RNA–Protein interactions for RNA: ENST00000602498.1

HCG18-243, Transcript of HLA complex group 18, humanhuman

TSL 3 BASIC

Gene HCG18, Length 327 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-243ENST00000602498 KRTAP4-16G5E9R7 235 aaPredicted RBP3.25□□□□□ -1.89
HCG18-243ENST00000602498 SPRR1AP35321 89 aa3.25□□□□□ -1.89
HCG18-243ENST00000602498 KRTDAPP60985 99 aa3.25□□□□□ -1.89
HCG18-243ENST00000602498 MOBPQ13875 183 aa3.25□□□□□ -1.89
HCG18-243ENST00000602498 ANKRD39Q53RE8 183 aa3.25□□□□□ -1.89
HCG18-243ENST00000602498 ATOH7Q8N100 152 aa3.25□□□□□ -1.89
HCG18-243ENST00000602498 LINC00337Q8N6G1 96 aa3.25□□□□□ -1.89
HCG18-243ENST00000602498 ST20-AS1Q8NBB2 130 aa3.25□□□□□ -1.89
HCG18-243ENST00000602498 OR13C6PQ8NH95 151 aa3.25□□□□□ -1.89
HCG18-243ENST00000602498 Q9BRP9 147 aa3.25□□□□□ -1.89
HCG18-243ENST00000602498 CDIP1Q9H305 208 aa3.25□□□□□ -1.89
HCG18-243ENST00000602498 SPANXB1Q9NS25 103 aaPredicted RBP3.25□□□□□ -1.89
HCG18-243ENST00000602498 ZNF706Q9Y5V0 76 aaPredicted RBP3.25□□□□□ -1.89
HCG18-243ENST00000602498 TRAV23DV6A0A075B6W5 121 aa3.24□□□□□ -1.89
HCG18-243ENST00000602498 E9PLD3 99 aa3.24□□□□□ -1.89
HCG18-243ENST00000602498 NMUP48645 174 aa3.24□□□□□ -1.89
HCG18-243ENST00000602498 S100A12P80511 92 aa3.24□□□□□ -1.89
HCG18-243ENST00000602498 ZNF815PA8K554 130 aa3.23□□□□□ -1.89
HCG18-243ENST00000602498 IGLV6-57P01721 117 aa3.23□□□□□ -1.89
HCG18-243ENST00000602498 C3orf79P0CE67 100 aa3.23□□□□□ -1.89
HCG18-243ENST00000602498 C9orf153Q5TBE3 101 aa3.23□□□□□ -1.89
HCG18-243ENST00000602498 HRCT1Q6UXD1 115 aa3.23□□□□□ -1.89
HCG18-243ENST00000602498 LINC00308Q8TCZ7 52 aa3.23□□□□□ -1.89
HCG18-243ENST00000602498 LITAFQ99732 161 aa3.23□□□□□ -1.89
HCG18-243ENST00000602498 LOC107984156A0A0G2JMH3 177 aa3.22□□□□□ -1.89
HCG18-243ENST00000602498 TRBV10-2A0A0K0K1G8 114 aa3.22□□□□□ -1.89
HCG18-243ENST00000602498 ZNF73O43830 326 aaPredicted RBP3.22□□□□□ -1.89
HCG18-243ENST00000602498 LINC01545Q5VT33 79 aa3.22□□□□□ -1.89
HCG18-243ENST00000602498 PET117Q6UWS5 81 aa3.22□□□□□ -1.89
HCG18-243ENST00000602498 Q6ZRX8 168 aa3.22□□□□□ -1.89
HCG18-243ENST00000602498 ARL17AQ8IVW1 177 aa3.22□□□□□ -1.89
HCG18-243ENST00000602498 NDUFC2O95298 119 aa3.21□□□□□ -1.9
HCG18-243ENST00000602498 LINC00483Q53H64 154 aa3.21□□□□□ -1.9
HCG18-243ENST00000602498 DEFB105AQ8NG35 78 aa3.21□□□□□ -1.9
HCG18-243ENST00000602498 SPAG11AQ6PDA7 123 aa3.2□□□□□ -1.9
HCG18-243ENST00000602498 SCGB1D4Q6XE38 83 aa3.2□□□□□ -1.9
HCG18-243ENST00000602498 PCP2Q8IVA1 136 aa3.2□□□□□ -1.9
HCG18-243ENST00000602498 SPANXCQ9NY87 97 aa3.2□□□□□ -1.9
HCG18-243ENST00000602498 FAT4Q6V0I7 4981 aa3.19□□□□□ -1.9
HCG18-243ENST00000602498 A0A0G2JQZ4 141 aa3.19□□□□□ -1.9
HCG18-243ENST00000602498 A6NDN8 102 aa3.19□□□□□ -1.9
HCG18-243ENST00000602498 HINT1P49773 126 aaPredicted RBP3.19□□□□□ -1.9
HCG18-243ENST00000602498 JOSD1Q15040 202 aaPredicted RBP3.19□□□□□ -1.9
HCG18-243ENST00000602498 TPRXLQ17RH7 258 aa3.19□□□□□ -1.9
HCG18-243ENST00000602498 Q1RN00 199 aa3.19□□□□□ -1.9
HCG18-243ENST00000602498 C6orf99Q4VX62 202 aa3.19□□□□□ -1.9
HCG18-243ENST00000602498 C20orf202A1L168 122 aa3.18□□□□□ -1.9
HCG18-243ENST00000602498 H7C2G1 150 aa3.18□□□□□ -1.9
HCG18-243ENST00000602498 SPINK1P00995 79 aa3.18□□□□□ -1.9
HCG18-243ENST00000602498 COX7BP24311 80 aa3.18□□□□□ -1.9
HCG18-243ENST00000602498 KRTAP13-3Q3SY46 172 aa3.18□□□□□ -1.9
HCG18-243ENST00000602498 COA6Q5JTJ3 125 aaKnown RBP3.18□□□□□ -1.9
HCG18-243ENST00000602498 MUSTN1Q8IVN3 82 aa3.18□□□□□ -1.9
HCG18-243ENST00000602498 Q8N377 158 aa3.18□□□□□ -1.9
HCG18-243ENST00000602498 SPANXDQ9BXN6 97 aa3.18□□□□□ -1.9
HCG18-243ENST00000602498 KRTAP4-8Q9BYQ9 185 aa3.18□□□□□ -1.9
HCG18-243ENST00000602498 TIMM17BO60830 172 aa3.17□□□□□ -1.9
HCG18-243ENST00000602498 TAL2Q16559 108 aa3.17□□□□□ -1.9
HCG18-243ENST00000602498 SSBP3-AS1Q7Z2R9 100 aa3.17□□□□□ -1.9
HCG18-243ENST00000602498 A0A0U1RQV1 116 aa3.16□□□□□ -1.9
HCG18-243ENST00000602498 C9orf92A6NGG3 77 aa3.16□□□□□ -1.9
HCG18-243ENST00000602498 FP248Q71RG6 208 aaPredicted RBP3.16□□□□□ -1.9
HCG18-243ENST00000602498 LINC00518Q8N0U6 118 aa3.16□□□□□ -1.9
HCG18-243ENST00000602498 KRTAP4-1Q9BYQ7 146 aa3.16□□□□□ -1.9
HCG18-243ENST00000602498 DHRS4-AS1Q9P1J3 65 aa3.16□□□□□ -1.9
HCG18-243ENST00000602498 SLC25A20O43772 301 aa3.15□□□□□ -1.91
HCG18-243ENST00000602498 S100A2P29034 98 aa3.15□□□□□ -1.91
HCG18-243ENST00000602498 ELOF1P60002 83 aaKnown RBP3.15□□□□□ -1.91
HCG18-243ENST00000602498 HIST3H2BBQ8N257 126 aa3.15□□□□□ -1.91
HCG18-243ENST00000602498 C12orf57Q99622 126 aa3.15□□□□□ -1.91
HCG18-243ENST00000602498 HIST1H2BLQ99880 126 aa3.15□□□□□ -1.91
HCG18-243ENST00000602498 LAMTOR3Q9UHA4 124 aa3.15□□□□□ -1.91
HCG18-243ENST00000602498 SMIM11BQ8TCY0 68 aa3.14□□□□□ -1.91
HCG18-243ENST00000602498 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.13□□□□□ -1.91
HCG18-243ENST00000602498 IFITM1P13164 125 aa3.13□□□□□ -1.91
HCG18-243ENST00000602498 SPRR1BP22528 89 aa3.13□□□□□ -1.91
HCG18-243ENST00000602498 LINC01547P58512 204 aaPredicted RBP3.13□□□□□ -1.91
HCG18-243ENST00000602498 SNRPEP62304 92 aaKnown RBP3.13□□□□□ -1.91
HCG18-243ENST00000602498 CTAG1AP78358 180 aa3.13□□□□□ -1.91
HCG18-243ENST00000602498 SMIM29Q86T20 159 aa3.13□□□□□ -1.91
HCG18-243ENST00000602498 KRTAP19-1Q8IUB9 90 aa3.13□□□□□ -1.91
HCG18-243ENST00000602498 KRTAP9-2Q9BYQ4 174 aa3.13□□□□□ -1.91
HCG18-243ENST00000602498 CBY1Q9Y3M2 126 aa3.13□□□□□ -1.91
HCG18-243ENST00000602498 TRAV13-2A0A0B4J235 113 aa3.12□□□□□ -1.91
HCG18-243ENST00000602498 KRTAP9-6A0A140TA67 174 aa3.12□□□□□ -1.91
HCG18-243ENST00000602498 TEX49A0A1B0GTD5 131 aa3.12□□□□□ -1.91
HCG18-243ENST00000602498 A0A1B0GWB2 263 aa3.12□□□□□ -1.91
HCG18-243ENST00000602498 A4D1N5 150 aa3.12□□□□□ -1.91
HCG18-243ENST00000602498 HSBP1L1C9JCN9 74 aa3.12□□□□□ -1.91
HCG18-243ENST00000602498 SCGB1D1O95968 90 aa3.12□□□□□ -1.91
HCG18-243ENST00000602498 S100A6P06703 90 aa3.12□□□□□ -1.91
HCG18-243ENST00000602498 RPS29P62273 56 aaKnown RBP3.12□□□□□ -1.91
HCG18-243ENST00000602498 C21orf62-AS1Q17RA5 79 aa3.12□□□□□ -1.91
HCG18-243ENST00000602498 ASB16-AS1Q495Z4 193 aa3.12□□□□□ -1.91
HCG18-243ENST00000602498 SLC25A34Q6PIV7 304 aa3.12□□□□□ -1.91
HCG18-243ENST00000602498 SEC61BP60468 96 aaKnown RBP3.11□□□□□ -1.91
HCG18-243ENST00000602498 PCOTHQ58A44 107 aa3.11□□□□□ -1.91
HCG18-243ENST00000602498 COPS9Q8WXC6 57 aa3.11□□□□□ -1.91
HCG18-243ENST00000602498 KRTAP4-12Q9BQ66 201 aa3.11□□□□□ -1.91
HCG18-243ENST00000602498 LIMD2Q9BT23 127 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms