RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 RPL37AP8A6NKH3 93 aa12.65□□□□□ -0.38
TRIM47-204ENST00000587339 IGLV1-50A0A075B6I6 118 aa12.64□□□□□ -0.39
TRIM47-204ENST00000587339 COX7BP24311 80 aa12.64□□□□□ -0.39
TRIM47-204ENST00000587339 ELOF1P60002 83 aaKnown RBP12.64□□□□□ -0.39
TRIM47-204ENST00000587339 PPDPFLQ8WWR9 84 aa12.64□□□□□ -0.39
TRIM47-204ENST00000587339 SIGMAR1Q99720 223 aa12.64□□□□□ -0.39
TRIM47-204ENST00000587339 DNAH2Q9P225 4427 aa12.64□□□□□ -0.39
TRIM47-204ENST00000587339 hADV29S1A0JD25 119 aa12.64□□□□□ -0.39
TRIM47-204ENST00000587339 CHTF8P0CG12 524 aa12.64□□□□□ -0.39
TRIM47-204ENST00000587339 A0A1W2PNN7 141 aa12.63□□□□□ -0.39
TRIM47-204ENST00000587339 ORMDL1Q9P0S3 153 aa12.62□□□□□ -0.39
TRIM47-204ENST00000587339 LINC00474Q9P2X8 69 aa12.62□□□□□ -0.39
TRIM47-204ENST00000587339 TEX49A0A1B0GTD5 131 aa12.62□□□□□ -0.39
TRIM47-204ENST00000587339 PRYO14603 147 aa12.6□□□□□ -0.39
TRIM47-204ENST00000587339 RTL8CO15255 209 aa12.6□□□□□ -0.39
TRIM47-204ENST00000587339 LINC00528Q8N1L1 170 aa12.58□□□□□ -0.39
TRIM47-204ENST00000587339 FUSP35637 526 aaKnown RBP eCLIP12.58□□□□□ -0.4
TRIM47-204ENST00000587339 ALMS1Q8TCU4 4167 aa12.58□□□□□ -0.4
TRIM47-204ENST00000587339 TNP2Q05952 138 aa12.57□□□□□ -0.4
TRIM47-204ENST00000587339 SPRR1AP35321 89 aa12.55□□□□□ -0.4
TRIM47-204ENST00000587339 DPH3Q96FX2 82 aa12.55□□□□□ -0.4
TRIM47-204ENST00000587339 IGLV5-52A0A0A0MRZ9 124 aa12.54□□□□□ -0.4
TRIM47-204ENST00000587339 A0A1B0GV72 72 aa12.54□□□□□ -0.4
TRIM47-204ENST00000587339 TMEM256-PLSCR3K7ERE1 68 aa12.54□□□□□ -0.4
TRIM47-204ENST00000587339 Q6ZQY7 126 aa12.54□□□□□ -0.4
TRIM47-204ENST00000587339 KRTAP4-16G5E9R7 235 aaPredicted RBP12.54□□□□□ -0.4
TRIM47-204ENST00000587339 PANO1I0J062 215 aa12.54□□□□□ -0.4
TRIM47-204ENST00000587339 DNAH6Q9C0G6 4158 aa12.54□□□□□ -0.4
TRIM47-204ENST00000587339 ETDCA0A1B0GVM5 59 aa12.53□□□□□ -0.4
TRIM47-204ENST00000587339 REG3GQ6UW15 175 aa12.52□□□□□ -0.4
TRIM47-204ENST00000587339 Q6ZRX8 168 aa12.52□□□□□ -0.41
TRIM47-204ENST00000587339 SPACA4Q8TDM5 124 aa12.52□□□□□ -0.41
TRIM47-204ENST00000587339 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.52□□□□□ -0.41
TRIM47-204ENST00000587339 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.51□□□□□ -0.41
TRIM47-204ENST00000587339 PHF5AQ7RTV0 110 aaKnown RBP12.51□□□□□ -0.41
TRIM47-204ENST00000587339 B5MCH6 92 aa12.5□□□□□ -0.41
TRIM47-204ENST00000587339 INAFM2P0DMQ5 153 aa12.5□□□□□ -0.41
TRIM47-204ENST00000587339 UBE2BP63146 152 aa12.49□□□□□ -0.41
TRIM47-204ENST00000587339 DNAH17Q9UFH2 4485 aa12.49□□□□□ -0.41
TRIM47-204ENST00000587339 HYDINQ4G0P3 5121 aa12.48□□□□□ -0.41
TRIM47-204ENST00000587339 H3BQ85 93 aa12.47□□□□□ -0.41
TRIM47-204ENST00000587339 GHRHP01286 108 aa12.47□□□□□ -0.41
TRIM47-204ENST00000587339 DHRS4-AS1Q9P1J3 65 aa12.47□□□□□ -0.41
TRIM47-204ENST00000587339 OBSCN-AS1Q96MR7 158 aa12.45□□□□□ -0.42
TRIM47-204ENST00000587339 Q9BRP9 147 aa12.45□□□□□ -0.42
TRIM47-204ENST00000587339 HECTD4Q9Y4D8 3996 aa12.43□□□□□ -0.42
TRIM47-204ENST00000587339 EPM2AB3EWF7 344 aa12.43□□□□□ -0.42
TRIM47-204ENST00000587339 JMJD7-PLA2G4BH0Y9G9 81 aa12.43□□□□□ -0.42
TRIM47-204ENST00000587339 KRTAP10-2P60368 255 aa12.43□□□□□ -0.42
TRIM47-204ENST00000587339 KRTAP11-1Q8IUC1 163 aa12.43□□□□□ -0.42
TRIM47-204ENST00000587339 C14orf132Q9NPU4 83 aa12.42□□□□□ -0.42
TRIM47-204ENST00000587339 LCE6AA0A183 80 aa12.41□□□□□ -0.42
TRIM47-204ENST00000587339 FAM19A1Q7Z5A9 133 aa12.41□□□□□ -0.42
TRIM47-204ENST00000587339 LAMTOR3Q9UHA4 124 aa12.41□□□□□ -0.42
TRIM47-204ENST00000587339 FRAS1Q86XX4 4008 aa12.39□□□□□ -0.43
TRIM47-204ENST00000587339 CDIP1Q9H305 208 aa12.39□□□□□ -0.43
TRIM47-204ENST00000587339 PRLHP81277 87 aa12.39□□□□□ -0.43
TRIM47-204ENST00000587339 PLAC8Q9NZF1 115 aa12.38□□□□□ -0.43
TRIM47-204ENST00000587339 FAM240AA0A1B0GVK7 77 aa12.36□□□□□ -0.43
TRIM47-204ENST00000587339 DEFB105AQ8NG35 78 aa12.36□□□□□ -0.43
TRIM47-204ENST00000587339 SMCR5Q8TEV8 140 aa12.36□□□□□ -0.43
TRIM47-204ENST00000587339 ERC2-IT1O76042 136 aa12.35□□□□□ -0.43
TRIM47-204ENST00000587339 RBM3P98179 157 aaKnown RBP12.35□□□□□ -0.43
TRIM47-204ENST00000587339 GAGE2AQ6NT46 116 aa12.35□□□□□ -0.43
TRIM47-204ENST00000587339 NDUFV3P56181 108 aaKnown RBP12.33□□□□□ -0.44
TRIM47-204ENST00000587339 ST20-AS1Q8NBB2 130 aa12.33□□□□□ -0.44
TRIM47-204ENST00000587339 HIGD2AQ9BW72 106 aa12.33□□□□□ -0.44
TRIM47-204ENST00000587339 SACSQ9NZJ4 4579 aa12.33□□□□□ -0.44
TRIM47-204ENST00000587339 H0Y9J4 135 aa12.33□□□□□ -0.44
TRIM47-204ENST00000587339 Q8N377 158 aa12.33□□□□□ -0.44
TRIM47-204ENST00000587339 ACYP1P07311 99 aa12.32□□□□□ -0.44
TRIM47-204ENST00000587339 LINC01547P58512 204 aaPredicted RBP12.32□□□□□ -0.44
TRIM47-204ENST00000587339 BCE1O60756 84 aa12.31□□□□□ -0.44
TRIM47-204ENST00000587339 UBE2AP49459 152 aa12.31□□□□□ -0.44
TRIM47-204ENST00000587339 FAT2Q9NYQ8 4349 aa12.31□□□□□ -0.44
TRIM47-204ENST00000587339 IGLV5-48A0A075B6I7 105 aa12.31□□□□□ -0.44
TRIM47-204ENST00000587339 MT-ATP8P03928 68 aa12.3□□□□□ -0.44
TRIM47-204ENST00000587339 XGP55808 180 aa12.3□□□□□ -0.44
TRIM47-204ENST00000587339 DNAH11Q96DT5 4516 aa12.29□□□□□ -0.44
TRIM47-204ENST00000587339 DSCR8Q96T75 97 aa12.29□□□□□ -0.44
TRIM47-204ENST00000587339 CCKP06307 115 aa12.28□□□□□ -0.44
TRIM47-204ENST00000587339 SVIPQ8NHG7 77 aa12.28□□□□□ -0.44
TRIM47-204ENST00000587339 FAM30AQ9NZY2 134 aa12.28□□□□□ -0.44
TRIM47-204ENST00000587339 LOC110117498A0A087WWA1 95 aa12.26□□□□□ -0.45
TRIM47-204ENST00000587339 LINC00336Q6ZUF6 198 aa12.26□□□□□ -0.45
TRIM47-204ENST00000587339 KRTAP10-1P60331 282 aa12.25□□□□□ -0.45
TRIM47-204ENST00000587339 DNAH5Q8TE73 4624 aa12.25□□□□□ -0.45
TRIM47-204ENST00000587339 Q6ZQT0 140 aa12.25□□□□□ -0.45
TRIM47-204ENST00000587339 C3orf22Q8N5N4 141 aa12.25□□□□□ -0.45
TRIM47-204ENST00000587339 CIRBP-AS1Q8TBR5 109 aa12.25□□□□□ -0.45
TRIM47-204ENST00000587339 PSORS1C2Q9UIG4 136 aa12.25□□□□□ -0.45
TRIM47-204ENST00000587339 PKD1P98161 4303 aa12.24□□□□□ -0.45
TRIM47-204ENST00000587339 PDE6GP18545 87 aa12.24□□□□□ -0.45
TRIM47-204ENST00000587339 Q6ZSA8 131 aa12.24□□□□□ -0.45
TRIM47-204ENST00000587339 KRTAP13-1Q8IUC0 172 aa12.24□□□□□ -0.45
TRIM47-204ENST00000587339 TRBV7-4A0A0J9YYF1 115 aa12.23□□□□□ -0.45
TRIM47-204ENST00000587339 SCXQ7RTU7 201 aa12.21□□□□□ -0.46
TRIM47-204ENST00000587339 C1orf137Q5JT78 98 aa12.2□□□□□ -0.46
TRIM47-204ENST00000587339 DNAH8Q96JB1 4490 aa12.2□□□□□ -0.46
TRIM47-204ENST00000587339 LINC00846Q9NV44 126 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms