RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 A0A1W2PNN7 141 aa12.39□□□□□ -0.43
SPAST-203ENST00000615843 GIG44P09565 113 aaPredicted RBP12.39□□□□□ -0.43
SPAST-203ENST00000615843 MIR22HGQ0VDD5 57 aa12.39□□□□□ -0.43
SPAST-203ENST00000615843 LCA10Q71F78 164 aa12.39□□□□□ -0.43
SPAST-203ENST00000615843 PRRC2CQ9Y520 2896 aaKnown RBP12.37□□□□□ -0.43
SPAST-203ENST00000615843 A0A1W2PNM2 257 aa12.37□□□□□ -0.43
SPAST-203ENST00000615843 ACANP16112 2415 aa12.36□□□□□ -0.43
SPAST-203ENST00000615843 SPANXA2-OT1Q8N9U9 137 aa12.35□□□□□ -0.43
SPAST-203ENST00000615843 RTL8CO15255 209 aa12.34□□□□□ -0.43
SPAST-203ENST00000615843 SSBP3-AS1Q7Z2R9 100 aa12.34□□□□□ -0.43
SPAST-203ENST00000615843 LINC00612Q8N6U2 182 aa12.34□□□□□ -0.43
SPAST-203ENST00000615843 NBDYA0A0U1RRE5 68 aa12.33□□□□□ -0.44
SPAST-203ENST00000615843 A0A1B0GVX0 72 aa12.33□□□□□ -0.44
SPAST-203ENST00000615843 OCR1Q9BZK8 76 aa12.33□□□□□ -0.44
SPAST-203ENST00000615843 Q96NJ1 140 aa12.32□□□□□ -0.44
SPAST-203ENST00000615843 C19orf73Q9NVV2 129 aa12.31□□□□□ -0.44
SPAST-203ENST00000615843 Q1T7F1 81 aa12.3□□□□□ -0.44
SPAST-203ENST00000615843 CDC42SE1Q9NRR8 79 aa12.3□□□□□ -0.44
SPAST-203ENST00000615843 PLA2G2DQ9UNK4 145 aa12.3□□□□□ -0.44
SPAST-203ENST00000615843 F8P00451 2351 aa12.28□□□□□ -0.44
SPAST-203ENST00000615843 Q5XG85 94 aa12.28□□□□□ -0.44
SPAST-203ENST00000615843 TLX1NBP0CAT3 122 aa12.28□□□□□ -0.44
SPAST-203ENST00000615843 TYMSOSQ8TAI1 123 aa12.26□□□□□ -0.45
SPAST-203ENST00000615843 IGLV5-48A0A075B6I7 105 aa12.26□□□□□ -0.45
SPAST-203ENST00000615843 DSCR10P59022 87 aa12.26□□□□□ -0.45
SPAST-203ENST00000615843 FAM104AQ969W3 186 aa12.25□□□□□ -0.45
SPAST-203ENST00000615843 CYSTM1Q9H1C7 97 aa12.23□□□□□ -0.45
SPAST-203ENST00000615843 A0A096LNT2 108 aa12.2□□□□□ -0.46
SPAST-203ENST00000615843 DNAH12Q6ZR08 3092 aa12.19□□□□□ -0.46
SPAST-203ENST00000615843 FP248Q71RG6 208 aaPredicted RBP12.15□□□□□ -0.46
SPAST-203ENST00000615843 KRTAP24-1Q3LI83 254 aa12.15□□□□□ -0.46
SPAST-203ENST00000615843 FAM229BQ4G0N7 80 aa12.12□□□□□ -0.47
SPAST-203ENST00000615843 ZNF861PO60384 105 aa12.12□□□□□ -0.47
SPAST-203ENST00000615843 CRIPTQ9P021 101 aa12.09□□□□□ -0.47
SPAST-203ENST00000615843 SPRR4Q96PI1 79 aa12.08□□□□□ -0.48
SPAST-203ENST00000615843 RBM12B-AS1Q9P1G2 102 aa12.08□□□□□ -0.48
SPAST-203ENST00000615843 PRR26Q8N8Z3 221 aa12.08□□□□□ -0.48
SPAST-203ENST00000615843 PLA2G1BP04054 148 aaKnown RBP12.07□□□□□ -0.48
SPAST-203ENST00000615843 IGLV5-37A0A075B6J1 123 aa12.06□□□□□ -0.48
SPAST-203ENST00000615843 CASC10Q5T4H9 136 aa12.06□□□□□ -0.48
SPAST-203ENST00000615843 C9orf163Q8N9P6 203 aa12.06□□□□□ -0.48
SPAST-203ENST00000615843 ANAPC11Q9NYG5 84 aa12.06□□□□□ -0.48
SPAST-203ENST00000615843 Q75L30 129 aa12.05□□□□□ -0.48
SPAST-203ENST00000615843 APLNQ9ULZ1 77 aa12.05□□□□□ -0.48
SPAST-203ENST00000615843 KRTAP10-11P60412 298 aa12.04□□□□□ -0.48
SPAST-203ENST00000615843 IGLV7-46A0A075B6I9 117 aa12.03□□□□□ -0.48
SPAST-203ENST00000615843 KRTAP10-3P60369 221 aa12.02□□□□□ -0.49
SPAST-203ENST00000615843 Q8N9P0 234 aaPredicted RBP12□□□□□ -0.49
SPAST-203ENST00000615843 CR1P17927 2039 aa11.99□□□□□ -0.49
SPAST-203ENST00000615843 OXTP01178 125 aa11.99□□□□□ -0.49
SPAST-203ENST00000615843 CEP350Q5VT06 3117 aa11.99□□□□□ -0.49
SPAST-203ENST00000615843 FASNP49327 2511 aaKnown RBP11.98□□□□□ -0.49
SPAST-203ENST00000615843 CNBPP62633 177 aaKnown RBP11.97□□□□□ -0.49
SPAST-203ENST00000615843 PSORS1C2Q9UIG4 136 aa11.94□□□□□ -0.5
SPAST-203ENST00000615843 Q8NDZ9 215 aa11.94□□□□□ -0.5
SPAST-203ENST00000615843 USP24Q9UPU5 2620 aa11.94□□□□□ -0.5
SPAST-203ENST00000615843 BPTFQ12830 3046 aa11.93□□□□□ -0.5
SPAST-203ENST00000615843 Q8N1X5 172 aa11.93□□□□□ -0.5
SPAST-203ENST00000615843 LINC01558Q9Y6Z2 57 aa11.93□□□□□ -0.5
SPAST-203ENST00000615843 A0A087WTM6 91 aa11.92□□□□□ -0.5
SPAST-203ENST00000615843 EPG5Q9HCE0 2579 aa11.91□□□□□ -0.5
SPAST-203ENST00000615843 LINC00304Q8N9R0 145 aa11.91□□□□□ -0.5
SPAST-203ENST00000615843 K7EIL1 84 aa11.91□□□□□ -0.5
SPAST-203ENST00000615843 IGLV7-43P04211 117 aa11.91□□□□□ -0.5
SPAST-203ENST00000615843 Q5VV11 94 aa11.9□□□□□ -0.51
SPAST-203ENST00000615843 C9orf92A6NGG3 77 aa11.89□□□□□ -0.51
SPAST-203ENST00000615843 LINC01554Q52M75 96 aa11.87□□□□□ -0.51
SPAST-203ENST00000615843 MMP24-AS1A0A0U1RRL7 71 aa11.83□□□□□ -0.52
SPAST-203ENST00000615843 HRES1P13985 223 aa11.83□□□□□ -0.52
SPAST-203ENST00000615843 A0A0D9SG42 100 aa11.83□□□□□ -0.52
SPAST-203ENST00000615843 PRAC1Q96KF2 57 aa11.83□□□□□ -0.52
SPAST-203ENST00000615843 A0A0C4DFX4 3053 aa11.79□□□□□ -0.52
SPAST-203ENST00000615843 SPRR1AP35321 89 aa11.76□□□□□ -0.53
SPAST-203ENST00000615843 MGAM2Q2M2H8 2515 aa11.75□□□□□ -0.53
SPAST-203ENST00000615843 H3BS24 57 aa11.74□□□□□ -0.53
SPAST-203ENST00000615843 KRTAP1-3Q8IUG1 177 aa11.73□□□□□ -0.53
SPAST-203ENST00000615843 SPINK7P58062 85 aa11.73□□□□□ -0.53
SPAST-203ENST00000615843 PCNTO95613 3336 aa11.72□□□□□ -0.53
SPAST-203ENST00000615843 A0A1B0GU33 70 aa11.72□□□□□ -0.53
SPAST-203ENST00000615843 WWC2-AS2Q96NR7 200 aa11.68□□□□□ -0.54
SPAST-203ENST00000615843 LINC00472Q9H8W2 130 aa11.67□□□□□ -0.54
SPAST-203ENST00000615843 KRTAP1-1Q07627 177 aa11.66□□□□□ -0.54
SPAST-203ENST00000615843 C5orf42Q9H799 3197 aa11.65□□□□□ -0.55
SPAST-203ENST00000615843 CHD7Q9P2D1 2997 aa11.64□□□□□ -0.55
SPAST-203ENST00000615843 FLNAP21333 2647 aaKnown RBP11.64□□□□□ -0.55
SPAST-203ENST00000615843 CSAG1Q6PB30 78 aa11.63□□□□□ -0.55
SPAST-203ENST00000615843 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.61□□□□□ -0.55
SPAST-203ENST00000615843 HECTD1Q9ULT8 2610 aa11.6□□□□□ -0.55
SPAST-203ENST00000615843 SPRR1BP22528 89 aa11.59□□□□□ -0.55
SPAST-203ENST00000615843 SMR3BP02814 79 aaPredicted RBP11.59□□□□□ -0.55
SPAST-203ENST00000615843 LUZP6Q538Z0 58 aa11.55□□□□□ -0.56
SPAST-203ENST00000615843 ATRQ13535 2644 aa11.55□□□□□ -0.56
SPAST-203ENST00000615843 UTRNP46939 3433 aa11.55□□□□□ -0.56
SPAST-203ENST00000615843 Q5W150 140 aa11.55□□□□□ -0.56
SPAST-203ENST00000615843 CFAP54Q96N23 3096 aa11.54□□□□□ -0.56
SPAST-203ENST00000615843 TNP2Q05952 138 aa11.52□□□□□ -0.57
SPAST-203ENST00000615843 FLNBO75369 2602 aaKnown RBP11.51□□□□□ -0.57
SPAST-203ENST00000615843 ITPR3Q14573 2671 aa11.51□□□□□ -0.57
SPAST-203ENST00000615843 COX6B2Q6YFQ2 88 aa11.5□□□□□ -0.57
SPAST-203ENST00000615843 AKAP13Q12802 2813 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms