RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Mrpl32Q9DCI9 187 aaKnown RBP9.83□□□□□ -0.84
Trim56-201ENSMUST00000054384 Plxna2P70207 1894 aa9.83□□□□□ -0.84
Trim56-201ENSMUST00000054384 P01724 129 aa9.83□□□□□ -0.84
Trim56-201ENSMUST00000054384 P01727 129 aa9.83□□□□□ -0.84
Trim56-201ENSMUST00000054384 P01741 114 aa9.83□□□□□ -0.84
Trim56-201ENSMUST00000054384 Gm11110Q3U4K9 109 aa9.83□□□□□ -0.84
Trim56-201ENSMUST00000054384 Ube2v1Q9CZY3 147 aa9.83□□□□□ -0.84
Trim56-201ENSMUST00000054384 1700031F05RikB1AX30 191 aa9.83□□□□□ -0.84
Trim56-201ENSMUST00000054384 Anapc10Q8K2H6 185 aa9.83□□□□□ -0.84
Trim56-201ENSMUST00000054384 Samd5Q3V1H9 173 aa9.83□□□□□ -0.84
Trim56-201ENSMUST00000054384 Jpt2Q6PGH2 190 aaKnown RBP9.83□□□□□ -0.84
Trim56-201ENSMUST00000054384 Plxna4Q80UG2 1893 aa9.83□□□□□ -0.84
Trim56-201ENSMUST00000054384 PigyP0C1P0 71 aa9.83□□□□□ -0.84
Trim56-201ENSMUST00000054384 Fndc7A2AED3 737 aa9.82□□□□□ -0.84
Trim56-201ENSMUST00000054384 Bcl6bO88282 474 aa9.82□□□□□ -0.84
Trim56-201ENSMUST00000054384 Xcl1P47993 114 aa9.82□□□□□ -0.84
Trim56-201ENSMUST00000054384 Ube2wQ8VDW4 151 aa9.82□□□□□ -0.84
Trim56-201ENSMUST00000054384 ApohQ01339 345 aa9.82□□□□□ -0.84
Trim56-201ENSMUST00000054384 Trdv4Q5R1A3 115 aa9.82□□□□□ -0.84
Trim56-201ENSMUST00000054384 Hist2h2beQ64524 126 aa9.82□□□□□ -0.84
Trim56-201ENSMUST00000054384 Mrpl53Q9D1H8 118 aaKnown RBP9.82□□□□□ -0.84
Trim56-201ENSMUST00000054384 Cend1Q9JKC6 149 aa9.82□□□□□ -0.84
Trim56-201ENSMUST00000054384 Dpm2Q9Z324 84 aa9.82□□□□□ -0.84
Trim56-201ENSMUST00000054384 Klrd1O54707 179 aa9.82□□□□□ -0.84
Trim56-201ENSMUST00000054384 Ccl12Q62401 104 aa9.82□□□□□ -0.84
Trim56-201ENSMUST00000054384 Znf319Q9ERR8 581 aa9.82□□□□□ -0.84
Trim56-201ENSMUST00000054384 Cd5lQ9QWK4 352 aa9.82□□□□□ -0.84
Trim56-201ENSMUST00000054384 Cxcl14Q9WUQ5 99 aa9.82□□□□□ -0.84
Trim56-201ENSMUST00000054384 Csrp3P50462 194 aa9.82□□□□□ -0.84
Trim56-201ENSMUST00000054384 Gkn1Q9CR36 201 aa9.82□□□□□ -0.84
Trim56-201ENSMUST00000054384 Pate4Q09098 99 aa9.82□□□□□ -0.84
Trim56-201ENSMUST00000054384 Gm16503Q8C6M9 103 aa9.82□□□□□ -0.84
Trim56-201ENSMUST00000054384 Hivep3A2A884 2348 aa9.82□□□□□ -0.84
Trim56-201ENSMUST00000054384 SpinklQ8CEK3 90 aa9.82□□□□□ -0.84
Trim56-201ENSMUST00000054384 Klk4Q9Z0M1 255 aa9.81□□□□□ -0.84
Trim56-201ENSMUST00000054384 Rpl35aO55142 110 aa9.81□□□□□ -0.84
Trim56-201ENSMUST00000054384 Smim26Q3V460 107 aa9.81□□□□□ -0.84
Trim56-201ENSMUST00000054384 Igkv3-1A0A075B5P1 119 aa9.81□□□□□ -0.84
Trim56-201ENSMUST00000054384 Trav7-2Q5R1I3 112 aa9.81□□□□□ -0.84
Trim56-201ENSMUST00000054384 Plekhb2Q9QZC7 221 aa9.81□□□□□ -0.84
Trim56-201ENSMUST00000054384 Gm42517A0A1Y7VLQ2 374 aa9.81□□□□□ -0.84
Trim56-201ENSMUST00000054384 Csrp2P97314 193 aaKnown RBP9.81□□□□□ -0.84
Trim56-201ENSMUST00000054384 Ccl17F6R5P4 103 aa9.81□□□□□ -0.84
Trim56-201ENSMUST00000054384 Cox8bP48772 70 aa9.81□□□□□ -0.84
Trim56-201ENSMUST00000054384 Rnf126Q91YL2 313 aa9.81□□□□□ -0.84
Trim56-201ENSMUST00000054384 Taf15Q8BQ46 557 aaKnown RBP9.81□□□□□ -0.84
Trim56-201ENSMUST00000054384 Trav14d-3-dv8A0A075B619 120 aa9.81□□□□□ -0.84
Trim56-201ENSMUST00000054384 GhrhP16043 103 aa9.81□□□□□ -0.84
Trim56-201ENSMUST00000054384 AgerQ62151 402 aa9.81□□□□□ -0.84
Trim56-201ENSMUST00000054384 Leap2Q91V13 76 aa9.81□□□□□ -0.84
Trim56-201ENSMUST00000054384 Trav3-4A0A075B654 114 aa9.8□□□□□ -0.84
Trim56-201ENSMUST00000054384 Gpx1P11352 201 aa9.8□□□□□ -0.84
Trim56-201ENSMUST00000054384 MycbQ6P8Z1 170 aa9.8□□□□□ -0.84
Trim56-201ENSMUST00000054384 Igkv14-111A0A140T8P9 117 aa9.8□□□□□ -0.84
Trim56-201ENSMUST00000054384 Brd3osA0A1B0GRB6 84 aa9.8□□□□□ -0.84
Trim56-201ENSMUST00000054384 Wdr83osQ6ZWX0 106 aa9.8□□□□□ -0.84
Trim56-201ENSMUST00000054384 Trbv31A0A075B5J5 111 aa9.8□□□□□ -0.84
Trim56-201ENSMUST00000054384 6430628N08RikA0A0U1RQ45 177 aa9.8□□□□□ -0.84
Trim56-201ENSMUST00000054384 Rnf217D3YYI7 515 aa9.8□□□□□ -0.84
Trim56-201ENSMUST00000054384 Vmo1Q5SXG7 201 aa9.8□□□□□ -0.84
Trim56-201ENSMUST00000054384 Ankrd39Q9D2X0 183 aa9.8□□□□□ -0.84
Trim56-201ENSMUST00000054384 Igkv4-81A0A0G2JEY5 119 aa9.8□□□□□ -0.84
Trim56-201ENSMUST00000054384 Folr2Q05685 251 aa9.8□□□□□ -0.84
Trim56-201ENSMUST00000054384 Lime1Q9EQR5 269 aa9.8□□□□□ -0.84
Trim56-201ENSMUST00000054384 PdpnQ62011 172 aa9.8□□□□□ -0.84
Trim56-201ENSMUST00000054384 Tcf24V9GWT9 166 aa9.8□□□□□ -0.84
Trim56-201ENSMUST00000054384 Olfr211Q8VGH2 309 aa9.79□□□□□ -0.84
Trim56-201ENSMUST00000054384 Shisa9Q9CZN4 424 aa9.79□□□□□ -0.84
Trim56-201ENSMUST00000054384 Gm7075D3Z497 112 aa9.79□□□□□ -0.84
Trim56-201ENSMUST00000054384 Gm10447Q3UQ92 135 aa9.79□□□□□ -0.84
Trim56-201ENSMUST00000054384 Ube2d2bQ6ZWY6 147 aa9.79□□□□□ -0.84
Trim56-201ENSMUST00000054384 1700001C19RikQ8K168 210 aa9.79□□□□□ -0.84
Trim56-201ENSMUST00000054384 Q9D8L0 127 aa9.79□□□□□ -0.84
Trim56-201ENSMUST00000054384 Igkv4-72A0A0B4J1I4 117 aa9.79□□□□□ -0.84
Trim56-201ENSMUST00000054384 Timm21Q8CCM6 249 aa9.79□□□□□ -0.84
Trim56-201ENSMUST00000054384 Nit2Q9JHW2 276 aa9.79□□□□□ -0.84
Trim56-201ENSMUST00000054384 Tpsab1Q02844 273 aa9.79□□□□□ -0.84
Trim56-201ENSMUST00000054384 Gm16686Q3UMN9 131 aa9.79□□□□□ -0.84
Trim56-201ENSMUST00000054384 Znf22Q9ERU3 237 aa9.79□□□□□ -0.84
Trim56-201ENSMUST00000054384 Trav6-4A0A075B6B4 115 aa9.78□□□□□ -0.84
Trim56-201ENSMUST00000054384 Ear14F6YUX7 155 aa9.78□□□□□ -0.84
Trim56-201ENSMUST00000054384 Socs3O35718 225 aa9.78□□□□□ -0.84
Trim56-201ENSMUST00000054384 Sec16aA2AIX1 2377 aa9.78□□□□□ -0.84
Trim56-201ENSMUST00000054384 Igkv4-63A0A0G2JFU6 117 aa9.78□□□□□ -0.84
Trim56-201ENSMUST00000054384 LeprotO89013 131 aa9.78□□□□□ -0.84
Trim56-201ENSMUST00000054384 P01812 117 aa9.78□□□□□ -0.84
Trim56-201ENSMUST00000054384 SlpiP97430 131 aa9.78□□□□□ -0.84
Trim56-201ENSMUST00000054384 Gemin7Q9CWY4 129 aa9.78□□□□□ -0.84
Trim56-201ENSMUST00000054384 Cdcp2Q8BQH6 427 aa9.78□□□□□ -0.84
Trim56-201ENSMUST00000054384 Prrc2aQ7TSC1 2158 aaKnown RBP9.78□□□□□ -0.84
Trim56-201ENSMUST00000054384 Shisal2aA2A9G7 189 aa9.78□□□□□ -0.84
Trim56-201ENSMUST00000054384 P01726 129 aa9.78□□□□□ -0.84
Trim56-201ENSMUST00000054384 Gm5105Q8C6Y9 112 aa9.78□□□□□ -0.84
Trim56-201ENSMUST00000054384 MplkipQ9D011 178 aa9.78□□□□□ -0.84
Trim56-201ENSMUST00000054384 Igkv4-61A0A0G2JH00 117 aa9.78□□□□□ -0.84
Trim56-201ENSMUST00000054384 Msrb2Q78J03 175 aa9.78□□□□□ -0.84
Trim56-201ENSMUST00000054384 Pth2Q91W27 100 aa9.78□□□□□ -0.84
Trim56-201ENSMUST00000054384 Fbln5Q9WVH9 448 aa9.78□□□□□ -0.84
Trim56-201ENSMUST00000054384 Inafm2A0A1L1STD6 152 aa9.78□□□□□ -0.84
Trim56-201ENSMUST00000054384 Zcchc24B2RVL6 241 aaKnown RBP9.78□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 65 ms