RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 H3BQ85 93 aa11.3□□□□□ -0.6
SNX17-201ENST00000233575 NDUFV3P56181 108 aaKnown RBP11.3□□□□□ -0.6
SNX17-201ENST00000233575 C14orf132Q9NPU4 83 aa11.3□□□□□ -0.6
SNX17-201ENST00000233575 GHRHP01286 108 aa11.3□□□□□ -0.6
SNX17-201ENST00000233575 SMR3BP02814 79 aaPredicted RBP11.29□□□□□ -0.6
SNX17-201ENST00000233575 GAGE2AQ6NT46 116 aa11.28□□□□□ -0.6
SNX17-201ENST00000233575 Q6Q795 121 aa11.27□□□□□ -0.61
SNX17-201ENST00000233575 SMIM29Q86T20 159 aa11.27□□□□□ -0.61
SNX17-201ENST00000233575 JMJD7-PLA2G4BH0Y9G9 81 aa11.26□□□□□ -0.61
SNX17-201ENST00000233575 RBM3P98179 157 aaKnown RBP11.24□□□□□ -0.61
SNX17-201ENST00000233575 SPRR4Q96PI1 79 aa11.23□□□□□ -0.61
SNX17-201ENST00000233575 SPRR1BP22528 89 aa11.21□□□□□ -0.61
SNX17-201ENST00000233575 HSPG2P98160 4391 aa11.21□□□□□ -0.61
SNX17-201ENST00000233575 ANAPC11Q9NYG5 84 aa11.2□□□□□ -0.62
SNX17-201ENST00000233575 RYR1P21817 5038 aa11.19□□□□□ -0.62
SNX17-201ENST00000233575 RPL37AP61513 92 aaKnown RBP11.19□□□□□ -0.62
SNX17-201ENST00000233575 TRBV7-4A0A0J9YYF1 115 aa11.18□□□□□ -0.62
SNX17-201ENST00000233575 DSCR8Q96T75 97 aa11.18□□□□□ -0.62
SNX17-201ENST00000233575 Q6ZQT0 140 aa11.17□□□□□ -0.62
SNX17-201ENST00000233575 FAM240AA0A1B0GVK7 77 aa11.16□□□□□ -0.62
SNX17-201ENST00000233575 CCDC179H3BU77 68 aa11.16□□□□□ -0.62
SNX17-201ENST00000233575 LINC00483Q53H64 154 aa11.16□□□□□ -0.62
SNX17-201ENST00000233575 LOC110117498A0A087WWA1 95 aa11.16□□□□□ -0.62
SNX17-201ENST00000233575 A0A0G2JQZ4 141 aa11.16□□□□□ -0.62
SNX17-201ENST00000233575 ZNF706Q9Y5V0 76 aaPredicted RBP11.16□□□□□ -0.62
SNX17-201ENST00000233575 KIAA1109Q2LD37 5005 aa11.15□□□□□ -0.62
SNX17-201ENST00000233575 CCKP06307 115 aa11.14□□□□□ -0.63
SNX17-201ENST00000233575 SMIM20Q8N5G0 67 aa11.14□□□□□ -0.63
SNX17-201ENST00000233575 F8WEM9 126 aa11.13□□□□□ -0.63
SNX17-201ENST00000233575 KRTAP10-4P60372 401 aaPredicted RBP11.13□□□□□ -0.63
SNX17-201ENST00000233575 ACYP1P07311 99 aa11.13□□□□□ -0.63
SNX17-201ENST00000233575 IGLV9-49A0A0B4J1Y8 123 aa11.11□□□□□ -0.63
SNX17-201ENST00000233575 CDK2AP2O75956 126 aa11.1□□□□□ -0.63
SNX17-201ENST00000233575 PDE6GP18545 87 aa11.09□□□□□ -0.63
SNX17-201ENST00000233575 IGLV8-61A0A075B6I0 122 aa11.09□□□□□ -0.63
SNX17-201ENST00000233575 IGFL1Q6UW32 110 aa11.09□□□□□ -0.63
SNX17-201ENST00000233575 A0A1W2PNM2 257 aa11.06□□□□□ -0.64
SNX17-201ENST00000233575 KRTAP1-4P0C5Y4 121 aa11.06□□□□□ -0.64
SNX17-201ENST00000233575 C9orf153Q5TBE3 101 aa11.06□□□□□ -0.64
SNX17-201ENST00000233575 KRTAP17-1Q9BYP8 105 aa11.06□□□□□ -0.64
SNX17-201ENST00000233575 LINC00846Q9NV44 126 aa11.05□□□□□ -0.64
SNX17-201ENST00000233575 SPINK6Q6UWN8 80 aa11.04□□□□□ -0.64
SNX17-201ENST00000233575 A0A087X002 238 aa11.04□□□□□ -0.64
SNX17-201ENST00000233575 MOBPQ13875 183 aa11.04□□□□□ -0.64
SNX17-201ENST00000233575 TRBV7-7A0A0K0K1E9 115 aa11.02□□□□□ -0.64
SNX17-201ENST00000233575 Q8NBF4 154 aa11.02□□□□□ -0.65
SNX17-201ENST00000233575 PKHD1L1Q86WI1 4243 aa11□□□□□ -0.65
SNX17-201ENST00000233575 Q6JHZ5 121 aa11□□□□□ -0.65
SNX17-201ENST00000233575 FAM229AH3BQW9 127 aa10.99□□□□□ -0.65
SNX17-201ENST00000233575 Q5VSD8 79 aa10.99□□□□□ -0.65
SNX17-201ENST00000233575 KRTAP13-2Q52LG2 175 aa10.99□□□□□ -0.65
SNX17-201ENST00000233575 IMUPQ9GZP8 106 aa10.99□□□□□ -0.65
SNX17-201ENST00000233575 PLA2G1BP04054 148 aaKnown RBP10.97□□□□□ -0.65
SNX17-201ENST00000233575 FAM229BQ4G0N7 80 aa10.96□□□□□ -0.66
SNX17-201ENST00000233575 LINC00643Q86TS7 51 aa10.95□□□□□ -0.66
SNX17-201ENST00000233575 CRYGAP11844 174 aa10.94□□□□□ -0.66
SNX17-201ENST00000233575 HRCT1Q6UXD1 115 aa10.94□□□□□ -0.66
SNX17-201ENST00000233575 UBL5Q9BZL1 73 aa10.92□□□□□ -0.66
SNX17-201ENST00000233575 A0A087WSZ3 146 aa10.91□□□□□ -0.66
SNX17-201ENST00000233575 Q6ZVQ6 151 aa10.91□□□□□ -0.66
SNX17-201ENST00000233575 PRR26Q8N8Z3 221 aa10.89□□□□□ -0.67
SNX17-201ENST00000233575 A0A1B0GW54 56 aa10.87□□□□□ -0.67
SNX17-201ENST00000233575 UQCRQO14949 82 aa10.87□□□□□ -0.67
SNX17-201ENST00000233575 SSBP3-AS1Q7Z2R9 100 aa10.87□□□□□ -0.67
SNX17-201ENST00000233575 Q8N1X5 172 aa10.87□□□□□ -0.67
SNX17-201ENST00000233575 FAM236AA0A1B0GUQ0 79 aa10.87□□□□□ -0.67
SNX17-201ENST00000233575 FAM236BA0A1B0GV22 79 aa10.87□□□□□ -0.67
SNX17-201ENST00000233575 BIRC6Q9NR09 4857 aa10.86□□□□□ -0.67
SNX17-201ENST00000233575 LRP1Q07954 4544 aaKnown RBP10.86□□□□□ -0.67
SNX17-201ENST00000233575 IGKV3D-7A0A0C4DH55 119 aa10.85□□□□□ -0.67
SNX17-201ENST00000233575 NREPQ16612 68 aa10.84□□□□□ -0.67
SNX17-201ENST00000233575 C5orf47Q569G3 176 aa10.84□□□□□ -0.67
SNX17-201ENST00000233575 TYMSOSQ8TAI1 123 aa10.84□□□□□ -0.67
SNX17-201ENST00000233575 J3KT08 172 aa10.81□□□□□ -0.68
SNX17-201ENST00000233575 RPS28P62857 69 aaKnown RBP10.8□□□□□ -0.68
SNX17-201ENST00000233575 ATP5EP2Q5VTU8 51 aa10.79□□□□□ -0.68
SNX17-201ENST00000233575 FAT3Q8TDW7 4589 aa10.79□□□□□ -0.68
SNX17-201ENST00000233575 DEFB116Q30KQ4 102 aa10.79□□□□□ -0.68
SNX17-201ENST00000233575 COX7CP15954 63 aa10.78□□□□□ -0.68
SNX17-201ENST00000233575 CD164Q04900 197 aa10.77□□□□□ -0.69
SNX17-201ENST00000233575 KRTAP4-5Q9BYR2 181 aa10.76□□□□□ -0.69
SNX17-201ENST00000233575 TNXBP22105 4242 aa10.75□□□□□ -0.69
SNX17-201ENST00000233575 MYCBP2O75592 4640 aa10.75□□□□□ -0.69
SNX17-201ENST00000233575 HIST1H4AP62805 103 aaKnown RBP10.75□□□□□ -0.69
SNX17-201ENST00000233575 FLG2Q5D862 2391 aaPredicted RBP10.74□□□□□ -0.69
SNX17-201ENST00000233575 CXCL6P80162 114 aa10.74□□□□□ -0.69
SNX17-201ENST00000233575 ATOX1O00244 68 aa10.73□□□□□ -0.69
SNX17-201ENST00000233575 BPY2O14599 106 aa10.73□□□□□ -0.69
SNX17-201ENST00000233575 LINC00472Q9H8W2 130 aa10.73□□□□□ -0.69
SNX17-201ENST00000233575 Q8N9L7 120 aa10.72□□□□□ -0.69
SNX17-201ENST00000233575 Q96NJ1 140 aa10.72□□□□□ -0.69
SNX17-201ENST00000233575 HERC2O95714 4834 aa10.71□□□□□ -0.7
SNX17-201ENST00000233575 LINC00304Q8N9R0 145 aa10.7□□□□□ -0.7
SNX17-201ENST00000233575 A0A087WVE0 104 aa10.69□□□□□ -0.7
SNX17-201ENST00000233575 DSCR10P59022 87 aa10.69□□□□□ -0.7
SNX17-201ENST00000233575 C4orf48Q5BLP8 95 aa10.68□□□□□ -0.7
SNX17-201ENST00000233575 ABCA13Q86UQ4 5058 aa10.67□□□□□ -0.7
SNX17-201ENST00000233575 TMEM258P61165 79 aa10.65□□□□□ -0.7
SNX17-201ENST00000233575 SPINK1P00995 79 aa10.65□□□□□ -0.71
SNX17-201ENST00000233575 KRTAP10-8P60410 259 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms