RNA–Protein interactions for RNA: ENST00000613524.4

SYCP1-209, Transcript of synaptonemal complex protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYCP1, Length 3,034 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-209ENST00000613524 KRTAP10-1P60331 282 aa3.26□□□□□ -1.89
SYCP1-209ENST00000613524 TRAV8-4A0A0B4J246 113 aa3.25□□□□□ -1.89
SYCP1-209ENST00000613524 H3BT86 120 aa3.25□□□□□ -1.89
SYCP1-209ENST00000613524 COX6A2Q02221 97 aa3.25□□□□□ -1.89
SYCP1-209ENST00000613524 C2orf82Q6UX34 121 aa3.25□□□□□ -1.89
SYCP1-209ENST00000613524 DAND5Q8N907 189 aa3.25□□□□□ -1.89
SYCP1-209ENST00000613524 UPK3BQ9BT76 320 aa3.25□□□□□ -1.89
SYCP1-209ENST00000613524 CDKN2A-AS1Q9UH64 79 aa3.25□□□□□ -1.89
SYCP1-209ENST00000613524 APOBP04114 4563 aaKnown RBP3.25□□□□□ -1.89
SYCP1-209ENST00000613524 IBA57-AS1B1ANH7 110 aa3.25□□□□□ -1.89
SYCP1-209ENST00000613524 NDUFA1O15239 70 aa3.25□□□□□ -1.89
SYCP1-209ENST00000613524 SNCGO76070 127 aa3.25□□□□□ -1.89
SYCP1-209ENST00000613524 LINC00336Q6ZUF6 198 aa3.25□□□□□ -1.89
SYCP1-209ENST00000613524 CCDC179H3BU77 68 aa3.25□□□□□ -1.89
SYCP1-209ENST00000613524 CHCHD10Q8WYQ3 142 aaPredicted RBP3.25□□□□□ -1.89
SYCP1-209ENST00000613524 SS18L2Q9UHA2 77 aa3.25□□□□□ -1.89
SYCP1-209ENST00000613524 PCLOQ9Y6V0 5065 aa3.24□□□□□ -1.89
SYCP1-209ENST00000613524 IFITM1P13164 125 aa3.24□□□□□ -1.89
SYCP1-209ENST00000613524 KRTAP15-1Q3LI76 137 aa3.24□□□□□ -1.89
SYCP1-209ENST00000613524 SOSTDC1Q6X4U4 206 aa3.24□□□□□ -1.89
SYCP1-209ENST00000613524 Q6ZRN7 208 aaPredicted RBP3.24□□□□□ -1.89
SYCP1-209ENST00000613524 MYCBP2O75592 4640 aa3.24□□□□□ -1.89
SYCP1-209ENST00000613524 FAM240AA0A1B0GVK7 77 aa3.24□□□□□ -1.89
SYCP1-209ENST00000613524 LINC00242Q5T6M2 205 aa3.24□□□□□ -1.89
SYCP1-209ENST00000613524 FAM19A3Q7Z5A8 133 aa3.24□□□□□ -1.89
SYCP1-209ENST00000613524 LINC00308Q8TCZ7 52 aa3.24□□□□□ -1.89
SYCP1-209ENST00000613524 C22orf24Q9Y442 160 aa3.24□□□□□ -1.89
SYCP1-209ENST00000613524 COX6CP09669 75 aa3.23□□□□□ -1.89
SYCP1-209ENST00000613524 DHRS4-AS1Q9P1J3 65 aa3.23□□□□□ -1.89
SYCP1-209ENST00000613524 A0A087X002 238 aa3.23□□□□□ -1.89
SYCP1-209ENST00000613524 LRCOL1A6NCL2 159 aa3.23□□□□□ -1.89
SYCP1-209ENST00000613524 SMIM1B2RUZ4 78 aa3.23□□□□□ -1.89
SYCP1-209ENST00000613524 Q8N814 137 aa3.23□□□□□ -1.89
SYCP1-209ENST00000613524 ZNF625Q96I27 306 aaPredicted RBP3.23□□□□□ -1.89
SYCP1-209ENST00000613524 ABCA13Q86UQ4 5058 aa3.23□□□□□ -1.89
SYCP1-209ENST00000613524 TRBV7-7A0A0K0K1E9 115 aa3.22□□□□□ -1.89
SYCP1-209ENST00000613524 A0A1B0GVY2 172 aa3.22□□□□□ -1.89
SYCP1-209ENST00000613524 SMIM29Q86T20 159 aa3.22□□□□□ -1.89
SYCP1-209ENST00000613524 RMI2Q96E14 147 aa3.22□□□□□ -1.89
SYCP1-209ENST00000613524 SMCR5Q8TEV8 140 aa3.22□□□□□ -1.89
SYCP1-209ENST00000613524 HERC2O95714 4834 aa3.22□□□□□ -1.89
SYCP1-209ENST00000613524 PANO1I0J062 215 aa3.22□□□□□ -1.89
SYCP1-209ENST00000613524 COX7A2LO14548 114 aa3.22□□□□□ -1.89
SYCP1-209ENST00000613524 SLPIP03973 132 aa3.22□□□□□ -1.89
SYCP1-209ENST00000613524 RPL18AQ02543 176 aaKnown RBP3.22□□□□□ -1.89
SYCP1-209ENST00000613524 SS18Q15532 418 aa3.22□□□□□ -1.89
SYCP1-209ENST00000613524 SDIM1Q6ZPB5 146 aa3.22□□□□□ -1.89
SYCP1-209ENST00000613524 LINC00959A0A1B0GUT2 108 aa3.21□□□□□ -1.9
SYCP1-209ENST00000613524 HERVK_113P63121 156 aa3.21□□□□□ -1.9
SYCP1-209ENST00000613524 C9orf116Q5BN46 136 aaPredicted RBP3.21□□□□□ -1.9
SYCP1-209ENST00000613524 LCE4AQ5TA78 99 aa3.21□□□□□ -1.9
SYCP1-209ENST00000613524 CIRBPQ14011 172 aaKnown RBP3.2□□□□□ -1.9
SYCP1-209ENST00000613524 PPDPFQ9H3Y8 114 aa3.2□□□□□ -1.9
SYCP1-209ENST00000613524 CDC42SE2Q9NRR3 84 aa3.2□□□□□ -1.9
SYCP1-209ENST00000613524 CAMK2N2Q96S95 79 aa3.2□□□□□ -1.9
SYCP1-209ENST00000613524 HSPG2P98160 4391 aa3.2□□□□□ -1.9
SYCP1-209ENST00000613524 TRACP01848 142 aa3.19□□□□□ -1.9
SYCP1-209ENST00000613524 ACYP1P07311 99 aa3.19□□□□□ -1.9
SYCP1-209ENST00000613524 SCXQ7RTU7 201 aa3.19□□□□□ -1.9
SYCP1-209ENST00000613524 SPAG11BQ08648 103 aa3.19□□□□□ -1.9
SYCP1-209ENST00000613524 MPLKIPQ8TAP9 179 aa3.19□□□□□ -1.9
SYCP1-209ENST00000613524 IGKV2-28A0A075B6P5 120 aa3.19□□□□□ -1.9
SYCP1-209ENST00000613524 IGKV2D-28P01615 120 aa3.19□□□□□ -1.9
SYCP1-209ENST00000613524 BAALC-AS2P0C853 105 aa3.19□□□□□ -1.9
SYCP1-209ENST00000613524 LCE5AQ5TCM9 118 aa3.19□□□□□ -1.9
SYCP1-209ENST00000613524 Q5VSD8 79 aa3.19□□□□□ -1.9
SYCP1-209ENST00000613524 IMUPQ9GZP8 106 aa3.19□□□□□ -1.9
SYCP1-209ENST00000613524 XAGE1AQ9HD64 81 aa3.19□□□□□ -1.9
SYCP1-209ENST00000613524 EPM2AB3EWF7 344 aa3.18□□□□□ -1.9
SYCP1-209ENST00000613524 RPL28P46779 137 aaKnown RBP3.18□□□□□ -1.9
SYCP1-209ENST00000613524 MEIG1Q5JSS6 88 aa3.18□□□□□ -1.9
SYCP1-209ENST00000613524 UNQ6190/PRO20217Q6UXQ8 127 aa3.18□□□□□ -1.9
SYCP1-209ENST00000613524 LINC00337Q8N6G1 96 aa3.18□□□□□ -1.9
SYCP1-209ENST00000613524 C15orf56Q8N910 161 aa3.18□□□□□ -1.9
SYCP1-209ENST00000613524 CIRBP-AS1Q8TBR5 109 aa3.18□□□□□ -1.9
SYCP1-209ENST00000613524 HERC1Q15751 4861 aa3.18□□□□□ -1.9
SYCP1-209ENST00000613524 VPS13BQ7Z7G8 4022 aa3.18□□□□□ -1.9
SYCP1-209ENST00000613524 PFN2P35080 140 aa3.18□□□□□ -1.9
SYCP1-209ENST00000613524 C5orf47Q569G3 176 aa3.18□□□□□ -1.9
SYCP1-209ENST00000613524 C9orf129Q5T035 196 aaKnown RBP3.18□□□□□ -1.9
SYCP1-209ENST00000613524 Q6ZRU5 148 aa3.18□□□□□ -1.9
SYCP1-209ENST00000613524 FAM19A5Q7Z5A7 132 aaPredicted RBP3.18□□□□□ -1.9
SYCP1-209ENST00000613524 LINC00643Q86TS7 51 aa3.18□□□□□ -1.9
SYCP1-209ENST00000613524 FAM236AA0A1B0GUQ0 79 aa3.17□□□□□ -1.9
SYCP1-209ENST00000613524 FAM236BA0A1B0GV22 79 aa3.17□□□□□ -1.9
SYCP1-209ENST00000613524 COPS9Q8WXC6 57 aa3.17□□□□□ -1.9
SYCP1-209ENST00000613524 PRR34Q9NV39 138 aa3.17□□□□□ -1.9
SYCP1-209ENST00000613524 LRP1Q07954 4544 aaKnown RBP3.17□□□□□ -1.9
SYCP1-209ENST00000613524 A0A1B0GUV1 79 aa3.17□□□□□ -1.9
SYCP1-209ENST00000613524 FAM168BA1KXE4 195 aa3.17□□□□□ -1.9
SYCP1-209ENST00000613524 MIR7-3HGQ8N6C7 128 aa3.17□□□□□ -1.9
SYCP1-209ENST00000613524 A0A087WYN8 130 aa3.17□□□□□ -1.9
SYCP1-209ENST00000613524 A0A096LNI7 61 aa3.17□□□□□ -1.9
SYCP1-209ENST00000613524 SYCNQ0VAF6 134 aa3.17□□□□□ -1.9
SYCP1-209ENST00000613524 MRPL55Q7Z7F7 128 aaKnown RBP3.17□□□□□ -1.9
SYCP1-209ENST00000613524 COX7B2Q8TF08 81 aa3.17□□□□□ -1.9
SYCP1-209ENST00000613524 OBSCN-AS1Q96MR7 158 aa3.17□□□□□ -1.9
SYCP1-209ENST00000613524 TRAV13-2A0A0B4J235 113 aa3.16□□□□□ -1.9
SYCP1-209ENST00000613524 HIST1H4AP62805 103 aaKnown RBP3.16□□□□□ -1.9
SYCP1-209ENST00000613524 SMIM20Q8N5G0 67 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms