RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 DNHD1Q96M86 4753 aa12.72□□□□□ -0.37
MBD3-209ENST00000592012 IGLV5-37A0A075B6J1 123 aa12.72□□□□□ -0.37
MBD3-209ENST00000592012 GHRHP01286 108 aa12.72□□□□□ -0.37
MBD3-209ENST00000592012 KRTAP7-1Q8IUC3 87 aa12.72□□□□□ -0.37
MBD3-209ENST00000592012 Q6JHZ5 121 aa12.71□□□□□ -0.37
MBD3-209ENST00000592012 FAM236AA0A1B0GUQ0 79 aa12.7□□□□□ -0.38
MBD3-209ENST00000592012 FAM236BA0A1B0GV22 79 aa12.7□□□□□ -0.38
MBD3-209ENST00000592012 UBE2DNLQ8IWF7 75 aa12.7□□□□□ -0.38
MBD3-209ENST00000592012 LOC107984640A0A0U1RRK4 108 aa12.69□□□□□ -0.38
MBD3-209ENST00000592012 DSCR8Q96T75 97 aa12.69□□□□□ -0.38
MBD3-209ENST00000592012 IGLV1-50A0A075B6I6 118 aa12.68□□□□□ -0.38
MBD3-209ENST00000592012 IGKV3D-7A0A0C4DH55 119 aa12.68□□□□□ -0.38
MBD3-209ENST00000592012 RPL37AP8A6NKH3 93 aa12.68□□□□□ -0.38
MBD3-209ENST00000592012 PDE6GP18545 87 aa12.66□□□□□ -0.38
MBD3-209ENST00000592012 PRKDCP78527 4128 aaKnown RBP12.66□□□□□ -0.38
MBD3-209ENST00000592012 KRTAP4-16G5E9R7 235 aaPredicted RBP12.65□□□□□ -0.38
MBD3-209ENST00000592012 M0R2N4 97 aa12.65□□□□□ -0.38
MBD3-209ENST00000592012 TRBV7-4A0A0J9YYF1 115 aa12.64□□□□□ -0.39
MBD3-209ENST00000592012 PSCAO43653 123 aa12.64□□□□□ -0.39
MBD3-209ENST00000592012 SPRR1AP35321 89 aa12.64□□□□□ -0.39
MBD3-209ENST00000592012 PRYO14603 147 aa12.63□□□□□ -0.39
MBD3-209ENST00000592012 KRTAP21-3Q3LHN1 58 aa12.63□□□□□ -0.39
MBD3-209ENST00000592012 FAM19A5Q7Z5A7 132 aaPredicted RBP12.63□□□□□ -0.39
MBD3-209ENST00000592012 CNBPP62633 177 aaKnown RBP12.63□□□□□ -0.39
MBD3-209ENST00000592012 MRPL55Q7Z7F7 128 aaKnown RBP12.63□□□□□ -0.39
MBD3-209ENST00000592012 Q6ZRX8 168 aa12.62□□□□□ -0.39
MBD3-209ENST00000592012 UBL5Q9BZL1 73 aa12.62□□□□□ -0.39
MBD3-209ENST00000592012 B5MCH6 92 aa12.61□□□□□ -0.39
MBD3-209ENST00000592012 CCDC179H3BU77 68 aa12.6□□□□□ -0.39
MBD3-209ENST00000592012 HIST1H4AP62805 103 aaKnown RBP12.6□□□□□ -0.39
MBD3-209ENST00000592012 Q9BRP9 147 aa12.59□□□□□ -0.39
MBD3-209ENST00000592012 DHRS4-AS1Q9P1J3 65 aa12.59□□□□□ -0.39
MBD3-209ENST00000592012 STARD9Q9P2P6 4700 aa12.58□□□□□ -0.4
MBD3-209ENST00000592012 NUPR2A6NF83 97 aa12.58□□□□□ -0.4
MBD3-209ENST00000592012 ATP5EP2Q5VTU8 51 aa12.58□□□□□ -0.4
MBD3-209ENST00000592012 A0A096LNI7 61 aa12.57□□□□□ -0.4
MBD3-209ENST00000592012 ETDCA0A1B0GVM5 59 aa12.57□□□□□ -0.4
MBD3-209ENST00000592012 C16orf90A8MZG2 172 aa12.57□□□□□ -0.4
MBD3-209ENST00000592012 Q8N377 158 aa12.57□□□□□ -0.4
MBD3-209ENST00000592012 A0A087WVE0 104 aa12.56□□□□□ -0.4
MBD3-209ENST00000592012 LINC01547P58512 204 aaPredicted RBP12.56□□□□□ -0.4
MBD3-209ENST00000592012 DEFB105AQ8NG35 78 aa12.55□□□□□ -0.4
MBD3-209ENST00000592012 C14orf177Q52M58 125 aa12.54□□□□□ -0.4
MBD3-209ENST00000592012 VPS13DQ5THJ4 4388 aa12.54□□□□□ -0.4
MBD3-209ENST00000592012 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.54□□□□□ -0.4
MBD3-209ENST00000592012 IGKV2-24A0A0C4DH68 120 aa12.54□□□□□ -0.4
MBD3-209ENST00000592012 NBDYA0A0U1RRE5 68 aa12.54□□□□□ -0.4
MBD3-209ENST00000592012 Q6ZVQ6 151 aa12.53□□□□□ -0.4
MBD3-209ENST00000592012 A0A1W2PNN7 141 aa12.52□□□□□ -0.41
MBD3-209ENST00000592012 REG3GQ6UW15 175 aa12.51□□□□□ -0.41
MBD3-209ENST00000592012 LRCOL1A6NCL2 159 aa12.5□□□□□ -0.41
MBD3-209ENST00000592012 FAM19A1Q7Z5A9 133 aa12.49□□□□□ -0.41
MBD3-209ENST00000592012 ATOX1O00244 68 aa12.49□□□□□ -0.41
MBD3-209ENST00000592012 ERC2-IT1O76042 136 aa12.49□□□□□ -0.41
MBD3-209ENST00000592012 ST20-AS1Q8NBB2 130 aa12.49□□□□□ -0.41
MBD3-209ENST00000592012 IGLV5-48A0A075B6I7 105 aa12.48□□□□□ -0.41
MBD3-209ENST00000592012 MEGF8Q7Z7M0 2845 aa12.48□□□□□ -0.41
MBD3-209ENST00000592012 Q6ZRN7 208 aaPredicted RBP12.48□□□□□ -0.41
MBD3-209ENST00000592012 HAMPP81172 84 aa12.47□□□□□ -0.41
MBD3-209ENST00000592012 C3orf22Q8N5N4 141 aa12.47□□□□□ -0.41
MBD3-209ENST00000592012 UBE2BP63146 152 aa12.46□□□□□ -0.41
MBD3-209ENST00000592012 C9orf163Q8N9P6 203 aa12.45□□□□□ -0.42
MBD3-209ENST00000592012 CHTF8P0CG12 524 aa12.44□□□□□ -0.42
MBD3-209ENST00000592012 UQCRQO14949 82 aa12.42□□□□□ -0.42
MBD3-209ENST00000592012 CXCL6P80162 114 aa12.42□□□□□ -0.42
MBD3-209ENST00000592012 TNP2Q05952 138 aa12.42□□□□□ -0.42
MBD3-209ENST00000592012 KMT2AQ03164 3969 aa12.41□□□□□ -0.42
MBD3-209ENST00000592012 COX7CP15954 63 aa12.41□□□□□ -0.42
MBD3-209ENST00000592012 PHF5AQ7RTV0 110 aaKnown RBP12.38□□□□□ -0.43
MBD3-209ENST00000592012 PRLHP81277 87 aa12.37□□□□□ -0.43
MBD3-209ENST00000592012 KRTAP11-1Q8IUC1 163 aa12.37□□□□□ -0.43
MBD3-209ENST00000592012 SERP2Q8N6R1 65 aa12.36□□□□□ -0.43
MBD3-209ENST00000592012 DNAH2Q9P225 4427 aa12.35□□□□□ -0.43
MBD3-209ENST00000592012 C1orf137Q5JT78 98 aa12.35□□□□□ -0.43
MBD3-209ENST00000592012 SMIM29Q86T20 159 aa12.35□□□□□ -0.43
MBD3-209ENST00000592012 PKIGQ9Y2B9 76 aa12.35□□□□□ -0.43
MBD3-209ENST00000592012 HECTD4Q9Y4D8 3996 aa12.35□□□□□ -0.43
MBD3-209ENST00000592012 C3orf84H3BNL1 204 aa12.35□□□□□ -0.43
MBD3-209ENST00000592012 A0A1W2PNM2 257 aa12.34□□□□□ -0.43
MBD3-209ENST00000592012 C9orf153Q5TBE3 101 aa12.34□□□□□ -0.43
MBD3-209ENST00000592012 SCXQ7RTU7 201 aa12.34□□□□□ -0.43
MBD3-209ENST00000592012 SVIPQ8NHG7 77 aa12.34□□□□□ -0.43
MBD3-209ENST00000592012 SS18L2Q9UHA2 77 aa12.34□□□□□ -0.43
MBD3-209ENST00000592012 NREPQ16612 68 aa12.33□□□□□ -0.44
MBD3-209ENST00000592012 LINC00474Q9P2X8 69 aa12.33□□□□□ -0.44
MBD3-209ENST00000592012 PANO1I0J062 215 aa12.32□□□□□ -0.44
MBD3-209ENST00000592012 FUSP35637 526 aaKnown RBP eCLIP12.32□□□□□ -0.44
MBD3-209ENST00000592012 A0A1B0GW54 56 aa12.32□□□□□ -0.44
MBD3-209ENST00000592012 HIGD2AQ9BW72 106 aa12.32□□□□□ -0.44
MBD3-209ENST00000592012 SRRM2Q9UQ35 2752 aaKnown RBP12.3□□□□□ -0.44
MBD3-209ENST00000592012 CRYGAP11844 174 aa12.29□□□□□ -0.44
MBD3-209ENST00000592012 Q8NBF4 154 aa12.29□□□□□ -0.44
MBD3-209ENST00000592012 A0A087WTM6 91 aa12.28□□□□□ -0.44
MBD3-209ENST00000592012 H0Y9J4 135 aa12.28□□□□□ -0.44
MBD3-209ENST00000592012 SPRR4Q96PI1 79 aa12.28□□□□□ -0.44
MBD3-209ENST00000592012 EPM2AB3EWF7 344 aa12.27□□□□□ -0.44
MBD3-209ENST00000592012 Q6ZR54 194 aa12.27□□□□□ -0.44
MBD3-209ENST00000592012 LINC00476Q8WZB0 136 aa12.26□□□□□ -0.45
MBD3-209ENST00000592012 TGP01266 2768 aa12.25□□□□□ -0.45
MBD3-209ENST00000592012 DPH3Q96FX2 82 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms