RNA–Protein interactions for RNA: ENST00000216106.5

HMGXB4-201, Transcript of HMG-box containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGXB4, Length 4,047 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-201ENST00000216106 RTL8CO15255 209 aa4.95□□□□□ -1.62
HMGXB4-201ENST00000216106 BPY2O14599 106 aa4.95□□□□□ -1.62
HMGXB4-201ENST00000216106 LY6G6CO95867 125 aa4.94□□□□□ -1.62
HMGXB4-201ENST00000216106 IGFL1Q6UW32 110 aa4.94□□□□□ -1.62
HMGXB4-201ENST00000216106 SPRR4Q96PI1 79 aa4.94□□□□□ -1.62
HMGXB4-201ENST00000216106 CYSTM1Q9H1C7 97 aa4.94□□□□□ -1.62
HMGXB4-201ENST00000216106 H0Y9J4 135 aa4.94□□□□□ -1.62
HMGXB4-201ENST00000216106 CRYGAP11844 174 aa4.94□□□□□ -1.62
HMGXB4-201ENST00000216106 FRAS1Q86XX4 4008 aa4.94□□□□□ -1.62
HMGXB4-201ENST00000216106 A0A1B0GW54 56 aa4.93□□□□□ -1.62
HMGXB4-201ENST00000216106 BCE1O60756 84 aa4.93□□□□□ -1.62
HMGXB4-201ENST00000216106 IGKV4-1P06312 121 aa4.93□□□□□ -1.62
HMGXB4-201ENST00000216106 DNAH17Q9UFH2 4485 aa4.93□□□□□ -1.62
HMGXB4-201ENST00000216106 C1orf134Q5TEV5 83 aa4.93□□□□□ -1.62
HMGXB4-201ENST00000216106 KRTAP13-1Q8IUC0 172 aa4.91□□□□□ -1.62
HMGXB4-201ENST00000216106 IGLV8-61A0A075B6I0 122 aa4.91□□□□□ -1.62
HMGXB4-201ENST00000216106 DNAH8Q96JB1 4490 aa4.91□□□□□ -1.62
HMGXB4-201ENST00000216106 IGLV5-52A0A0A0MRZ9 124 aa4.91□□□□□ -1.62
HMGXB4-201ENST00000216106 DNAH6Q9C0G6 4158 aa4.9□□□□□ -1.62
HMGXB4-201ENST00000216106 SPRR1BP22528 89 aa4.9□□□□□ -1.62
HMGXB4-201ENST00000216106 TRAV7A0A075B6U4 112 aa4.9□□□□□ -1.63
HMGXB4-201ENST00000216106 A0A087WSZ3 146 aa4.9□□□□□ -1.63
HMGXB4-201ENST00000216106 C20orf197Q8N268 126 aa4.9□□□□□ -1.63
HMGXB4-201ENST00000216106 DEFB116Q30KQ4 102 aa4.88□□□□□ -1.63
HMGXB4-201ENST00000216106 DSCR10P59022 87 aa4.88□□□□□ -1.63
HMGXB4-201ENST00000216106 SMIM20Q8N5G0 67 aa4.88□□□□□ -1.63
HMGXB4-201ENST00000216106 PSORS1C2Q9UIG4 136 aa4.88□□□□□ -1.63
HMGXB4-201ENST00000216106 K7EQZ3 153 aa4.88□□□□□ -1.63
HMGXB4-201ENST00000216106 PLAC8Q9NZF1 115 aa4.88□□□□□ -1.63
HMGXB4-201ENST00000216106 WWC2-AS2Q96NR7 200 aa4.87□□□□□ -1.63
HMGXB4-201ENST00000216106 HYDINQ4G0P3 5121 aa4.86□□□□□ -1.63
HMGXB4-201ENST00000216106 DNAH5Q8TE73 4624 aa4.86□□□□□ -1.63
HMGXB4-201ENST00000216106 IGLV9-49A0A0B4J1Y8 123 aa4.86□□□□□ -1.63
HMGXB4-201ENST00000216106 SNURFQ9Y675 71 aa4.86□□□□□ -1.63
HMGXB4-201ENST00000216106 KRTAP10-2P60368 255 aa4.85□□□□□ -1.63
HMGXB4-201ENST00000216106 DNAH11Q96DT5 4516 aa4.84□□□□□ -1.63
HMGXB4-201ENST00000216106 TMEM258P61165 79 aa4.84□□□□□ -1.63
HMGXB4-201ENST00000216106 KRTAP21-3Q3LHN1 58 aa4.84□□□□□ -1.63
HMGXB4-201ENST00000216106 OCR1Q9BZK8 76 aa4.84□□□□□ -1.63
HMGXB4-201ENST00000216106 RPL37AP61513 92 aaKnown RBP4.83□□□□□ -1.64
HMGXB4-201ENST00000216106 ALMS1Q8TCU4 4167 aa4.83□□□□□ -1.64
HMGXB4-201ENST00000216106 ANAPC11Q9NYG5 84 aa4.83□□□□□ -1.64
HMGXB4-201ENST00000216106 ZNF861PO60384 105 aa4.83□□□□□ -1.64
HMGXB4-201ENST00000216106 KLKP1Q107X0 134 aa4.83□□□□□ -1.64
HMGXB4-201ENST00000216106 LINC00483Q53H64 154 aa4.82□□□□□ -1.64
HMGXB4-201ENST00000216106 FAM30AQ9NZY2 134 aa4.82□□□□□ -1.64
HMGXB4-201ENST00000216106 PKD1P98161 4303 aa4.82□□□□□ -1.64
HMGXB4-201ENST00000216106 ZNF706Q9Y5V0 76 aaPredicted RBP4.82□□□□□ -1.64
HMGXB4-201ENST00000216106 FAT2Q9NYQ8 4349 aa4.82□□□□□ -1.64
HMGXB4-201ENST00000216106 HCG22E2RYF7 251 aa4.81□□□□□ -1.64
HMGXB4-201ENST00000216106 H7BZZ5 65 aa4.81□□□□□ -1.64
HMGXB4-201ENST00000216106 HRCT1Q6UXD1 115 aa4.81□□□□□ -1.64
HMGXB4-201ENST00000216106 TMEM254Q8TBM7 123 aa4.81□□□□□ -1.64
HMGXB4-201ENST00000216106 CIRBP-AS1Q8TBR5 109 aa4.81□□□□□ -1.64
HMGXB4-201ENST00000216106 MOBPQ13875 183 aa4.81□□□□□ -1.64
HMGXB4-201ENST00000216106 LINC00472Q9H8W2 130 aa4.8□□□□□ -1.64
HMGXB4-201ENST00000216106 WFDC13Q8IUB5 93 aa4.8□□□□□ -1.64
HMGXB4-201ENST00000216106 IGLV7-43P04211 117 aa4.79□□□□□ -1.64
HMGXB4-201ENST00000216106 FAM236DA0A1B0GTK5 79 aa4.77□□□□□ -1.65
HMGXB4-201ENST00000216106 FAM236CP0DP71 79 aa4.77□□□□□ -1.65
HMGXB4-201ENST00000216106 KRTAP10-1P60331 282 aa4.77□□□□□ -1.65
HMGXB4-201ENST00000216106 A8MWP4 228 aa4.77□□□□□ -1.65
HMGXB4-201ENST00000216106 J3KT08 172 aa4.77□□□□□ -1.65
HMGXB4-201ENST00000216106 PRR15Q8IV56 129 aa4.77□□□□□ -1.65
HMGXB4-201ENST00000216106 A0A0U1RQV1 116 aa4.77□□□□□ -1.65
HMGXB4-201ENST00000216106 LRP1BQ9NZR2 4599 aa4.76□□□□□ -1.65
HMGXB4-201ENST00000216106 Q96NJ1 140 aa4.76□□□□□ -1.65
HMGXB4-201ENST00000216106 NDUFC1O43677 76 aa4.75□□□□□ -1.65
HMGXB4-201ENST00000216106 Q6ZSA8 131 aa4.75□□□□□ -1.65
HMGXB4-201ENST00000216106 KRTAP29-1A8MX34 341 aaPredicted RBP4.75□□□□□ -1.65
HMGXB4-201ENST00000216106 CASC2Q6XLA1 102 aa4.75□□□□□ -1.65
HMGXB4-201ENST00000216106 PKHD1P08F94 4074 aa4.74□□□□□ -1.65
HMGXB4-201ENST00000216106 OXTP01178 125 aa4.74□□□□□ -1.65
HMGXB4-201ENST00000216106 LCE6AA0A183 80 aa4.74□□□□□ -1.65
HMGXB4-201ENST00000216106 RPS28P62857 69 aaKnown RBP4.74□□□□□ -1.65
HMGXB4-201ENST00000216106 SACSQ9NZJ4 4579 aa4.74□□□□□ -1.65
HMGXB4-201ENST00000216106 NDUFB1O75438 58 aa4.73□□□□□ -1.65
HMGXB4-201ENST00000216106 VPS13BQ7Z7G8 4022 aa4.73□□□□□ -1.65
HMGXB4-201ENST00000216106 MMP24-AS1A0A0U1RRL7 71 aa4.72□□□□□ -1.65
HMGXB4-201ENST00000216106 C5orf47Q569G3 176 aa4.71□□□□□ -1.65
HMGXB4-201ENST00000216106 A0A087X002 238 aa4.7□□□□□ -1.66
HMGXB4-201ENST00000216106 hDV103S1A0JD37 113 aa4.7□□□□□ -1.66
HMGXB4-201ENST00000216106 IGHV6-1A0A0B4J1U7 121 aa4.69□□□□□ -1.66
HMGXB4-201ENST00000216106 ZCCHC13Q8WW36 166 aaKnown RBP4.69□□□□□ -1.66
HMGXB4-201ENST00000216106 SPINK6Q6UWN8 80 aa4.69□□□□□ -1.66
HMGXB4-201ENST00000216106 SERP1Q9Y6X1 66 aa4.69□□□□□ -1.66
HMGXB4-201ENST00000216106 A0A1B0GVX0 72 aa4.68□□□□□ -1.66
HMGXB4-201ENST00000216106 CDK2AP2O75956 126 aa4.68□□□□□ -1.66
HMGXB4-201ENST00000216106 MP68P56378 58 aa4.68□□□□□ -1.66
HMGXB4-201ENST00000216106 ATP5EP56381 51 aaPredicted RBP4.68□□□□□ -1.66
HMGXB4-201ENST00000216106 C8orf17Q9NRJ1 99 aa4.68□□□□□ -1.66
HMGXB4-201ENST00000216106 H0Y9P7 68 aa4.67□□□□□ -1.66
HMGXB4-201ENST00000216106 KRTAP13-2Q52LG2 175 aa4.67□□□□□ -1.66
HMGXB4-201ENST00000216106 SSBP3-AS1Q7Z2R9 100 aa4.67□□□□□ -1.66
HMGXB4-201ENST00000216106 LINC00208Q96KT6 92 aa4.67□□□□□ -1.66
HMGXB4-201ENST00000216106 NOTCH2NLQ7Z3S9 236 aa4.66□□□□□ -1.66
HMGXB4-201ENST00000216106 CD164Q04900 197 aa4.66□□□□□ -1.66
HMGXB4-201ENST00000216106 ASB16-AS1Q495Z4 193 aa4.66□□□□□ -1.66
HMGXB4-201ENST00000216106 KRTAP1-4P0C5Y4 121 aa4.65□□□□□ -1.67
HMGXB4-201ENST00000216106 TRAV22A0A0B4J277 110 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 299.2 ms