RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 KCNQ1DNQ9H478 68 aa14.7□□□□□ -0.06
SRRM1-222ENST00000596378 UPK3BQ9BT76 320 aa14.69□□□□□ -0.06
SRRM1-222ENST00000596378 RMI2Q96E14 147 aa14.68□□□□□ -0.06
SRRM1-222ENST00000596378 FAM19A1Q7Z5A9 133 aa14.67□□□□□ -0.06
SRRM1-222ENST00000596378 KRTAP7-1Q8IUC3 87 aa14.67□□□□□ -0.06
SRRM1-222ENST00000596378 KRTAP1-5Q9BYS1 174 aa14.66□□□□□ -0.06
SRRM1-222ENST00000596378 TRBV7-4A0A0J9YYF1 115 aa14.65□□□□□ -0.06
SRRM1-222ENST00000596378 ATOX1O00244 68 aa14.65□□□□□ -0.06
SRRM1-222ENST00000596378 ATP5EP2Q5VTU8 51 aa14.64□□□□□ -0.07
SRRM1-222ENST00000596378 C3orf22Q8N5N4 141 aa14.64□□□□□ -0.07
SRRM1-222ENST00000596378 GHRHP01286 108 aa14.63□□□□□ -0.07
SRRM1-222ENST00000596378 PLA2G2DQ9UNK4 145 aa14.63□□□□□ -0.07
SRRM1-222ENST00000596378 Q6ZVQ6 151 aa14.62□□□□□ -0.07
SRRM1-222ENST00000596378 FAM19A5Q7Z5A7 132 aaPredicted RBP14.62□□□□□ -0.07
SRRM1-222ENST00000596378 DEFB105AQ8NG35 78 aa14.62□□□□□ -0.07
SRRM1-222ENST00000596378 PDE6GP18545 87 aa14.61□□□□□ -0.07
SRRM1-222ENST00000596378 UQCRQO14949 82 aa14.61□□□□□ -0.07
SRRM1-222ENST00000596378 C9orf153Q5TBE3 101 aa14.6□□□□□ -0.07
SRRM1-222ENST00000596378 IGLV1-50A0A075B6I6 118 aa14.6□□□□□ -0.07
SRRM1-222ENST00000596378 DNAH7Q8WXX0 4024 aa14.6□□□□□ -0.07
SRRM1-222ENST00000596378 COX7CP15954 63 aa14.59□□□□□ -0.07
SRRM1-222ENST00000596378 HAMPP81172 84 aa14.59□□□□□ -0.07
SRRM1-222ENST00000596378 MDFIQ99750 246 aa14.59□□□□□ -0.07
SRRM1-222ENST00000596378 CSMD3Q7Z407 3707 aa14.59□□□□□ -0.07
SRRM1-222ENST00000596378 LINC01547P58512 204 aaPredicted RBP14.58□□□□□ -0.08
SRRM1-222ENST00000596378 TENM2Q9NT68 2774 aa14.58□□□□□ -0.08
SRRM1-222ENST00000596378 IGLV5-37A0A075B6J1 123 aa14.58□□□□□ -0.08
SRRM1-222ENST00000596378 Q9BRP9 147 aa14.57□□□□□ -0.08
SRRM1-222ENST00000596378 KRTAP4-16G5E9R7 235 aaPredicted RBP14.57□□□□□ -0.08
SRRM1-222ENST00000596378 LOC107984640A0A0U1RRK4 108 aa14.56□□□□□ -0.08
SRRM1-222ENST00000596378 Q6ZRX8 168 aa14.56□□□□□ -0.08
SRRM1-222ENST00000596378 Q8N377 158 aa14.55□□□□□ -0.08
SRRM1-222ENST00000596378 PRYO14603 147 aa14.54□□□□□ -0.08
SRRM1-222ENST00000596378 MRPL55Q7Z7F7 128 aaKnown RBP14.54□□□□□ -0.08
SRRM1-222ENST00000596378 ETDCA0A1B0GVM5 59 aa14.53□□□□□ -0.08
SRRM1-222ENST00000596378 UBE2DNLQ8IWF7 75 aa14.53□□□□□ -0.08
SRRM1-222ENST00000596378 DYNC2H1Q8NCM8 4307 aaKnown RBP14.53□□□□□ -0.08
SRRM1-222ENST00000596378 SPRR1AP35321 89 aa14.52□□□□□ -0.08
SRRM1-222ENST00000596378 APLNQ9ULZ1 77 aa14.52□□□□□ -0.08
SRRM1-222ENST00000596378 SCXQ7RTU7 201 aa14.52□□□□□ -0.09
SRRM1-222ENST00000596378 ST20-AS1Q8NBB2 130 aa14.5□□□□□ -0.09
SRRM1-222ENST00000596378 PLECQ15149 4684 aaKnown RBP14.5□□□□□ -0.09
SRRM1-222ENST00000596378 PSCAO43653 123 aa14.5□□□□□ -0.09
SRRM1-222ENST00000596378 SERP2Q8N6R1 65 aa14.5□□□□□ -0.09
SRRM1-222ENST00000596378 DHRS4-AS1Q9P1J3 65 aa14.5□□□□□ -0.09
SRRM1-222ENST00000596378 IGKV2-24A0A0C4DH68 120 aa14.49□□□□□ -0.09
SRRM1-222ENST00000596378 A0A096LNI7 61 aa14.48□□□□□ -0.09
SRRM1-222ENST00000596378 CYSTM1Q9H1C7 97 aa14.48□□□□□ -0.09
SRRM1-222ENST00000596378 ERC2-IT1O76042 136 aa14.47□□□□□ -0.09
SRRM1-222ENST00000596378 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.47□□□□□ -0.09
SRRM1-222ENST00000596378 CRYGAP11844 174 aa14.44□□□□□ -0.1
SRRM1-222ENST00000596378 CXCL6P80162 114 aa14.44□□□□□ -0.1
SRRM1-222ENST00000596378 B9D2Q9BPU9 175 aa14.44□□□□□ -0.1
SRRM1-222ENST00000596378 C3orf84H3BNL1 204 aa14.43□□□□□ -0.1
SRRM1-222ENST00000596378 UBE2BP63146 152 aa14.43□□□□□ -0.1
SRRM1-222ENST00000596378 A0A1W2PNN7 141 aa14.42□□□□□ -0.1
SRRM1-222ENST00000596378 REG3GQ6UW15 175 aa14.42□□□□□ -0.1
SRRM1-222ENST00000596378 IGLV5-48A0A075B6I7 105 aa14.41□□□□□ -0.1
SRRM1-222ENST00000596378 CNBPP62633 177 aaKnown RBP14.41□□□□□ -0.1
SRRM1-222ENST00000596378 C16orf90A8MZG2 172 aa14.4□□□□□ -0.1
SRRM1-222ENST00000596378 CHTF8P0CG12 524 aa14.37□□□□□ -0.11
SRRM1-222ENST00000596378 Q8N9L7 120 aa14.36□□□□□ -0.11
SRRM1-222ENST00000596378 TNP2Q05952 138 aa14.35□□□□□ -0.11
SRRM1-222ENST00000596378 PRLHP81277 87 aa14.34□□□□□ -0.11
SRRM1-222ENST00000596378 NREPQ16612 68 aa14.34□□□□□ -0.11
SRRM1-222ENST00000596378 STARD9Q9P2P6 4700 aa14.34□□□□□ -0.11
SRRM1-222ENST00000596378 A0A1W2PNM2 257 aa14.33□□□□□ -0.11
SRRM1-222ENST00000596378 C1orf137Q5JT78 98 aa14.33□□□□□ -0.12
SRRM1-222ENST00000596378 SMIM20Q8N5G0 67 aa14.33□□□□□ -0.12
SRRM1-222ENST00000596378 PRKDCP78527 4128 aaKnown RBP14.32□□□□□ -0.12
SRRM1-222ENST00000596378 KRTAP11-1Q8IUC1 163 aa14.3□□□□□ -0.12
SRRM1-222ENST00000596378 NBDYA0A0U1RRE5 68 aa14.29□□□□□ -0.12
SRRM1-222ENST00000596378 PHF5AQ7RTV0 110 aaKnown RBP14.29□□□□□ -0.12
SRRM1-222ENST00000596378 FUSP35637 526 aaKnown RBP eCLIP14.28□□□□□ -0.12
SRRM1-222ENST00000596378 C14orf177Q52M58 125 aa14.28□□□□□ -0.12
SRRM1-222ENST00000596378 SMIM29Q86T20 159 aa14.28□□□□□ -0.12
SRRM1-222ENST00000596378 LRCOL1A6NCL2 159 aa14.27□□□□□ -0.12
SRRM1-222ENST00000596378 BPY2O14599 106 aa14.27□□□□□ -0.13
SRRM1-222ENST00000596378 A0A0G2JQZ4 141 aa14.26□□□□□ -0.13
SRRM1-222ENST00000596378 SRRM2Q9UQ35 2752 aaKnown RBP14.26□□□□□ -0.13
SRRM1-222ENST00000596378 HIGD2AQ9BW72 106 aa14.26□□□□□ -0.13
SRRM1-222ENST00000596378 IGKV4-1P06312 121 aa14.25□□□□□ -0.13
SRRM1-222ENST00000596378 C20orf197Q8N268 126 aa14.25□□□□□ -0.13
SRRM1-222ENST00000596378 NUPR2A6NF83 97 aa14.25□□□□□ -0.13
SRRM1-222ENST00000596378 Q8NBF4 154 aa14.24□□□□□ -0.13
SRRM1-222ENST00000596378 TRAV7A0A075B6U4 112 aa14.23□□□□□ -0.13
SRRM1-222ENST00000596378 VPS13DQ5THJ4 4388 aa14.22□□□□□ -0.13
SRRM1-222ENST00000596378 Q6ZRN7 208 aaPredicted RBP14.22□□□□□ -0.13
SRRM1-222ENST00000596378 C9orf163Q8N9P6 203 aa14.22□□□□□ -0.13
SRRM1-222ENST00000596378 LINC00476Q8WZB0 136 aa14.21□□□□□ -0.13
SRRM1-222ENST00000596378 BCE1O60756 84 aa14.2□□□□□ -0.14
SRRM1-222ENST00000596378 PANO1I0J062 215 aa14.2□□□□□ -0.14
SRRM1-222ENST00000596378 SPRR4Q96PI1 79 aa14.18□□□□□ -0.14
SRRM1-222ENST00000596378 MEGF8Q7Z7M0 2845 aa14.17□□□□□ -0.14
SRRM1-222ENST00000596378 F8WEM9 126 aa14.16□□□□□ -0.14
SRRM1-222ENST00000596378 TMEM258P61165 79 aa14.16□□□□□ -0.14
SRRM1-222ENST00000596378 EPM2AB3EWF7 344 aa14.15□□□□□ -0.14
SRRM1-222ENST00000596378 IGFL1Q6UW32 110 aa14.15□□□□□ -0.14
SRRM1-222ENST00000596378 A0A1B0GW54 56 aa14.14□□□□□ -0.15
SRRM1-222ENST00000596378 SNURFQ9Y675 71 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms