RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 Q6JHZ5 121 aa12.77□□□□□ -0.37
PCDHB11-202ENST00000624887 UBE2DNLQ8IWF7 75 aa12.77□□□□□ -0.37
PCDHB11-202ENST00000624887 C7orf33Q8WU49 177 aa12.77□□□□□ -0.37
PCDHB11-202ENST00000624887 KCNQ1DNQ9H478 68 aa12.77□□□□□ -0.37
PCDHB11-202ENST00000624887 LINC00846Q9NV44 126 aa12.76□□□□□ -0.37
PCDHB11-202ENST00000624887 IGLV5-37A0A075B6J1 123 aa12.76□□□□□ -0.37
PCDHB11-202ENST00000624887 CRYGAP11844 174 aa12.76□□□□□ -0.37
PCDHB11-202ENST00000624887 LYSTQ99698 3801 aa12.75□□□□□ -0.37
PCDHB11-202ENST00000624887 GHRHP01286 108 aa12.74□□□□□ -0.37
PCDHB11-202ENST00000624887 RBM3P98179 157 aaKnown RBP12.74□□□□□ -0.37
PCDHB11-202ENST00000624887 LAMTOR3Q9UHA4 124 aa12.74□□□□□ -0.37
PCDHB11-202ENST00000624887 LOC107984640A0A0U1RRK4 108 aa12.73□□□□□ -0.37
PCDHB11-202ENST00000624887 FAM168BA1KXE4 195 aa12.72□□□□□ -0.37
PCDHB11-202ENST00000624887 PRKDCP78527 4128 aaKnown RBP12.72□□□□□ -0.37
PCDHB11-202ENST00000624887 LOC110117498A0A087WWA1 95 aa12.7□□□□□ -0.38
PCDHB11-202ENST00000624887 NUPR2A6NF83 97 aa12.69□□□□□ -0.38
PCDHB11-202ENST00000624887 Q6ZQT0 140 aa12.69□□□□□ -0.38
PCDHB11-202ENST00000624887 KRTAP7-1Q8IUC3 87 aa12.69□□□□□ -0.38
PCDHB11-202ENST00000624887 CSMD3Q7Z407 3707 aa12.69□□□□□ -0.38
PCDHB11-202ENST00000624887 PSCAO43653 123 aa12.69□□□□□ -0.38
PCDHB11-202ENST00000624887 IGLV1-50A0A075B6I6 118 aa12.68□□□□□ -0.38
PCDHB11-202ENST00000624887 MEGF8Q7Z7M0 2845 aa12.67□□□□□ -0.38
PCDHB11-202ENST00000624887 CNBPP62633 177 aaKnown RBP12.67□□□□□ -0.38
PCDHB11-202ENST00000624887 PRYO14603 147 aa12.67□□□□□ -0.38
PCDHB11-202ENST00000624887 RPS28P62857 69 aaKnown RBP12.66□□□□□ -0.38
PCDHB11-202ENST00000624887 DSCR8Q96T75 97 aa12.66□□□□□ -0.38
PCDHB11-202ENST00000624887 RPL37AP8A6NKH3 93 aa12.65□□□□□ -0.38
PCDHB11-202ENST00000624887 DNAH10Q8IVF4 4471 aa12.65□□□□□ -0.38
PCDHB11-202ENST00000624887 J3KT08 172 aa12.65□□□□□ -0.38
PCDHB11-202ENST00000624887 PDE6GP18545 87 aa12.65□□□□□ -0.38
PCDHB11-202ENST00000624887 KRTAP4-16G5E9R7 235 aaPredicted RBP12.64□□□□□ -0.39
PCDHB11-202ENST00000624887 SPRR1AP35321 89 aa12.64□□□□□ -0.39
PCDHB11-202ENST00000624887 FAM19A5Q7Z5A7 132 aaPredicted RBP12.64□□□□□ -0.39
PCDHB11-202ENST00000624887 MRPL55Q7Z7F7 128 aaKnown RBP12.64□□□□□ -0.39
PCDHB11-202ENST00000624887 SERP2Q8N6R1 65 aa12.63□□□□□ -0.39
PCDHB11-202ENST00000624887 C14orf177Q52M58 125 aa12.62□□□□□ -0.39
PCDHB11-202ENST00000624887 DNAH7Q8WXX0 4024 aa12.62□□□□□ -0.39
PCDHB11-202ENST00000624887 ATP5EP2Q5VTU8 51 aa12.61□□□□□ -0.39
PCDHB11-202ENST00000624887 Q6ZRX8 168 aa12.61□□□□□ -0.39
PCDHB11-202ENST00000624887 PLECQ15149 4684 aaKnown RBP12.61□□□□□ -0.39
PCDHB11-202ENST00000624887 TRBV7-4A0A0J9YYF1 115 aa12.61□□□□□ -0.39
PCDHB11-202ENST00000624887 C16orf90A8MZG2 172 aa12.6□□□□□ -0.39
PCDHB11-202ENST00000624887 DHRS4-AS1Q9P1J3 65 aa12.6□□□□□ -0.39
PCDHB11-202ENST00000624887 IGKV3D-7A0A0C4DH55 119 aa12.6□□□□□ -0.39
PCDHB11-202ENST00000624887 NBDYA0A0U1RRE5 68 aa12.6□□□□□ -0.39
PCDHB11-202ENST00000624887 TENM2Q9NT68 2774 aa12.59□□□□□ -0.39
PCDHB11-202ENST00000624887 A0A096LNI7 61 aa12.59□□□□□ -0.39
PCDHB11-202ENST00000624887 ETDCA0A1B0GVM5 59 aa12.59□□□□□ -0.39
PCDHB11-202ENST00000624887 TMEM258P61165 79 aa12.59□□□□□ -0.39
PCDHB11-202ENST00000624887 UBL5Q9BZL1 73 aa12.58□□□□□ -0.4
PCDHB11-202ENST00000624887 M0R2N4 97 aa12.58□□□□□ -0.4
PCDHB11-202ENST00000624887 Q9BRP9 147 aa12.57□□□□□ -0.4
PCDHB11-202ENST00000624887 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.56□□□□□ -0.4
PCDHB11-202ENST00000624887 IGKV2-24A0A0C4DH68 120 aa12.54□□□□□ -0.4
PCDHB11-202ENST00000624887 LRCOL1A6NCL2 159 aa12.54□□□□□ -0.4
PCDHB11-202ENST00000624887 Q8N377 158 aa12.54□□□□□ -0.4
PCDHB11-202ENST00000624887 LINC01547P58512 204 aaPredicted RBP12.53□□□□□ -0.4
PCDHB11-202ENST00000624887 REG3GQ6UW15 175 aa12.52□□□□□ -0.4
PCDHB11-202ENST00000624887 Q6ZRN7 208 aaPredicted RBP12.52□□□□□ -0.4
PCDHB11-202ENST00000624887 A0A1W2PNN7 141 aa12.52□□□□□ -0.41
PCDHB11-202ENST00000624887 DEFB105AQ8NG35 78 aa12.52□□□□□ -0.41
PCDHB11-202ENST00000624887 A0A087WVE0 104 aa12.5□□□□□ -0.41
PCDHB11-202ENST00000624887 CYSTM1Q9H1C7 97 aa12.5□□□□□ -0.41
PCDHB11-202ENST00000624887 C9orf163Q8N9P6 203 aa12.49□□□□□ -0.41
PCDHB11-202ENST00000624887 STARD9Q9P2P6 4700 aa12.49□□□□□ -0.41
PCDHB11-202ENST00000624887 Q6ZVQ6 151 aa12.48□□□□□ -0.41
PCDHB11-202ENST00000624887 IGLV5-48A0A075B6I7 105 aa12.47□□□□□ -0.41
PCDHB11-202ENST00000624887 DPH3Q96FX2 82 aa12.47□□□□□ -0.41
PCDHB11-202ENST00000624887 BCE1O60756 84 aa12.46□□□□□ -0.41
PCDHB11-202ENST00000624887 UBE2BP63146 152 aa12.46□□□□□ -0.41
PCDHB11-202ENST00000624887 PKIGQ9Y2B9 76 aa12.46□□□□□ -0.41
PCDHB11-202ENST00000624887 VPS13DQ5THJ4 4388 aa12.46□□□□□ -0.42
PCDHB11-202ENST00000624887 FBN3Q75N90 2809 aa12.46□□□□□ -0.42
PCDHB11-202ENST00000624887 ERC2-IT1O76042 136 aa12.45□□□□□ -0.42
PCDHB11-202ENST00000624887 ST20-AS1Q8NBB2 130 aa12.45□□□□□ -0.42
PCDHB11-202ENST00000624887 CHTF8P0CG12 524 aa12.45□□□□□ -0.42
PCDHB11-202ENST00000624887 C5orf47Q569G3 176 aa12.44□□□□□ -0.42
PCDHB11-202ENST00000624887 HAMPP81172 84 aa12.41□□□□□ -0.42
PCDHB11-202ENST00000624887 TNP2Q05952 138 aa12.41□□□□□ -0.42
PCDHB11-202ENST00000624887 FAM19A1Q7Z5A9 133 aa12.4□□□□□ -0.42
PCDHB11-202ENST00000624887 LINC00474Q9P2X8 69 aa12.39□□□□□ -0.43
PCDHB11-202ENST00000624887 CXCL6P80162 114 aa12.39□□□□□ -0.43
PCDHB11-202ENST00000624887 PHF5AQ7RTV0 110 aaKnown RBP12.38□□□□□ -0.43
PCDHB11-202ENST00000624887 WWC2-AS2Q96NR7 200 aa12.37□□□□□ -0.43
PCDHB11-202ENST00000624887 PRLHP81277 87 aa12.36□□□□□ -0.43
PCDHB11-202ENST00000624887 KRTAP11-1Q8IUC1 163 aa12.35□□□□□ -0.43
PCDHB11-202ENST00000624887 Q6ZR54 194 aa12.34□□□□□ -0.43
PCDHB11-202ENST00000624887 A0A087WTM6 91 aa12.34□□□□□ -0.43
PCDHB11-202ENST00000624887 C1orf137Q5JT78 98 aa12.34□□□□□ -0.43
PCDHB11-202ENST00000624887 A0A1B0GW54 56 aa12.33□□□□□ -0.44
PCDHB11-202ENST00000624887 SMIM29Q86T20 159 aa12.33□□□□□ -0.44
PCDHB11-202ENST00000624887 OXTP01178 125 aa12.32□□□□□ -0.44
PCDHB11-202ENST00000624887 H0Y9J4 135 aa12.32□□□□□ -0.44
PCDHB11-202ENST00000624887 PANO1I0J062 215 aa12.32□□□□□ -0.44
PCDHB11-202ENST00000624887 TRAV7A0A075B6U4 112 aa12.31□□□□□ -0.44
PCDHB11-202ENST00000624887 FUSP35637 526 aaKnown RBP eCLIP12.31□□□□□ -0.44
PCDHB11-202ENST00000624887 A0A1W2PNM2 257 aa12.3□□□□□ -0.44
PCDHB11-202ENST00000624887 HIGD2AQ9BW72 106 aa12.3□□□□□ -0.44
PCDHB11-202ENST00000624887 C3orf84H3BNL1 204 aa12.3□□□□□ -0.44
PCDHB11-202ENST00000624887 NREPQ16612 68 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms