RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 TRAV23DV6A0A075B6W5 121 aa7.44□□□□□ -1.22
LIG1-212ENST00000596549 S100A12P80511 92 aa7.44□□□□□ -1.22
LIG1-212ENST00000596549 IGLV7-46A0A075B6I9 117 aa7.43□□□□□ -1.22
LIG1-212ENST00000596549 S100A7L2Q5SY68 101 aa7.43□□□□□ -1.22
LIG1-212ENST00000596549 GAGE2AQ6NT46 116 aa7.43□□□□□ -1.22
LIG1-212ENST00000596549 SPAG11AQ6PDA7 123 aa7.43□□□□□ -1.22
LIG1-212ENST00000596549 TTTY13Q9BZ97 58 aa7.43□□□□□ -1.22
LIG1-212ENST00000596549 C3orf79P0CE67 100 aa7.42□□□□□ -1.22
LIG1-212ENST00000596549 PET117Q6UWS5 81 aa7.42□□□□□ -1.22
LIG1-212ENST00000596549 MUC17Q685J3 4493 aa7.41□□□□□ -1.22
LIG1-212ENST00000596549 MOBPQ13875 183 aa7.41□□□□□ -1.22
LIG1-212ENST00000596549 LINC00308Q8TCZ7 52 aa7.41□□□□□ -1.22
LIG1-212ENST00000596549 IGLV9-49A0A0B4J1Y8 123 aa7.4□□□□□ -1.22
LIG1-212ENST00000596549 ZNF73O43830 326 aaPredicted RBP7.4□□□□□ -1.22
LIG1-212ENST00000596549 TIMM17BO60830 172 aa7.4□□□□□ -1.22
LIG1-212ENST00000596549 COA6Q5JTJ3 125 aaKnown RBP7.4□□□□□ -1.22
LIG1-212ENST00000596549 ZNF815PA8K554 130 aa7.39□□□□□ -1.23
LIG1-212ENST00000596549 CDIP1Q9H305 208 aa7.39□□□□□ -1.23
LIG1-212ENST00000596549 SPANXCQ9NY87 97 aa7.39□□□□□ -1.23
LIG1-212ENST00000596549 ST20-AS1Q8NBB2 130 aa7.38□□□□□ -1.23
LIG1-212ENST00000596549 SPINK1P00995 79 aa7.37□□□□□ -1.23
LIG1-212ENST00000596549 KRTDAPP60985 99 aa7.37□□□□□ -1.23
LIG1-212ENST00000596549 C4orf48Q5BLP8 95 aa7.37□□□□□ -1.23
LIG1-212ENST00000596549 FP248Q71RG6 208 aaPredicted RBP7.37□□□□□ -1.23
LIG1-212ENST00000596549 JOSD1Q15040 202 aaPredicted RBP7.36□□□□□ -1.23
LIG1-212ENST00000596549 KRTAP13-3Q3SY46 172 aa7.36□□□□□ -1.23
LIG1-212ENST00000596549 ANKRD39Q53RE8 183 aa7.35□□□□□ -1.23
LIG1-212ENST00000596549 Q8N377 158 aa7.35□□□□□ -1.23
LIG1-212ENST00000596549 RPS29P62273 56 aaKnown RBP7.34□□□□□ -1.23
LIG1-212ENST00000596549 SSBP3-AS1Q7Z2R9 100 aa7.34□□□□□ -1.23
LIG1-212ENST00000596549 SPANXDQ9BXN6 97 aa7.34□□□□□ -1.23
LIG1-212ENST00000596549 C9orf153Q5TBE3 101 aa7.33□□□□□ -1.24
LIG1-212ENST00000596549 ATOH7Q8N100 152 aa7.33□□□□□ -1.24
LIG1-212ENST00000596549 OR13C6PQ8NH95 151 aa7.33□□□□□ -1.24
LIG1-212ENST00000596549 A0A0U1RQV1 116 aa7.32□□□□□ -1.24
LIG1-212ENST00000596549 SPRR1BP22528 89 aa7.31□□□□□ -1.24
LIG1-212ENST00000596549 ELOF1P60002 83 aaKnown RBP7.31□□□□□ -1.24
LIG1-212ENST00000596549 LCE2AQ5TA79 106 aaPredicted RBP7.31□□□□□ -1.24
LIG1-212ENST00000596549 CBY1Q9Y3M2 126 aa7.31□□□□□ -1.24
LIG1-212ENST00000596549 C5orf52A6NGY3 159 aa7.3□□□□□ -1.24
LIG1-212ENST00000596549 C6orf99Q4VX62 202 aa7.3□□□□□ -1.24
LIG1-212ENST00000596549 SCGB1D4Q6XE38 83 aa7.3□□□□□ -1.24
LIG1-212ENST00000596549 C20orf202A1L168 122 aa7.29□□□□□ -1.24
LIG1-212ENST00000596549 HINT1P49773 126 aaPredicted RBP7.29□□□□□ -1.24
LIG1-212ENST00000596549 PCP2Q8IVA1 136 aa7.29□□□□□ -1.24
LIG1-212ENST00000596549 DHRS4-AS1Q9P1J3 65 aa7.28□□□□□ -1.24
LIG1-212ENST00000596549 FAT4Q6V0I7 4981 aa7.28□□□□□ -1.24
LIG1-212ENST00000596549 COX7BP24311 80 aa7.27□□□□□ -1.25
LIG1-212ENST00000596549 LINC00518Q8N0U6 118 aa7.27□□□□□ -1.25
LIG1-212ENST00000596549 SLC25A20O43772 301 aa7.26□□□□□ -1.25
LIG1-212ENST00000596549 IFITM1P13164 125 aa7.25□□□□□ -1.25
LIG1-212ENST00000596549 ASB16-AS1Q495Z4 193 aa7.25□□□□□ -1.25
LIG1-212ENST00000596549 HIST3H2BBQ8N257 126 aa7.25□□□□□ -1.25
LIG1-212ENST00000596549 MUSTN1Q8IVN3 82 aa7.24□□□□□ -1.25
LIG1-212ENST00000596549 KRTAP4-1Q9BYQ7 146 aa7.24□□□□□ -1.25
LIG1-212ENST00000596549 LINC01547P58512 204 aaPredicted RBP7.23□□□□□ -1.25
LIG1-212ENST00000596549 Q1RN00 199 aa7.23□□□□□ -1.25
LIG1-212ENST00000596549 Q6ZVH6 145 aa7.23□□□□□ -1.25
LIG1-212ENST00000596549 HIST1H2BLQ99880 126 aa7.23□□□□□ -1.25
LIG1-212ENST00000596549 TRBV7-6A0A0J9YX20 115 aa7.22□□□□□ -1.25
LIG1-212ENST00000596549 SLC25A34Q6PIV7 304 aa7.22□□□□□ -1.25
LIG1-212ENST00000596549 HRCT1Q6UXD1 115 aa7.22□□□□□ -1.25
LIG1-212ENST00000596549 SMIM29Q86T20 159 aa7.22□□□□□ -1.25
LIG1-212ENST00000596549 COPS9Q8WXC6 57 aa7.22□□□□□ -1.25
LIG1-212ENST00000596549 A0A1B0GWB2 263 aa7.21□□□□□ -1.26
LIG1-212ENST00000596549 A6NDN8 102 aa7.21□□□□□ -1.26
LIG1-212ENST00000596549 LAMTOR3Q9UHA4 124 aa7.21□□□□□ -1.26
LIG1-212ENST00000596549 IGLV5-48A0A075B6I7 105 aa7.2□□□□□ -1.26
LIG1-212ENST00000596549 AKR1D1P51857 326 aa7.2□□□□□ -1.26
LIG1-212ENST00000596549 XP32Q5T750 250 aa7.2□□□□□ -1.26
LIG1-212ENST00000596549 DEFB105AQ8NG35 78 aa7.2□□□□□ -1.26
LIG1-212ENST00000596549 TEX49A0A1B0GTD5 131 aa7.19□□□□□ -1.26
LIG1-212ENST00000596549 SNRPEP62304 92 aaKnown RBP7.19□□□□□ -1.26
LIG1-212ENST00000596549 TAL2Q16559 108 aa7.19□□□□□ -1.26
LIG1-212ENST00000596549 SMIM11BQ8TCY0 68 aa7.19□□□□□ -1.26
LIG1-212ENST00000596549 LIMD2Q9BT23 127 aa7.19□□□□□ -1.26
LIG1-212ENST00000596549 S100A2P29034 98 aa7.17□□□□□ -1.26
LIG1-212ENST00000596549 SEC61BP60468 96 aaKnown RBP7.17□□□□□ -1.26
LIG1-212ENST00000596549 TRAV13-2A0A0B4J235 113 aa7.16□□□□□ -1.26
LIG1-212ENST00000596549 A0A0G2JQZ4 141 aa7.16□□□□□ -1.26
LIG1-212ENST00000596549 H7C2G1 150 aa7.15□□□□□ -1.26
LIG1-212ENST00000596549 CD164Q04900 197 aa7.15□□□□□ -1.26
LIG1-212ENST00000596549 PRO1933Q9H354 126 aa7.15□□□□□ -1.26
LIG1-212ENST00000596549 A4D1N5 150 aa7.14□□□□□ -1.27
LIG1-212ENST00000596549 S100A1P23297 94 aa7.14□□□□□ -1.27
LIG1-212ENST00000596549 C9orf92A6NGG3 77 aa7.12□□□□□ -1.27
LIG1-212ENST00000596549 HSBP1L1C9JCN9 74 aa7.12□□□□□ -1.27
LIG1-212ENST00000596549 Q5XG85 94 aa7.12□□□□□ -1.27
LIG1-212ENST00000596549 NHP2Q9NX24 153 aaKnown RBP7.12□□□□□ -1.27
LIG1-212ENST00000596549 S100A6P06703 90 aa7.11□□□□□ -1.27
LIG1-212ENST00000596549 LINC00575Q6W349 94 aa7.1□□□□□ -1.27
LIG1-212ENST00000596549 C1orf195Q5TG92 126 aa7.09□□□□□ -1.27
LIG1-212ENST00000596549 C12orf57Q99622 126 aa7.09□□□□□ -1.27
LIG1-212ENST00000596549 Q6ZQY7 126 aa7.08□□□□□ -1.28
LIG1-212ENST00000596549 COX8AP10176 69 aa7.07□□□□□ -1.28
LIG1-212ENST00000596549 SCGB1D1O95968 90 aa7.06□□□□□ -1.28
LIG1-212ENST00000596549 KRTAP19-2Q3LHN2 52 aa7.06□□□□□ -1.28
LIG1-212ENST00000596549 PCOTHQ58A44 107 aa7.06□□□□□ -1.28
LIG1-212ENST00000596549 hADV29S1A0JD25 119 aa7.05□□□□□ -1.28
LIG1-212ENST00000596549 VAMP3Q15836 100 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms