RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 ORMDL1Q9P0S3 153 aa9.38□□□□□ -0.91
MKS1-211ENST00000581761 PKIGQ9Y2B9 76 aa9.38□□□□□ -0.91
MKS1-211ENST00000581761 IGKV2-24A0A0C4DH68 120 aa9.37□□□□□ -0.91
MKS1-211ENST00000581761 TRBV7-6A0A0J9YX20 115 aa9.37□□□□□ -0.91
MKS1-211ENST00000581761 VPS25Q9BRG1 176 aa9.37□□□□□ -0.91
MKS1-211ENST00000581761 C22orf24Q9Y442 160 aa9.37□□□□□ -0.91
MKS1-211ENST00000581761 hADV29S1A0JD25 119 aa9.36□□□□□ -0.91
MKS1-211ENST00000581761 KRTAP7-1Q8IUC3 87 aa9.36□□□□□ -0.91
MKS1-211ENST00000581761 DNAH2Q9P225 4427 aa9.35□□□□□ -0.91
MKS1-211ENST00000581761 A0A087WTM6 91 aa9.35□□□□□ -0.91
MKS1-211ENST00000581761 ELOF1P60002 83 aaKnown RBP9.35□□□□□ -0.91
MKS1-211ENST00000581761 C9orf163Q8N9P6 203 aa9.35□□□□□ -0.91
MKS1-211ENST00000581761 KCNQ1DNQ9H478 68 aa9.35□□□□□ -0.91
MKS1-211ENST00000581761 PRYO14603 147 aa9.34□□□□□ -0.91
MKS1-211ENST00000581761 C1orf134Q5TEV5 83 aa9.34□□□□□ -0.91
MKS1-211ENST00000581761 MRPL55Q7Z7F7 128 aaKnown RBP9.34□□□□□ -0.91
MKS1-211ENST00000581761 RPL37AP8A6NKH3 93 aa9.33□□□□□ -0.92
MKS1-211ENST00000581761 IGLV1-50A0A075B6I6 118 aa9.32□□□□□ -0.92
MKS1-211ENST00000581761 A0A1W2PNN7 141 aa9.31□□□□□ -0.92
MKS1-211ENST00000581761 CHTF8P0CG12 524 aa9.31□□□□□ -0.92
MKS1-211ENST00000581761 LINC00528Q8N1L1 170 aa9.3□□□□□ -0.92
MKS1-211ENST00000581761 DNAH17Q9UFH2 4485 aa9.3□□□□□ -0.92
MKS1-211ENST00000581761 TMEM256-PLSCR3K7ERE1 68 aa9.29□□□□□ -0.92
MKS1-211ENST00000581761 INAFM2P0DMQ5 153 aa9.29□□□□□ -0.92
MKS1-211ENST00000581761 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.29□□□□□ -0.92
MKS1-211ENST00000581761 Q6ZQY7 126 aa9.29□□□□□ -0.92
MKS1-211ENST00000581761 FAT2Q9NYQ8 4349 aa9.28□□□□□ -0.92
MKS1-211ENST00000581761 ETDCA0A1B0GVM5 59 aa9.28□□□□□ -0.92
MKS1-211ENST00000581761 RTL8CO15255 209 aa9.28□□□□□ -0.92
MKS1-211ENST00000581761 SDIM1Q6ZPB5 146 aa9.28□□□□□ -0.92
MKS1-211ENST00000581761 H3BQ85 93 aa9.27□□□□□ -0.93
MKS1-211ENST00000581761 SPRR1AP35321 89 aa9.26□□□□□ -0.93
MKS1-211ENST00000581761 LINC00474Q9P2X8 69 aa9.26□□□□□ -0.93
MKS1-211ENST00000581761 PKHD1P08F94 4074 aa9.26□□□□□ -0.93
MKS1-211ENST00000581761 B5MCH6 92 aa9.25□□□□□ -0.93
MKS1-211ENST00000581761 REG3GQ6UW15 175 aa9.25□□□□□ -0.93
MKS1-211ENST00000581761 OBSCN-AS1Q96MR7 158 aa9.25□□□□□ -0.93
MKS1-211ENST00000581761 A0A1B0GV72 72 aa9.24□□□□□ -0.93
MKS1-211ENST00000581761 KRTAP4-16G5E9R7 235 aaPredicted RBP9.24□□□□□ -0.93
MKS1-211ENST00000581761 GHRHP01286 108 aa9.24□□□□□ -0.93
MKS1-211ENST00000581761 PHF5AQ7RTV0 110 aaKnown RBP9.24□□□□□ -0.93
MKS1-211ENST00000581761 CDIP1Q9H305 208 aa9.24□□□□□ -0.93
MKS1-211ENST00000581761 FUSP35637 526 aaKnown RBP eCLIP9.23□□□□□ -0.93
MKS1-211ENST00000581761 Q6ZRX8 168 aa9.23□□□□□ -0.93
MKS1-211ENST00000581761 LINC00336Q6ZUF6 198 aa9.23□□□□□ -0.93
MKS1-211ENST00000581761 C14orf132Q9NPU4 83 aa9.23□□□□□ -0.93
MKS1-211ENST00000581761 DHRS4-AS1Q9P1J3 65 aa9.23□□□□□ -0.93
MKS1-211ENST00000581761 PKD1P98161 4303 aa9.22□□□□□ -0.93
MKS1-211ENST00000581761 IGLV5-52A0A0A0MRZ9 124 aa9.22□□□□□ -0.93
MKS1-211ENST00000581761 JMJD7-PLA2G4BH0Y9G9 81 aa9.22□□□□□ -0.93
MKS1-211ENST00000581761 UBE2BP63146 152 aa9.22□□□□□ -0.93
MKS1-211ENST00000581761 DPH3Q96FX2 82 aa9.22□□□□□ -0.93
MKS1-211ENST00000581761 LAMTOR3Q9UHA4 124 aa9.22□□□□□ -0.93
MKS1-211ENST00000581761 HERC2O95714 4834 aa9.22□□□□□ -0.93
MKS1-211ENST00000581761 FAM240AA0A1B0GVK7 77 aa9.21□□□□□ -0.94
MKS1-211ENST00000581761 PANO1I0J062 215 aa9.21□□□□□ -0.94
MKS1-211ENST00000581761 TNP2Q05952 138 aa9.21□□□□□ -0.94
MKS1-211ENST00000581761 GAGE2AQ6NT46 116 aa9.2□□□□□ -0.94
MKS1-211ENST00000581761 SPACA4Q8TDM5 124 aa9.2□□□□□ -0.94
MKS1-211ENST00000581761 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.2□□□□□ -0.94
MKS1-211ENST00000581761 A0A1B0GVY2 172 aa9.19□□□□□ -0.94
MKS1-211ENST00000581761 Q9BRP9 147 aa9.19□□□□□ -0.94
MKS1-211ENST00000581761 ACYP1P07311 99 aa9.18□□□□□ -0.94
MKS1-211ENST00000581761 FAM19A1Q7Z5A9 133 aa9.18□□□□□ -0.94
MKS1-211ENST00000581761 SIGMAR1Q99720 223 aa9.18□□□□□ -0.94
MKS1-211ENST00000581761 DNAH11Q96DT5 4516 aa9.17□□□□□ -0.94
MKS1-211ENST00000581761 RBM3P98179 157 aaKnown RBP9.16□□□□□ -0.94
MKS1-211ENST00000581761 DEFB105AQ8NG35 78 aa9.16□□□□□ -0.94
MKS1-211ENST00000581761 KIAA1109Q2LD37 5005 aa9.15□□□□□ -0.94
MKS1-211ENST00000581761 NDUFV3P56181 108 aaKnown RBP9.15□□□□□ -0.94
MKS1-211ENST00000581761 C4orf48Q5BLP8 95 aa9.15□□□□□ -0.94
MKS1-211ENST00000581761 KRTAP11-1Q8IUC1 163 aa9.15□□□□□ -0.94
MKS1-211ENST00000581761 CCKP06307 115 aa9.14□□□□□ -0.95
MKS1-211ENST00000581761 XGP55808 180 aa9.14□□□□□ -0.95
MKS1-211ENST00000581761 PRLHP81277 87 aa9.14□□□□□ -0.95
MKS1-211ENST00000581761 EPM2AB3EWF7 344 aa9.13□□□□□ -0.95
MKS1-211ENST00000581761 ERC2-IT1O76042 136 aa9.13□□□□□ -0.95
MKS1-211ENST00000581761 MT-ATP8P03928 68 aa9.13□□□□□ -0.95
MKS1-211ENST00000581761 ST20-AS1Q8NBB2 130 aa9.13□□□□□ -0.95
MKS1-211ENST00000581761 SMCR5Q8TEV8 140 aa9.13□□□□□ -0.95
MKS1-211ENST00000581761 LINC01547P58512 204 aaPredicted RBP9.12□□□□□ -0.95
MKS1-211ENST00000581761 Q8N377 158 aa9.12□□□□□ -0.95
MKS1-211ENST00000581761 DSCR8Q96T75 97 aa9.12□□□□□ -0.95
MKS1-211ENST00000581761 LOC110117498A0A087WWA1 95 aa9.11□□□□□ -0.95
MKS1-211ENST00000581761 DYNC1H1Q14204 4646 aaKnown RBP9.11□□□□□ -0.95
MKS1-211ENST00000581761 UBE2AP49459 152 aa9.1□□□□□ -0.95
MKS1-211ENST00000581761 KRTAP10-2P60368 255 aa9.1□□□□□ -0.95
MKS1-211ENST00000581761 Q6ZQT0 140 aa9.1□□□□□ -0.95
MKS1-211ENST00000581761 HIGD2AQ9BW72 106 aa9.1□□□□□ -0.95
MKS1-211ENST00000581761 DNAH8Q96JB1 4490 aa9.09□□□□□ -0.95
MKS1-211ENST00000581761 IGLV5-48A0A075B6I7 105 aa9.09□□□□□ -0.95
MKS1-211ENST00000581761 BCE1O60756 84 aa9.09□□□□□ -0.95
MKS1-211ENST00000581761 PDE6GP18545 87 aa9.09□□□□□ -0.95
MKS1-211ENST00000581761 PLAC8Q9NZF1 115 aa9.09□□□□□ -0.95
MKS1-211ENST00000581761 PCLOQ9Y6V0 5065 aa9.07□□□□□ -0.96
MKS1-211ENST00000581761 H0Y9J4 135 aa9.07□□□□□ -0.96
MKS1-211ENST00000581761 RYR1P21817 5038 aa9.07□□□□□ -0.96
MKS1-211ENST00000581761 TRBV7-4A0A0J9YYF1 115 aa9.06□□□□□ -0.96
MKS1-211ENST00000581761 DNAH5Q8TE73 4624 aa9.06□□□□□ -0.96
MKS1-211ENST00000581761 LINC00643Q86TS7 51 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms