6.2□□□□□ -1.42
SLF2-201ENST00000238961 COL12A1Q99715 3063 aa6.18□□□□□ -1.42
SLF2-201ENST00000238961 P0C880 135 aa6.18□□□□□ -1.42
SLF2-201ENST00000238961 RELNP78509 3460 aa6.17□□□□□ -1.42
SLF2-201ENST00000238961 SPRR1BP22528 89 aa6.17□□□□□ -1.42
SLF2-201ENST00000238961 ITPR3Q14573 2671 aa6.17□□□□□ -1.42
SLF2-201ENST00000238961 KRTAP1-1Q07627 177 aa6.16□□□□□ -1.42
SLF2-201ENST00000238961 FLNAP21333 2647 aaKnown RBP6.16□□□□□ -1.42
SLF2-201ENST00000238961 A8MUU9 505 aa6.16□□□□□ -1.42
SLF2-201ENST00000238961 TACC2O95359 2948 aa6.16□□□□□ -1.42
SLF2-201ENST00000238961 PANO1I0J062 215 aa6.14□□□□□ -1.43
SLF2-201ENST00000238961 NDUFAF8A1L188 74 aa6.13□□□□□ -1.43
SLF2-201ENST00000238961 HECTD1Q9ULT8 2610 aa6.13□□□□□ -1.43
SLF2-201ENST00000238961 SMG1Q96Q15 3661 aaKnown RBP6.13□□□□□ -1.43
SLF2-201ENST00000238961 TNP1P09430 55 aa6.13□□□□□ -1.43
SLF2-201ENST00000238961 CSMD1Q96PZ7 3565 aa6.12□□□□□ -1.43
SLF2-201ENST00000238961 Q6ZR54 194 aa6.1□□□□□ -1.43
SLF2-201ENST00000238961 LCE6AA0A183 80 aa6.08□□□□□ -1.44
SLF2-201ENST00000238961 LINC00472Q9H8W2 130 aa6.08□□□□□ -1.44
SLF2-201ENST00000238961 KRTAP10-1P60331 282 aa6.07□□□□□ -1.44
SLF2-201ENST00000238961 Q5XG85 94 aa6.07□□□□□ -1.44
SLF2-201ENST00000238961 HELZ2Q9BYK8 2649 aaKnown RBP6.06□□□□□ -1.44
SLF2-201ENST00000238961 MGAM2Q2M2H8 2515 aa6.06□□□□□ -1.44
SLF2-201ENST00000238961 ZZEF1O43149 2961 aa6.05□□□□□ -1.44
SLF2-201ENST00000238961 KRTAP25-1Q3LHN0 102 aa6.04□□□□□ -1.44
SLF2-201ENST00000238961 DMBT1Q9UGM3 2413 aaPredicted RBP6.04□□□□□ -1.44
SLF2-201ENST00000238961 TEX15Q9BXT5 2789 aa6.04□□□□□ -1.44
SLF2-201ENST00000238961 A8MU10 97 aa6.03□□□□□ -1.44
SLF2-201ENST00000238961 FLNBO75369 2602 aaKnown RBP6.03□□□□□ -1.44
SLF2-201ENST00000238961 CRYBG3Q68DQ2 2970 aa6.03□□□□□ -1.44
SLF2-201ENST00000238961 KRTAP26-1Q6PEX3 210 aa6.03□□□□□ -1.44
SLF2-201ENST00000238961 ASH1LQ9NR48 2969 aaKnown RBP6.02□□□□□ -1.45
SLF2-201ENST00000238961 KRTAP10-2P60368 255 aa6.01□□□□□ -1.45
SLF2-201ENST00000238961 SPENQ96T58 3664 aaKnown RBP6.01□□□□□ -1.45
SLF2-201ENST00000238961 ASB16-AS1Q495Z4 193 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms