RNA–Protein interactions for RNA: ENST00000610454.4

SENP3-209, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-209ENST00000610454 KRTAP4-16G5E9R7 235 aaPredicted RBP7.86□□□□□ -1.15
SENP3-209ENST00000610454 HINT1P49773 126 aaPredicted RBP7.86□□□□□ -1.15
SENP3-209ENST00000610454 JOSD1Q15040 202 aaPredicted RBP7.86□□□□□ -1.15
SENP3-209ENST00000610454 COPS9Q8WXC6 57 aa7.86□□□□□ -1.15
SENP3-209ENST00000610454 LITAFQ99732 161 aa7.86□□□□□ -1.15
SENP3-209ENST00000610454 UBR4Q5T4S7 5183 aa7.86□□□□□ -1.15
SENP3-209ENST00000610454 LRP2P98164 4655 aa7.85□□□□□ -1.15
SENP3-209ENST00000610454 B5MCH6 92 aa7.85□□□□□ -1.15
SENP3-209ENST00000610454 EIF4EBP3O60516 100 aaPredicted RBP7.85□□□□□ -1.15
SENP3-209ENST00000610454 Q6ZRX8 168 aa7.85□□□□□ -1.15
SENP3-209ENST00000610454 ZNF73O43830 326 aaPredicted RBP7.84□□□□□ -1.15
SENP3-209ENST00000610454 SNRPEP62304 92 aaKnown RBP7.84□□□□□ -1.15
SENP3-209ENST00000610454 ANKRD39Q53RE8 183 aa7.84□□□□□ -1.15
SENP3-209ENST00000610454 HIST3H2BBQ8N257 126 aa7.84□□□□□ -1.15
SENP3-209ENST00000610454 HSBP1L1C9JCN9 74 aa7.83□□□□□ -1.16
SENP3-209ENST00000610454 LINC00518Q8N0U6 118 aa7.83□□□□□ -1.16
SENP3-209ENST00000610454 C3orf22Q8N5N4 141 aa7.83□□□□□ -1.16
SENP3-209ENST00000610454 HIST1H2BLQ99880 126 aa7.83□□□□□ -1.16
SENP3-209ENST00000610454 PPDPFQ9H3Y8 114 aa7.83□□□□□ -1.16
SENP3-209ENST00000610454 GAGE2AQ6NT46 116 aa7.82□□□□□ -1.16
SENP3-209ENST00000610454 SPANXDQ9BXN6 97 aa7.82□□□□□ -1.16
SENP3-209ENST00000610454 C4orf48Q5BLP8 95 aa7.81□□□□□ -1.16
SENP3-209ENST00000610454 IFITM1P13164 125 aa7.8□□□□□ -1.16
SENP3-209ENST00000610454 Q6ZVH6 145 aa7.8□□□□□ -1.16
SENP3-209ENST00000610454 Q9BRP9 147 aa7.8□□□□□ -1.16
SENP3-209ENST00000610454 CTAG1AP78358 180 aa7.79□□□□□ -1.16
SENP3-209ENST00000610454 SPAG11AQ6PDA7 123 aa7.79□□□□□ -1.16
SENP3-209ENST00000610454 PCP2Q8IVA1 136 aa7.79□□□□□ -1.16
SENP3-209ENST00000610454 ERC2-IT1O76042 136 aa7.78□□□□□ -1.16
SENP3-209ENST00000610454 LINC00483Q53H64 154 aa7.78□□□□□ -1.16
SENP3-209ENST00000610454 IGLV9-49A0A0B4J1Y8 123 aa7.77□□□□□ -1.17
SENP3-209ENST00000610454 Q8NBF4 154 aa7.76□□□□□ -1.17
SENP3-209ENST00000610454 A6NDN8 102 aa7.75□□□□□ -1.17
SENP3-209ENST00000610454 SCGB1D1O95968 90 aa7.75□□□□□ -1.17
SENP3-209ENST00000610454 MOBPQ13875 183 aa7.75□□□□□ -1.17
SENP3-209ENST00000610454 MUSTN1Q8IVN3 82 aa7.75□□□□□ -1.17
SENP3-209ENST00000610454 RETNLBQ9BQ08 111 aa7.75□□□□□ -1.17
SENP3-209ENST00000610454 DHRS4-AS1Q9P1J3 65 aa7.75□□□□□ -1.17
SENP3-209ENST00000610454 C5orf52A6NGY3 159 aa7.74□□□□□ -1.17
SENP3-209ENST00000610454 COX7BP24311 80 aa7.74□□□□□ -1.17
SENP3-209ENST00000610454 C6orf99Q4VX62 202 aa7.74□□□□□ -1.17
SENP3-209ENST00000610454 C9orf153Q5TBE3 101 aa7.73□□□□□ -1.17
SENP3-209ENST00000610454 ELOF1P60002 83 aaKnown RBP7.72□□□□□ -1.17
SENP3-209ENST00000610454 SLC25A34Q6PIV7 304 aa7.72□□□□□ -1.17
SENP3-209ENST00000610454 SSBP3-AS1Q7Z2R9 100 aa7.72□□□□□ -1.17
SENP3-209ENST00000610454 TRAV13-2A0A0B4J235 113 aa7.71□□□□□ -1.18
SENP3-209ENST00000610454 SPINK1P00995 79 aa7.71□□□□□ -1.18
SENP3-209ENST00000610454 ST20-AS1Q8NBB2 130 aa7.71□□□□□ -1.18
SENP3-209ENST00000610454 LPAP08519 4548 aa7.71□□□□□ -1.18
SENP3-209ENST00000610454 IGLV7-46A0A075B6I9 117 aa7.69□□□□□ -1.18
SENP3-209ENST00000610454 TRBV7-6A0A0J9YX20 115 aa7.69□□□□□ -1.18
SENP3-209ENST00000610454 A0A1B0GWB2 263 aa7.69□□□□□ -1.18
SENP3-209ENST00000610454 TAL2Q16559 108 aa7.68□□□□□ -1.18
SENP3-209ENST00000610454 LAMTOR3Q9UHA4 124 aa7.67□□□□□ -1.18
SENP3-209ENST00000610454 A4D1N5 150 aa7.66□□□□□ -1.18
SENP3-209ENST00000610454 DEFB105AQ8NG35 78 aa7.66□□□□□ -1.18
SENP3-209ENST00000610454 HIST1H4GQ99525 98 aa7.66□□□□□ -1.18
SENP3-209ENST00000610454 CDIP1Q9H305 208 aa7.66□□□□□ -1.18
SENP3-209ENST00000610454 NHP2Q9NX24 153 aaKnown RBP7.66□□□□□ -1.18
SENP3-209ENST00000610454 RNF213Q63HN8 5207 aa7.66□□□□□ -1.18
SENP3-209ENST00000610454 SPRR1BP22528 89 aa7.65□□□□□ -1.18
SENP3-209ENST00000610454 RPS29P62273 56 aaKnown RBP7.65□□□□□ -1.18
SENP3-209ENST00000610454 VAMP3Q15836 100 aa7.65□□□□□ -1.18
SENP3-209ENST00000610454 FP248Q71RG6 208 aaPredicted RBP7.65□□□□□ -1.18
SENP3-209ENST00000610454 SLC25A20O43772 301 aa7.64□□□□□ -1.19
SENP3-209ENST00000610454 COX8AP10176 69 aa7.64□□□□□ -1.19
SENP3-209ENST00000610454 TPRXLQ17RH7 258 aa7.64□□□□□ -1.19
SENP3-209ENST00000610454 SMIM11BQ8TCY0 68 aa7.64□□□□□ -1.19
SENP3-209ENST00000610454 TEX49A0A1B0GTD5 131 aa7.63□□□□□ -1.19
SENP3-209ENST00000610454 Q1RN00 199 aa7.62□□□□□ -1.19
SENP3-209ENST00000610454 VAMP8Q9BV40 100 aa7.62□□□□□ -1.19
SENP3-209ENST00000610454 PAM16Q9Y3D7 125 aa7.62□□□□□ -1.19
SENP3-209ENST00000610454 SPATA45Q537H7 98 aa7.61□□□□□ -1.19
SENP3-209ENST00000610454 DLEU1O43261 78 aa7.6□□□□□ -1.19
SENP3-209ENST00000610454 C12orf57Q99622 126 aa7.6□□□□□ -1.19
SENP3-209ENST00000610454 Q8N377 158 aa7.59□□□□□ -1.19
SENP3-209ENST00000610454 C14orf144Q96I85 54 aa7.59□□□□□ -1.19
SENP3-209ENST00000610454 LIMD2Q9BT23 127 aa7.59□□□□□ -1.19
SENP3-209ENST00000610454 HRCT1Q6UXD1 115 aa7.58□□□□□ -1.2
SENP3-209ENST00000610454 PRO1933Q9H354 126 aa7.58□□□□□ -1.2
SENP3-209ENST00000610454 IGLV5-48A0A075B6I7 105 aa7.57□□□□□ -1.2
SENP3-209ENST00000610454 BVES-AS1Q5T3Y7 98 aa7.56□□□□□ -1.2
SENP3-209ENST00000610454 RAB37Q96AX2 223 aa7.56□□□□□ -1.2
SENP3-209ENST00000610454 hADV29S1A0JD25 119 aa7.55□□□□□ -1.2
SENP3-209ENST00000610454 F8WEM9 126 aa7.55□□□□□ -1.2
SENP3-209ENST00000610454 LINC00575Q6W349 94 aa7.55□□□□□ -1.2
SENP3-209ENST00000610454 HIGD1BQ9P298 99 aa7.55□□□□□ -1.2
SENP3-209ENST00000610454 H7C2G1 150 aa7.54□□□□□ -1.2
SENP3-209ENST00000610454 LINC01547P58512 204 aaPredicted RBP7.54□□□□□ -1.2
SENP3-209ENST00000610454 A0A0U1RQV1 116 aa7.53□□□□□ -1.2
SENP3-209ENST00000610454 CD164Q04900 197 aa7.53□□□□□ -1.2
SENP3-209ENST00000610454 KRTAP13-3Q3SY46 172 aa7.53□□□□□ -1.2
SENP3-209ENST00000610454 Q6ZQY7 126 aa7.53□□□□□ -1.2
SENP3-209ENST00000610454 TMEM238LA0A1B0GVL6 79 aa7.52□□□□□ -1.21
SENP3-209ENST00000610454 A6NJY4 79 aa7.52□□□□□ -1.21
SENP3-209ENST00000610454 SNCGO76070 127 aa7.52□□□□□ -1.21
SENP3-209ENST00000610454 SMIM29Q86T20 159 aa7.52□□□□□ -1.21
SENP3-209ENST00000610454 TMA7Q9Y2S6 64 aaKnown RBP7.52□□□□□ -1.21
SENP3-209ENST00000610454 A0A0B4J2C4 111 aa7.5□□□□□ -1.21
SENP3-209ENST00000610454 CFC1BP0CG36 223 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms