RNA–Protein interactions for RNA: ENST00000625883.1

CDR1-202, Transcript of cerebellar degeneration related protein 1, humanhuman

BASIC

Gene CDR1, Length 1,485 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-202ENST00000625883 CCL22O00626 93 aa-0.81□□□□□ -2.54
CDR1-202ENST00000625883 LYSTQ99698 3801 aa-0.81□□□□□ -2.54
CDR1-202ENST00000625883 RGPD2P0DJD1 1756 aa-0.81□□□□□ -2.54
CDR1-202ENST00000625883 TEX14Q8IWB6 1497 aa-0.81□□□□□ -2.54
CDR1-202ENST00000625883 ADAMTS12P58397 1594 aa-0.82□□□□□ -2.54
CDR1-202ENST00000625883 LINC00032P0C843 101 aa-0.82□□□□□ -2.54
CDR1-202ENST00000625883 ACBD7Q8N6N7 88 aa-0.82□□□□□ -2.54
CDR1-202ENST00000625883 DPY30Q9C005 99 aa-0.82□□□□□ -2.54
CDR1-202ENST00000625883 PSENENQ9NZ42 101 aa-0.82□□□□□ -2.54
CDR1-202ENST00000625883 VPS13BQ7Z7G8 4022 aa-0.82□□□□□ -2.54
CDR1-202ENST00000625883 CLTCQ00610 1675 aaKnown RBP-0.82□□□□□ -2.54
CDR1-202ENST00000625883 PTPN23Q9H3S7 1636 aa-0.83□□□□□ -2.54
CDR1-202ENST00000625883 CCDC168Q8NDH2 2452 aa-0.83□□□□□ -2.54
CDR1-202ENST00000625883 PKD1L3Q7Z443 1732 aa-0.84□□□□□ -2.54
CDR1-202ENST00000625883 MGAM2Q2M2H8 2515 aa-0.84□□□□□ -2.54
CDR1-202ENST00000625883 F8WEM9 126 aa-0.84□□□□□ -2.54
CDR1-202ENST00000625883 IGLC2P0DOY2 106 aa-0.84□□□□□ -2.54
CDR1-202ENST00000625883 IGLC3P0DOY3 106 aa-0.84□□□□□ -2.54
CDR1-202ENST00000625883 ETDBQ3ZM63 59 aa-0.84□□□□□ -2.54
CDR1-202ENST00000625883 COL5A1-AS1Q5SY13 56 aa-0.84□□□□□ -2.54
CDR1-202ENST00000625883 WFDC13Q8IUB5 93 aa-0.84□□□□□ -2.54
CDR1-202ENST00000625883 DNAH2Q9P225 4427 aa-0.84□□□□□ -2.54
CDR1-202ENST00000625883 CUBNO60494 3623 aa-0.84□□□□□ -2.54
CDR1-202ENST00000625883 CLIP1P30622 1438 aa-0.84□□□□□ -2.54
CDR1-202ENST00000625883 QSER1Q2KHR3 1735 aa-0.84□□□□□ -2.54
CDR1-202ENST00000625883 SPG11Q96JI7 2443 aa-0.85□□□□□ -2.54
CDR1-202ENST00000625883 HMGN3Q15651 99 aa-0.85□□□□□ -2.55
CDR1-202ENST00000625883 NCMAPQ5T1S8 102 aa-0.85□□□□□ -2.55
CDR1-202ENST00000625883 SPRR2FQ96RM1 72 aa-0.85□□□□□ -2.55
CDR1-202ENST00000625883 CDKN2A-AS1Q9UH64 79 aa-0.85□□□□□ -2.55
CDR1-202ENST00000625883 D6R8Y8 96 aa-0.86□□□□□ -2.55
CDR1-202ENST00000625883 LEPROTL1O95214 131 aa-0.86□□□□□ -2.55
CDR1-202ENST00000625883 FAUP35544 74 aaKnown RBP-0.86□□□□□ -2.55
CDR1-202ENST00000625883 MUSTN1Q8IVN3 82 aa-0.86□□□□□ -2.55
CDR1-202ENST00000625883 HIGD1BQ9P298 99 aa-0.86□□□□□ -2.55
CDR1-202ENST00000625883 LAMA3Q16787 3333 aa-0.86□□□□□ -2.55
CDR1-202ENST00000625883 MTORP42345 2549 aa-0.86□□□□□ -2.55
CDR1-202ENST00000625883 APOBP04114 4563 aaKnown RBP-0.86□□□□□ -2.55
CDR1-202ENST00000625883 RIF1Q5UIP0 2472 aaKnown RBP-0.86□□□□□ -2.55
CDR1-202ENST00000625883 UQCRHLA0A096LP55 91 aa-0.86□□□□□ -2.55
CDR1-202ENST00000625883 ZNF720Q7Z2F6 126 aa-0.86□□□□□ -2.55
CDR1-202ENST00000625883 MYH4Q9Y623 1939 aa-0.86□□□□□ -2.55
CDR1-202ENST00000625883 TACC2O95359 2948 aa-0.87□□□□□ -2.55
CDR1-202ENST00000625883 PREX1Q8TCU6 1659 aa-0.87□□□□□ -2.55
CDR1-202ENST00000625883 ALKAL2Q6UX46 152 aa-0.87□□□□□ -2.55
CDR1-202ENST00000625883 MAGI2Q86UL8 1455 aa-0.87□□□□□ -2.55
CDR1-202ENST00000625883 HTTP42858 3142 aa-0.87□□□□□ -2.55
CDR1-202ENST00000625883 PDE4DIPQ5VU43 2346 aa-0.88□□□□□ -2.55
CDR1-202ENST00000625883 TEX15Q9BXT5 2789 aa-0.88□□□□□ -2.55
CDR1-202ENST00000625883 LRRK2Q5S007 2527 aa-0.88□□□□□ -2.55
CDR1-202ENST00000625883 CICQ96RK0 1608 aaPredicted RBP-0.88□□□□□ -2.55
CDR1-202ENST00000625883 ALKQ9UM73 1620 aa-0.88□□□□□ -2.55
CDR1-202ENST00000625883 ANK3Q12955 4377 aaKnown RBP-0.89□□□□□ -2.55
CDR1-202ENST00000625883 ANKRD11Q6UB99 2663 aaPredicted RBP-0.89□□□□□ -2.55
CDR1-202ENST00000625883 UBE2D4Q9Y2X8 147 aa-0.89□□□□□ -2.55
CDR1-202ENST00000625883 DNAH11Q96DT5 4516 aa-0.89□□□□□ -2.55
CDR1-202ENST00000625883 LAMA1P25391 3075 aa-0.89□□□□□ -2.55
CDR1-202ENST00000625883 ANKRD26Q9UPS8 1709 aa-0.89□□□□□ -2.55
CDR1-202ENST00000625883 ITPR1Q14643 2758 aa-0.9□□□□□ -2.55
CDR1-202ENST00000625883 ZZEF1O43149 2961 aa-0.9□□□□□ -2.55
CDR1-202ENST00000625883 EPRSP07814 1512 aaKnown RBP-0.9□□□□□ -2.55
CDR1-202ENST00000625883 UBR3Q6ZT12 1888 aa-0.91□□□□□ -2.55
CDR1-202ENST00000625883 ACACAQ13085 2346 aa-0.91□□□□□ -2.55
CDR1-202ENST00000625883 CMYA5Q8N3K9 4069 aa-0.91□□□□□ -2.55
CDR1-202ENST00000625883 RGPD1P0DJD0 1748 aa-0.91□□□□□ -2.55
CDR1-202ENST00000625883 M0R143 59 aa-0.91□□□□□ -2.55
CDR1-202ENST00000625883 FANCAO15360 1455 aa-0.91□□□□□ -2.56
CDR1-202ENST00000625883 C4AP0C0L4 1744 aa-0.91□□□□□ -2.56
CDR1-202ENST00000625883 C4BP0C0L5 1744 aa-0.91□□□□□ -2.56
CDR1-202ENST00000625883 H0YGG7 62 aa-0.92□□□□□ -2.56
CDR1-202ENST00000625883 MT1AP04731 61 aa-0.92□□□□□ -2.56
CDR1-202ENST00000625883 KRTAP20-1Q3LI63 56 aa-0.92□□□□□ -2.56
CDR1-202ENST00000625883 LRRC7Q96NW7 1537 aa-0.92□□□□□ -2.56
CDR1-202ENST00000625883 GCN1Q92616 2671 aaKnown RBP-0.92□□□□□ -2.56
CDR1-202ENST00000625883 UBR1Q8IWV7 1749 aa-0.92□□□□□ -2.56
CDR1-202ENST00000625883 COX7BP24311 80 aa-0.92□□□□□ -2.56
CDR1-202ENST00000625883 PKD1L2Q7Z442 2459 aa-0.93□□□□□ -2.56
CDR1-202ENST00000625883 DEFA5Q01523 94 aa-0.93□□□□□ -2.56
CDR1-202ENST00000625883 MYO3AQ8NEV4 1616 aa-0.94□□□□□ -2.56
CDR1-202ENST00000625883 AKAP12Q02952 1782 aa-0.94□□□□□ -2.56
CDR1-202ENST00000625883 DNAH7Q8WXX0 4024 aa-0.94□□□□□ -2.56
CDR1-202ENST00000625883 DMXL1Q9Y485 3027 aa-0.94□□□□□ -2.56
CDR1-202ENST00000625883 CEP295Q9C0D2 2601 aa-0.94□□□□□ -2.56
CDR1-202ENST00000625883 ATP10BO94823 1461 aa-0.94□□□□□ -2.56
CDR1-202ENST00000625883 ABCC10Q5T3U5 1492 aa-0.94□□□□□ -2.56
CDR1-202ENST00000625883 TROQ12816 1431 aaPredicted RBP-0.94□□□□□ -2.56
CDR1-202ENST00000625883 LRRC9Q6ZRR7 1453 aa-0.95□□□□□ -2.56
CDR1-202ENST00000625883 DNAH1Q9P2D7 4330 aa-0.95□□□□□ -2.56
CDR1-202ENST00000625883 SUPT6HQ7KZ85 1726 aaKnown RBP-0.95□□□□□ -2.56
CDR1-202ENST00000625883 RGPD8O14715 1765 aaPredicted RBP-0.96□□□□□ -2.56
CDR1-202ENST00000625883 RGPD5Q99666 1765 aa-0.96□□□□□ -2.56
CDR1-202ENST00000625883 SACSQ9NZJ4 4579 aa-0.96□□□□□ -2.56
CDR1-202ENST00000625883 NDUFA3O95167 84 aa-0.96□□□□□ -2.56
CDR1-202ENST00000625883 NMSQ5H8A3 153 aa-0.96□□□□□ -2.56
CDR1-202ENST00000625883 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.96□□□□□ -2.56
CDR1-202ENST00000625883 ITPR2Q14571 2701 aa-0.97□□□□□ -2.56
CDR1-202ENST00000625883 ATP7BP35670 1465 aa-0.97□□□□□ -2.56
CDR1-202ENST00000625883 DYNC1H1Q14204 4646 aaKnown RBP-0.97□□□□□ -2.57
CDR1-202ENST00000625883 HMGN2P05204 90 aaKnown RBP-0.98□□□□□ -2.57
CDR1-202ENST00000625883 SNHG12Q9BXW3 62 aa-0.98□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms