RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 C15orf56Q8N910 161 aa9.72□□□□□ -0.85
CDH1-213ENST00000612417 ZNF73O43830 326 aaPredicted RBP9.71□□□□□ -0.85
CDH1-213ENST00000612417 HIGD2BQ4VC39 106 aa9.71□□□□□ -0.85
CDH1-213ENST00000612417 Q6ZQY7 126 aa9.71□□□□□ -0.85
CDH1-213ENST00000612417 A0A087WVE0 104 aa9.7□□□□□ -0.86
CDH1-213ENST00000612417 ELOF1P60002 83 aaKnown RBP9.7□□□□□ -0.86
CDH1-213ENST00000612417 UBL5Q9BZL1 73 aa9.7□□□□□ -0.86
CDH1-213ENST00000612417 PDE6GP18545 87 aa9.7□□□□□ -0.86
CDH1-213ENST00000612417 LINC01556Q5JQF7 62 aa9.7□□□□□ -0.86
CDH1-213ENST00000612417 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.7□□□□□ -0.86
CDH1-213ENST00000612417 Q6ZRU5 148 aa9.7□□□□□ -0.86
CDH1-213ENST00000612417 LAMTOR3Q9UHA4 124 aa9.7□□□□□ -0.86
CDH1-213ENST00000612417 SERP1Q9Y6X1 66 aa9.69□□□□□ -0.86
CDH1-213ENST00000612417 USP17L23D6RBM5 183 aa9.68□□□□□ -0.86
CDH1-213ENST00000612417 M0R378 163 aa9.68□□□□□ -0.86
CDH1-213ENST00000612417 COX7BP24311 80 aa9.68□□□□□ -0.86
CDH1-213ENST00000612417 GHRHP01286 108 aa9.68□□□□□ -0.86
CDH1-213ENST00000612417 CYSTM1Q9H1C7 97 aa9.68□□□□□ -0.86
CDH1-213ENST00000612417 LINC00588Q9Y4M8 146 aa9.68□□□□□ -0.86
CDH1-213ENST00000612417 FAM236DA0A1B0GTK5 79 aa9.67□□□□□ -0.86
CDH1-213ENST00000612417 FAM236CP0DP71 79 aa9.67□□□□□ -0.86
CDH1-213ENST00000612417 MEGF8Q7Z7M0 2845 aa9.64□□□□□ -0.87
CDH1-213ENST00000612417 TRBV7-4A0A0J9YYF1 115 aa9.63□□□□□ -0.87
CDH1-213ENST00000612417 DNAH10OSP0CZ25 163 aa9.63□□□□□ -0.87
CDH1-213ENST00000612417 KRTAP21-3Q3LHN1 58 aa9.63□□□□□ -0.87
CDH1-213ENST00000612417 PRKDCP78527 4128 aaKnown RBP9.63□□□□□ -0.87
CDH1-213ENST00000612417 SMIM26A0A096LP01 95 aa9.63□□□□□ -0.87
CDH1-213ENST00000612417 LINC00528Q8N1L1 170 aa9.63□□□□□ -0.87
CDH1-213ENST00000612417 Q6ZRP5 223 aa9.62□□□□□ -0.87
CDH1-213ENST00000612417 IGKV2D-24A0A075B6R9 120 aa9.62□□□□□ -0.87
CDH1-213ENST00000612417 M0R2N4 97 aa9.62□□□□□ -0.87
CDH1-213ENST00000612417 FAM19A1Q7Z5A9 133 aa9.62□□□□□ -0.87
CDH1-213ENST00000612417 SYCNQ0VAF6 134 aa9.61□□□□□ -0.87
CDH1-213ENST00000612417 Q6ZVQ6 151 aa9.6□□□□□ -0.87
CDH1-213ENST00000612417 LINC01547P58512 204 aaPredicted RBP9.59□□□□□ -0.87
CDH1-213ENST00000612417 UBE2DNLQ8IWF7 75 aa9.59□□□□□ -0.87
CDH1-213ENST00000612417 CXCL6P80162 114 aa9.58□□□□□ -0.88
CDH1-213ENST00000612417 TLX1NBP0CAT3 122 aa9.57□□□□□ -0.88
CDH1-213ENST00000612417 APLNQ9ULZ1 77 aa9.57□□□□□ -0.88
CDH1-213ENST00000612417 BCE1O60756 84 aa9.57□□□□□ -0.88
CDH1-213ENST00000612417 KCNQ1DNQ9H478 68 aa9.57□□□□□ -0.88
CDH1-213ENST00000612417 CSMD3Q7Z407 3707 aa9.56□□□□□ -0.88
CDH1-213ENST00000612417 LYSTQ99698 3801 aa9.56□□□□□ -0.88
CDH1-213ENST00000612417 NUPR2A6NF83 97 aa9.55□□□□□ -0.88
CDH1-213ENST00000612417 PLA2G2DQ9UNK4 145 aa9.55□□□□□ -0.88
CDH1-213ENST00000612417 TENM2Q9NT68 2774 aa9.55□□□□□ -0.88
CDH1-213ENST00000612417 DYNC2H1Q8NCM8 4307 aaKnown RBP9.54□□□□□ -0.88
CDH1-213ENST00000612417 HAMPP81172 84 aa9.54□□□□□ -0.88
CDH1-213ENST00000612417 NKAPP1Q8N9T2 125 aa9.54□□□□□ -0.88
CDH1-213ENST00000612417 DNAH7Q8WXX0 4024 aa9.53□□□□□ -0.88
CDH1-213ENST00000612417 SERTAD4-AS1Q5TG53 156 aa9.52□□□□□ -0.88
CDH1-213ENST00000612417 C7orf33Q8WU49 177 aa9.52□□□□□ -0.88
CDH1-213ENST00000612417 RMI2Q96E14 147 aa9.52□□□□□ -0.88
CDH1-213ENST00000612417 IGLV5-37A0A075B6J1 123 aa9.51□□□□□ -0.89
CDH1-213ENST00000612417 BRK1Q8WUW1 75 aa9.51□□□□□ -0.89
CDH1-213ENST00000612417 PLECQ15149 4684 aaKnown RBP9.49□□□□□ -0.89
CDH1-213ENST00000612417 FP248Q71RG6 208 aaPredicted RBP9.48□□□□□ -0.89
CDH1-213ENST00000612417 TRAV7A0A075B6U4 112 aa9.47□□□□□ -0.89
CDH1-213ENST00000612417 A0A0U1RQV1 116 aa9.47□□□□□ -0.89
CDH1-213ENST00000612417 KRTAP4-16G5E9R7 235 aaPredicted RBP9.47□□□□□ -0.89
CDH1-213ENST00000612417 PRYO14603 147 aa9.47□□□□□ -0.89
CDH1-213ENST00000612417 ATP5EP56381 51 aaPredicted RBP9.47□□□□□ -0.89
CDH1-213ENST00000612417 PMAIP1Q13794 54 aa9.47□□□□□ -0.89
CDH1-213ENST00000612417 SPRR1AP35321 89 aa9.47□□□□□ -0.89
CDH1-213ENST00000612417 CASC10Q5T4H9 136 aa9.47□□□□□ -0.89
CDH1-213ENST00000612417 DHRS4-AS1Q9P1J3 65 aa9.47□□□□□ -0.89
CDH1-213ENST00000612417 Q6ZRX8 168 aa9.46□□□□□ -0.89
CDH1-213ENST00000612417 STARD9Q9P2P6 4700 aa9.46□□□□□ -0.9
CDH1-213ENST00000612417 IGLV1-50A0A075B6I6 118 aa9.46□□□□□ -0.9
CDH1-213ENST00000612417 IGLV5-48A0A075B6I7 105 aa9.46□□□□□ -0.9
CDH1-213ENST00000612417 Q8N377 158 aa9.46□□□□□ -0.9
CDH1-213ENST00000612417 KRTAP1-5Q9BYS1 174 aa9.46□□□□□ -0.9
CDH1-213ENST00000612417 CD164Q04900 197 aa9.45□□□□□ -0.9
CDH1-213ENST00000612417 DNAH1Q9P2D7 4330 aa9.45□□□□□ -0.9
CDH1-213ENST00000612417 FBN3Q75N90 2809 aa9.44□□□□□ -0.9
CDH1-213ENST00000612417 H7BZZ5 65 aa9.43□□□□□ -0.9
CDH1-213ENST00000612417 TGP01266 2768 aa9.43□□□□□ -0.9
CDH1-213ENST00000612417 FAM168BA1KXE4 195 aa9.43□□□□□ -0.9
CDH1-213ENST00000612417 PSCAO43653 123 aa9.43□□□□□ -0.9
CDH1-213ENST00000612417 KRTAP7-1Q8IUC3 87 aa9.43□□□□□ -0.9
CDH1-213ENST00000612417 Q9BRP9 147 aa9.43□□□□□ -0.9
CDH1-213ENST00000612417 C20orf197Q8N268 126 aa9.42□□□□□ -0.9
CDH1-213ENST00000612417 A0A1B0GW54 56 aa9.41□□□□□ -0.9
CDH1-213ENST00000612417 SCXQ7RTU7 201 aa9.41□□□□□ -0.9
CDH1-213ENST00000612417 RPL37AP8A6NKH3 93 aa9.41□□□□□ -0.9
CDH1-213ENST00000612417 ETDCA0A1B0GVM5 59 aa9.4□□□□□ -0.9
CDH1-213ENST00000612417 DEFB105AQ8NG35 78 aa9.4□□□□□ -0.9
CDH1-213ENST00000612417 NBDYA0A0U1RRE5 68 aa9.4□□□□□ -0.91
CDH1-213ENST00000612417 NDUFC1O43677 76 aa9.4□□□□□ -0.91
CDH1-213ENST00000612417 TNP2Q05952 138 aa9.4□□□□□ -0.91
CDH1-213ENST00000612417 KLKP1Q107X0 134 aa9.4□□□□□ -0.91
CDH1-213ENST00000612417 PRR15Q8IV56 129 aa9.4□□□□□ -0.91
CDH1-213ENST00000612417 NREPQ16612 68 aa9.39□□□□□ -0.91
CDH1-213ENST00000612417 MRPL55Q7Z7F7 128 aaKnown RBP9.39□□□□□ -0.91
CDH1-213ENST00000612417 DNAH10Q8IVF4 4471 aa9.37□□□□□ -0.91
CDH1-213ENST00000612417 IGKV4-1P06312 121 aa9.37□□□□□ -0.91
CDH1-213ENST00000612417 C3orf84H3BNL1 204 aa9.35□□□□□ -0.91
CDH1-213ENST00000612417 FUSP35637 526 aaKnown RBP eCLIP9.35□□□□□ -0.91
CDH1-213ENST00000612417 BPY2O14599 106 aa9.34□□□□□ -0.91
CDH1-213ENST00000612417 A0A1W2PNM2 257 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms