RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 EIF4EBP3O60516 100 aaPredicted RBP11.31□□□□□ -0.6
TPM4-208ENST00000588410 TIMM17BO60830 172 aa11.31□□□□□ -0.6
TPM4-208ENST00000588410 GAGE2AQ6NT46 116 aa11.31□□□□□ -0.6
TPM4-208ENST00000588410 Q6ZRX8 168 aa11.31□□□□□ -0.6
TPM4-208ENST00000588410 CBY1Q9Y3M2 126 aa11.31□□□□□ -0.6
TPM4-208ENST00000588410 JOSD1Q15040 202 aaPredicted RBP11.3□□□□□ -0.6
TPM4-208ENST00000588410 LINC00308Q8TCZ7 52 aa11.3□□□□□ -0.6
TPM4-208ENST00000588410 LITAFQ99732 161 aa11.29□□□□□ -0.6
TPM4-208ENST00000588410 SPANXCQ9NY87 97 aa11.29□□□□□ -0.6
TPM4-208ENST00000588410 ZNF73O43830 326 aaPredicted RBP11.28□□□□□ -0.6
TPM4-208ENST00000588410 ERC2-IT1O76042 136 aa11.28□□□□□ -0.6
TPM4-208ENST00000588410 HINT1P49773 126 aaPredicted RBP11.28□□□□□ -0.6
TPM4-208ENST00000588410 LINC00483Q53H64 154 aa11.28□□□□□ -0.6
TPM4-208ENST00000588410 OR13C6PQ8NH95 151 aa11.28□□□□□ -0.6
TPM4-208ENST00000588410 Q8NBF4 154 aa11.27□□□□□ -0.61
TPM4-208ENST00000588410 Q9BRP9 147 aa11.27□□□□□ -0.61
TPM4-208ENST00000588410 TTTY13Q9BZ97 58 aa11.27□□□□□ -0.61
TPM4-208ENST00000588410 IGLV7-46A0A075B6I9 117 aa11.24□□□□□ -0.61
TPM4-208ENST00000588410 SCGB1D4Q6XE38 83 aa11.24□□□□□ -0.61
TPM4-208ENST00000588410 IGLV9-49A0A0B4J1Y8 123 aa11.23□□□□□ -0.61
TPM4-208ENST00000588410 AKR1D1P51857 326 aa11.23□□□□□ -0.61
TPM4-208ENST00000588410 SPANXDQ9BXN6 97 aa11.22□□□□□ -0.61
TPM4-208ENST00000588410 MOBPQ13875 183 aa11.21□□□□□ -0.61
TPM4-208ENST00000588410 LINC00518Q8N0U6 118 aa11.21□□□□□ -0.61
TPM4-208ENST00000588410 ATOH7Q8N100 152 aa11.21□□□□□ -0.61
TPM4-208ENST00000588410 ANKRD39Q53RE8 183 aa11.2□□□□□ -0.62
TPM4-208ENST00000588410 SPINK1P00995 79 aa11.19□□□□□ -0.62
TPM4-208ENST00000588410 SSBP3-AS1Q7Z2R9 100 aa11.19□□□□□ -0.62
TPM4-208ENST00000588410 COPS9Q8WXC6 57 aa11.19□□□□□ -0.62
TPM4-208ENST00000588410 CDIP1Q9H305 208 aa11.19□□□□□ -0.62
TPM4-208ENST00000588410 TPRXLQ17RH7 258 aa11.18□□□□□ -0.62
TPM4-208ENST00000588410 C5orf52A6NGY3 159 aa11.16□□□□□ -0.62
TPM4-208ENST00000588410 C9orf153Q5TBE3 101 aa11.16□□□□□ -0.62
TPM4-208ENST00000588410 DHRS4-AS1Q9P1J3 65 aa11.16□□□□□ -0.62
TPM4-208ENST00000588410 S100A1P23297 94 aa11.15□□□□□ -0.62
TPM4-208ENST00000588410 S100A2P29034 98 aa11.15□□□□□ -0.62
TPM4-208ENST00000588410 FP248Q71RG6 208 aaPredicted RBP11.15□□□□□ -0.62
TPM4-208ENST00000588410 ST20-AS1Q8NBB2 130 aa11.15□□□□□ -0.62
TPM4-208ENST00000588410 IFITM1P13164 125 aa11.14□□□□□ -0.63
TPM4-208ENST00000588410 SNRPEP62304 92 aaKnown RBP11.14□□□□□ -0.63
TPM4-208ENST00000588410 Q6ZVH6 145 aa11.14□□□□□ -0.63
TPM4-208ENST00000588410 COX7BP24311 80 aa11.13□□□□□ -0.63
TPM4-208ENST00000588410 PCP2Q8IVA1 136 aa11.13□□□□□ -0.63
TPM4-208ENST00000588410 C6orf99Q4VX62 202 aa11.12□□□□□ -0.63
TPM4-208ENST00000588410 SLC25A34Q6PIV7 304 aa11.11□□□□□ -0.63
TPM4-208ENST00000588410 HIST3H2BBQ8N257 126 aa11.11□□□□□ -0.63
TPM4-208ENST00000588410 A6NDN8 102 aa11.1□□□□□ -0.63
TPM4-208ENST00000588410 ELOF1P60002 83 aaKnown RBP11.1□□□□□ -0.63
TPM4-208ENST00000588410 RPS29P62273 56 aaKnown RBP11.1□□□□□ -0.63
TPM4-208ENST00000588410 MUSTN1Q8IVN3 82 aa11.1□□□□□ -0.63
TPM4-208ENST00000588410 HIST1H2BLQ99880 126 aa11.1□□□□□ -0.63
TPM4-208ENST00000588410 HSBP1L1C9JCN9 74 aa11.09□□□□□ -0.63
TPM4-208ENST00000588410 S100A6P06703 90 aa11.09□□□□□ -0.63
TPM4-208ENST00000588410 A0A0U1RQV1 116 aa11.07□□□□□ -0.64
TPM4-208ENST00000588410 SLC25A20O43772 301 aa11.06□□□□□ -0.64
TPM4-208ENST00000588410 SPRR1BP22528 89 aa11.06□□□□□ -0.64
TPM4-208ENST00000588410 LAMTOR3Q9UHA4 124 aa11.06□□□□□ -0.64
TPM4-208ENST00000588410 TRBV7-6A0A0J9YX20 115 aa11.05□□□□□ -0.64
TPM4-208ENST00000588410 TAL2Q16559 108 aa11.05□□□□□ -0.64
TPM4-208ENST00000588410 A0A1B0GWB2 263 aa11.04□□□□□ -0.64
TPM4-208ENST00000588410 Q8N377 158 aa11.04□□□□□ -0.64
TPM4-208ENST00000588410 MUC2Q02817 5179 aa11.03□□□□□ -0.64
TPM4-208ENST00000588410 TRAV13-2A0A0B4J235 113 aa11.03□□□□□ -0.64
TPM4-208ENST00000588410 DEFB105AQ8NG35 78 aa11.03□□□□□ -0.64
TPM4-208ENST00000588410 KRTAP13-3Q3SY46 172 aa11.01□□□□□ -0.65
TPM4-208ENST00000588410 TEX49A0A1B0GTD5 131 aa10.99□□□□□ -0.65
TPM4-208ENST00000588410 A4D1N5 150 aa10.99□□□□□ -0.65
TPM4-208ENST00000588410 SCGB1D1O95968 90 aa10.97□□□□□ -0.65
TPM4-208ENST00000588410 Q1RN00 199 aa10.97□□□□□ -0.65
TPM4-208ENST00000588410 HRCT1Q6UXD1 115 aa10.97□□□□□ -0.65
TPM4-208ENST00000588410 NHP2Q9NX24 153 aaKnown RBP10.97□□□□□ -0.65
TPM4-208ENST00000588410 SMIM11BQ8TCY0 68 aa10.96□□□□□ -0.65
TPM4-208ENST00000588410 LIMD2Q9BT23 127 aa10.96□□□□□ -0.65
TPM4-208ENST00000588410 MUC17Q685J3 4493 aa10.94□□□□□ -0.66
TPM4-208ENST00000588410 VAMP3Q15836 100 aa10.94□□□□□ -0.66
TPM4-208ENST00000588410 PRO1933Q9H354 126 aa10.94□□□□□ -0.66
TPM4-208ENST00000588410 IGLV5-48A0A075B6I7 105 aa10.9□□□□□ -0.66
TPM4-208ENST00000588410 LINC01547P58512 204 aaPredicted RBP10.89□□□□□ -0.67
TPM4-208ENST00000588410 CD164Q04900 197 aa10.89□□□□□ -0.67
TPM4-208ENST00000588410 HIST1H4GQ99525 98 aa10.89□□□□□ -0.67
TPM4-208ENST00000588410 H7C2G1 150 aa10.88□□□□□ -0.67
TPM4-208ENST00000588410 SMIM29Q86T20 159 aa10.88□□□□□ -0.67
TPM4-208ENST00000588410 SEC61BP60468 96 aaKnown RBP10.87□□□□□ -0.67
TPM4-208ENST00000588410 ASB16-AS1Q495Z4 193 aa10.87□□□□□ -0.67
TPM4-208ENST00000588410 COX8AP10176 69 aa10.86□□□□□ -0.67
TPM4-208ENST00000588410 LINC00575Q6W349 94 aa10.84□□□□□ -0.67
TPM4-208ENST00000588410 C12orf57Q99622 126 aa10.84□□□□□ -0.67
TPM4-208ENST00000588410 hADV29S1A0JD25 119 aa10.82□□□□□ -0.68
TPM4-208ENST00000588410 F8WEM9 126 aa10.82□□□□□ -0.68
TPM4-208ENST00000588410 DLEU1O43261 78 aa10.81□□□□□ -0.68
TPM4-208ENST00000588410 FAT4Q6V0I7 4981 aa10.8□□□□□ -0.68
TPM4-208ENST00000588410 XP32Q5T750 250 aa10.8□□□□□ -0.68
TPM4-208ENST00000588410 A0A0G2JQZ4 141 aa10.79□□□□□ -0.68
TPM4-208ENST00000588410 Q6ZQY7 126 aa10.79□□□□□ -0.68
TPM4-208ENST00000588410 C14orf144Q96I85 54 aa10.79□□□□□ -0.68
TPM4-208ENST00000588410 BVES-AS1Q5T3Y7 98 aa10.78□□□□□ -0.68
TPM4-208ENST00000588410 PAM16Q9Y3D7 125 aa10.78□□□□□ -0.68
TPM4-208ENST00000588410 SPATA45Q537H7 98 aa10.77□□□□□ -0.69
TPM4-208ENST00000588410 Q5XG85 94 aa10.77□□□□□ -0.69
TPM4-208ENST00000588410 VAMP8Q9BV40 100 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms