RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 PDE6GP18545 87 aa8.88□□□□□ -0.99
FOXN3-219ENST00000615335 Q6ZTC4 211 aa8.88□□□□□ -0.99
FOXN3-219ENST00000615335 PRYO14603 147 aa8.87□□□□□ -0.99
FOXN3-219ENST00000615335 FBN3Q75N90 2809 aa8.87□□□□□ -0.99
FOXN3-219ENST00000615335 A0A087WZ39 114 aa8.86□□□□□ -0.99
FOXN3-219ENST00000615335 Q1T7F1 81 aa8.86□□□□□ -0.99
FOXN3-219ENST00000615335 PRO0255Q9UI72 69 aa8.86□□□□□ -0.99
FOXN3-219ENST00000615335 LINC00959A0A1B0GUT2 108 aa8.84□□□□□ -0.99
FOXN3-219ENST00000615335 ZNF561-AS1K7EIQ3 104 aa8.84□□□□□ -0.99
FOXN3-219ENST00000615335 MRPL55Q7Z7F7 128 aaKnown RBP8.84□□□□□ -0.99
FOXN3-219ENST00000615335 DEFB131BA0A096LNP1 70 aa8.83□□□□□ -1
FOXN3-219ENST00000615335 H3BQ85 93 aa8.83□□□□□ -1
FOXN3-219ENST00000615335 GYPEP15421 78 aa8.83□□□□□ -1
FOXN3-219ENST00000615335 C6orf223Q8N319 242 aa8.83□□□□□ -1
FOXN3-219ENST00000615335 BPY2O14599 106 aa8.82□□□□□ -1
FOXN3-219ENST00000615335 TGP01266 2768 aa8.81□□□□□ -1
FOXN3-219ENST00000615335 A0A096LPF7 62 aa8.8□□□□□ -1
FOXN3-219ENST00000615335 hDV103S1A0JD37 113 aa8.8□□□□□ -1
FOXN3-219ENST00000615335 A0A1B0GUV1 79 aa8.79□□□□□ -1
FOXN3-219ENST00000615335 Q8IZM0 81 aa8.78□□□□□ -1
FOXN3-219ENST00000615335 CLPSL2Q6UWE3 100 aa8.77□□□□□ -1.01
FOXN3-219ENST00000615335 H3BNG1 76 aa8.76□□□□□ -1.01
FOXN3-219ENST00000615335 Q6ZRP5 223 aa8.75□□□□□ -1.01
FOXN3-219ENST00000615335 OCR1Q9BZK8 76 aa8.75□□□□□ -1.01
FOXN3-219ENST00000615335 LINC00575Q6W349 94 aa8.74□□□□□ -1.01
FOXN3-219ENST00000615335 M0R2N4 97 aa8.73□□□□□ -1.01
FOXN3-219ENST00000615335 KTN1-AS1Q86SY8 53 aa8.73□□□□□ -1.01
FOXN3-219ENST00000615335 CSMD3Q7Z407 3707 aa8.73□□□□□ -1.01
FOXN3-219ENST00000615335 UBE2BP63146 152 aa8.72□□□□□ -1.01
FOXN3-219ENST00000615335 LINC00269Q8N2A0 174 aa8.72□□□□□ -1.01
FOXN3-219ENST00000615335 CD164L2Q6UWJ8 174 aa8.72□□□□□ -1.01
FOXN3-219ENST00000615335 MUC7Q8TAX7 377 aa8.72□□□□□ -1.01
FOXN3-219ENST00000615335 KIAA0087Q14695 138 aa8.7□□□□□ -1.02
FOXN3-219ENST00000615335 CHCHD10Q8WYQ3 142 aaPredicted RBP8.7□□□□□ -1.02
FOXN3-219ENST00000615335 DNAH7Q8WXX0 4024 aa8.7□□□□□ -1.02
FOXN3-219ENST00000615335 NUPR2A6NF83 97 aa8.7□□□□□ -1.02
FOXN3-219ENST00000615335 ANGP03950 147 aaKnown RBP8.7□□□□□ -1.02
FOXN3-219ENST00000615335 TRAV22A0A0B4J277 110 aa8.69□□□□□ -1.02
FOXN3-219ENST00000615335 COX17Q14061 63 aa8.69□□□□□ -1.02
FOXN3-219ENST00000615335 C6orf99Q4VX62 202 aa8.69□□□□□ -1.02
FOXN3-219ENST00000615335 SCXQ7RTU7 201 aa8.69□□□□□ -1.02
FOXN3-219ENST00000615335 HIGD2AQ9BW72 106 aa8.69□□□□□ -1.02
FOXN3-219ENST00000615335 RBM12B-AS1Q9P1G2 102 aa8.69□□□□□ -1.02
FOXN3-219ENST00000615335 IGLV10-54A0A075B6I4 117 aa8.69□□□□□ -1.02
FOXN3-219ENST00000615335 PRR3P79522 188 aaKnown RBP8.69□□□□□ -1.02
FOXN3-219ENST00000615335 REG3AQ06141 175 aa8.69□□□□□ -1.02
FOXN3-219ENST00000615335 C1orf64Q8NEQ6 169 aa8.68□□□□□ -1.02
FOXN3-219ENST00000615335 LELP1Q5T871 98 aa8.68□□□□□ -1.02
FOXN3-219ENST00000615335 PSPHP1O15172 72 aa8.67□□□□□ -1.02
FOXN3-219ENST00000615335 TENM2Q9NT68 2774 aa8.67□□□□□ -1.02
FOXN3-219ENST00000615335 NDUFS5O43920 106 aa8.66□□□□□ -1.02
FOXN3-219ENST00000615335 IGKV4-1P06312 121 aa8.66□□□□□ -1.02
FOXN3-219ENST00000615335 LINC00588Q9Y4M8 146 aa8.66□□□□□ -1.02
FOXN3-219ENST00000615335 C9orf116Q5BN46 136 aaPredicted RBP8.65□□□□□ -1.02
FOXN3-219ENST00000615335 WWC2-AS2Q96NR7 200 aa8.65□□□□□ -1.02
FOXN3-219ENST00000615335 APLNQ9ULZ1 77 aa8.65□□□□□ -1.02
FOXN3-219ENST00000615335 SYCNQ0VAF6 134 aa8.64□□□□□ -1.03
FOXN3-219ENST00000615335 LYSTQ99698 3801 aa8.64□□□□□ -1.03
FOXN3-219ENST00000615335 LCE6AA0A183 80 aa8.64□□□□□ -1.03
FOXN3-219ENST00000615335 CYP4F30PQ9H0H9 118 aa8.64□□□□□ -1.03
FOXN3-219ENST00000615335 UBE2AP49459 152 aa8.63□□□□□ -1.03
FOXN3-219ENST00000615335 C4orf48Q5BLP8 95 aa8.63□□□□□ -1.03
FOXN3-219ENST00000615335 DYNC2H1Q8NCM8 4307 aaKnown RBP8.63□□□□□ -1.03
FOXN3-219ENST00000615335 STARD9Q9P2P6 4700 aa8.63□□□□□ -1.03
FOXN3-219ENST00000615335 LRCOL1A6NCL2 159 aa8.62□□□□□ -1.03
FOXN3-219ENST00000615335 COX7BP24311 80 aa8.62□□□□□ -1.03
FOXN3-219ENST00000615335 Q6ZQY7 126 aa8.62□□□□□ -1.03
FOXN3-219ENST00000615335 WFDC10BQ8IUB3 73 aa8.62□□□□□ -1.03
FOXN3-219ENST00000615335 M0R378 163 aa8.61□□□□□ -1.03
FOXN3-219ENST00000615335 SPAG11BQ08648 103 aa8.61□□□□□ -1.03
FOXN3-219ENST00000615335 PLECQ15149 4684 aaKnown RBP8.61□□□□□ -1.03
FOXN3-219ENST00000615335 PSCAO43653 123 aa8.61□□□□□ -1.03
FOXN3-219ENST00000615335 Q8NDZ9 215 aa8.61□□□□□ -1.03
FOXN3-219ENST00000615335 UNQ6190/PRO20217Q6UXQ8 127 aa8.6□□□□□ -1.03
FOXN3-219ENST00000615335 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.6□□□□□ -1.03
FOXN3-219ENST00000615335 C10orf25Q5T742 122 aa8.6□□□□□ -1.03
FOXN3-219ENST00000615335 UBE2DNLQ8IWF7 75 aa8.6□□□□□ -1.03
FOXN3-219ENST00000615335 A8MUN3 132 aa8.59□□□□□ -1.03
FOXN3-219ENST00000615335 KLK12Q9UKR0 248 aa8.58□□□□□ -1.04
FOXN3-219ENST00000615335 ATP11AUNQ6ZP68 121 aa8.58□□□□□ -1.04
FOXN3-219ENST00000615335 PHF5AQ7RTV0 110 aaKnown RBP8.58□□□□□ -1.04
FOXN3-219ENST00000615335 ZCCHC13Q8WW36 166 aaKnown RBP8.58□□□□□ -1.04
FOXN3-219ENST00000615335 Q5VV11 94 aa8.57□□□□□ -1.04
FOXN3-219ENST00000615335 CASC10Q5T4H9 136 aa8.56□□□□□ -1.04
FOXN3-219ENST00000615335 Q8N9L7 120 aa8.56□□□□□ -1.04
FOXN3-219ENST00000615335 PRR34Q9NV39 138 aa8.56□□□□□ -1.04
FOXN3-219ENST00000615335 LINC01556Q5JQF7 62 aa8.55□□□□□ -1.04
FOXN3-219ENST00000615335 DNAH10OSP0CZ25 163 aa8.55□□□□□ -1.04
FOXN3-219ENST00000615335 LIMD2Q9BT23 127 aa8.55□□□□□ -1.04
FOXN3-219ENST00000615335 C3orf84H3BNL1 204 aa8.54□□□□□ -1.04
FOXN3-219ENST00000615335 NDUFB1O75438 58 aa8.54□□□□□ -1.04
FOXN3-219ENST00000615335 IGLV6-57P01721 117 aa8.54□□□□□ -1.04
FOXN3-219ENST00000615335 FAM30AQ9NZY2 134 aa8.53□□□□□ -1.04
FOXN3-219ENST00000615335 GVQW2A0A096LPI5 108 aaPredicted RBP8.53□□□□□ -1.04
FOXN3-219ENST00000615335 DIRC1Q969H9 104 aa8.53□□□□□ -1.04
FOXN3-219ENST00000615335 C16orf90A8MZG2 172 aa8.52□□□□□ -1.05
FOXN3-219ENST00000615335 CHKB-CPT1BH3BT56 60 aa8.52□□□□□ -1.05
FOXN3-219ENST00000615335 SMIM29Q86T20 159 aa8.52□□□□□ -1.05
FOXN3-219ENST00000615335 ZNF73O43830 326 aaPredicted RBP8.51□□□□□ -1.05
FOXN3-219ENST00000615335 C6orf48Q9UBA6 75 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms