RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 DNAH7Q8WXX0 4024 aa9.05□□□□□ -0.96
VPS33B-208ENST00000574755 IGLV5-37A0A075B6J1 123 aa9.05□□□□□ -0.96
VPS33B-208ENST00000574755 FAM19A5Q7Z5A7 132 aaPredicted RBP9.05□□□□□ -0.96
VPS33B-208ENST00000574755 NDUFV3P56181 108 aaKnown RBP9.05□□□□□ -0.96
VPS33B-208ENST00000574755 ANAPC13Q9BS18 74 aa9.05□□□□□ -0.96
VPS33B-208ENST00000574755 IMUPQ9GZP8 106 aa9.05□□□□□ -0.96
VPS33B-208ENST00000574755 KRTAP7-1Q8IUC3 87 aa9.04□□□□□ -0.96
VPS33B-208ENST00000574755 IGLV1-50A0A075B6I6 118 aa9.04□□□□□ -0.96
VPS33B-208ENST00000574755 DSCR8Q96T75 97 aa9.04□□□□□ -0.96
VPS33B-208ENST00000574755 CNBPP62633 177 aaKnown RBP9.02□□□□□ -0.96
VPS33B-208ENST00000574755 Q6ZQT0 140 aa9.02□□□□□ -0.96
VPS33B-208ENST00000574755 MRPL55Q7Z7F7 128 aaKnown RBP9.02□□□□□ -0.96
VPS33B-208ENST00000574755 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.01□□□□□ -0.97
VPS33B-208ENST00000574755 LOC110117498A0A087WWA1 95 aa9.01□□□□□ -0.97
VPS33B-208ENST00000574755 PRYO14603 147 aa9.01□□□□□ -0.97
VPS33B-208ENST00000574755 PLECQ15149 4684 aaKnown RBP9.01□□□□□ -0.97
VPS33B-208ENST00000574755 PRKDCP78527 4128 aaKnown RBP9.01□□□□□ -0.97
VPS33B-208ENST00000574755 NBDYA0A0U1RRE5 68 aa9□□□□□ -0.97
VPS33B-208ENST00000574755 C14orf177Q52M58 125 aa9□□□□□ -0.97
VPS33B-208ENST00000574755 A0A096LNI7 61 aa9□□□□□ -0.97
VPS33B-208ENST00000574755 IGKV2-24A0A0C4DH68 120 aa9□□□□□ -0.97
VPS33B-208ENST00000574755 Q6ZRX8 168 aa9□□□□□ -0.97
VPS33B-208ENST00000574755 ETDCA0A1B0GVM5 59 aa8.99□□□□□ -0.97
VPS33B-208ENST00000574755 C16orf90A8MZG2 172 aa8.99□□□□□ -0.97
VPS33B-208ENST00000574755 MEGF8Q7Z7M0 2845 aa8.99□□□□□ -0.97
VPS33B-208ENST00000574755 Q6JHZ5 121 aa8.99□□□□□ -0.97
VPS33B-208ENST00000574755 IGKV3D-7A0A0C4DH55 119 aa8.98□□□□□ -0.97
VPS33B-208ENST00000574755 KRTAP4-16G5E9R7 235 aaPredicted RBP8.98□□□□□ -0.97
VPS33B-208ENST00000574755 PDE6GP18545 87 aa8.98□□□□□ -0.97
VPS33B-208ENST00000574755 SPRR1AP35321 89 aa8.98□□□□□ -0.97
VPS33B-208ENST00000574755 FAM236AA0A1B0GUQ0 79 aa8.98□□□□□ -0.97
VPS33B-208ENST00000574755 FAM236BA0A1B0GV22 79 aa8.98□□□□□ -0.97
VPS33B-208ENST00000574755 B5MCH6 92 aa8.98□□□□□ -0.97
VPS33B-208ENST00000574755 DHRS4-AS1Q9P1J3 65 aa8.97□□□□□ -0.97
VPS33B-208ENST00000574755 DEFB105AQ8NG35 78 aa8.97□□□□□ -0.97
VPS33B-208ENST00000574755 UBL5Q9BZL1 73 aa8.97□□□□□ -0.97
VPS33B-208ENST00000574755 M0R2N4 97 aa8.96□□□□□ -0.98
VPS33B-208ENST00000574755 Q9BRP9 147 aa8.96□□□□□ -0.98
VPS33B-208ENST00000574755 TRBV7-4A0A0J9YYF1 115 aa8.95□□□□□ -0.98
VPS33B-208ENST00000574755 STARD9Q9P2P6 4700 aa8.95□□□□□ -0.98
VPS33B-208ENST00000574755 LRCOL1A6NCL2 159 aa8.94□□□□□ -0.98
VPS33B-208ENST00000574755 REG3GQ6UW15 175 aa8.94□□□□□ -0.98
VPS33B-208ENST00000574755 A0A1W2PNN7 141 aa8.93□□□□□ -0.98
VPS33B-208ENST00000574755 Q8N377 158 aa8.93□□□□□ -0.98
VPS33B-208ENST00000574755 Q6ZRN7 208 aaPredicted RBP8.92□□□□□ -0.98
VPS33B-208ENST00000574755 UBE2BP63146 152 aa8.92□□□□□ -0.98
VPS33B-208ENST00000574755 CHTF8P0CG12 524 aa8.91□□□□□ -0.98
VPS33B-208ENST00000574755 ATP5EP2Q5VTU8 51 aa8.91□□□□□ -0.98
VPS33B-208ENST00000574755 C9orf163Q8N9P6 203 aa8.91□□□□□ -0.98
VPS33B-208ENST00000574755 LINC01547P58512 204 aaPredicted RBP8.9□□□□□ -0.98
VPS33B-208ENST00000574755 HIST1H4AP62805 103 aaKnown RBP8.9□□□□□ -0.99
VPS33B-208ENST00000574755 ST20-AS1Q8NBB2 130 aa8.9□□□□□ -0.99
VPS33B-208ENST00000574755 A0A087WVE0 104 aa8.89□□□□□ -0.99
VPS33B-208ENST00000574755 Q6ZVQ6 151 aa8.88□□□□□ -0.99
VPS33B-208ENST00000574755 C3orf22Q8N5N4 141 aa8.88□□□□□ -0.99
VPS33B-208ENST00000574755 ERC2-IT1O76042 136 aa8.88□□□□□ -0.99
VPS33B-208ENST00000574755 PKIGQ9Y2B9 76 aa8.87□□□□□ -0.99
VPS33B-208ENST00000574755 VPS13DQ5THJ4 4388 aa8.87□□□□□ -0.99
VPS33B-208ENST00000574755 IGLV5-48A0A075B6I7 105 aa8.86□□□□□ -0.99
VPS33B-208ENST00000574755 HAMPP81172 84 aa8.86□□□□□ -0.99
VPS33B-208ENST00000574755 FAM19A1Q7Z5A9 133 aa8.86□□□□□ -0.99
VPS33B-208ENST00000574755 CCDC179H3BU77 68 aa8.86□□□□□ -0.99
VPS33B-208ENST00000574755 PRLHP81277 87 aa8.85□□□□□ -0.99
VPS33B-208ENST00000574755 PHF5AQ7RTV0 110 aaKnown RBP8.85□□□□□ -0.99
VPS33B-208ENST00000574755 LINC00474Q9P2X8 69 aa8.84□□□□□ -0.99
VPS33B-208ENST00000574755 ATOX1O00244 68 aa8.83□□□□□ -1
VPS33B-208ENST00000574755 HIGD2AQ9BW72 106 aa8.82□□□□□ -1
VPS33B-208ENST00000574755 A0A087WTM6 91 aa8.81□□□□□ -1
VPS33B-208ENST00000574755 DPH3Q96FX2 82 aa8.81□□□□□ -1
VPS33B-208ENST00000574755 TNP2Q05952 138 aa8.81□□□□□ -1
VPS33B-208ENST00000574755 KRTAP11-1Q8IUC1 163 aa8.81□□□□□ -1
VPS33B-208ENST00000574755 PANO1I0J062 215 aa8.8□□□□□ -1
VPS33B-208ENST00000574755 C3orf84H3BNL1 204 aa8.8□□□□□ -1
VPS33B-208ENST00000574755 CXCL6P80162 114 aa8.8□□□□□ -1
VPS33B-208ENST00000574755 C1orf137Q5JT78 98 aa8.8□□□□□ -1
VPS33B-208ENST00000574755 Q6ZR54 194 aa8.8□□□□□ -1
VPS33B-208ENST00000574755 FUSP35637 526 aaKnown RBP eCLIP8.79□□□□□ -1
VPS33B-208ENST00000574755 KMT2AQ03164 3969 aa8.79□□□□□ -1
VPS33B-208ENST00000574755 TGP01266 2768 aa8.78□□□□□ -1
VPS33B-208ENST00000574755 FBN3Q75N90 2809 aa8.78□□□□□ -1
VPS33B-208ENST00000574755 SCXQ7RTU7 201 aa8.77□□□□□ -1.01
VPS33B-208ENST00000574755 F8WEM9 126 aa8.77□□□□□ -1.01
VPS33B-208ENST00000574755 NREPQ16612 68 aa8.77□□□□□ -1.01
VPS33B-208ENST00000574755 SMIM29Q86T20 159 aa8.77□□□□□ -1.01
VPS33B-208ENST00000574755 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.77□□□□□ -1.01
VPS33B-208ENST00000574755 EPM2AB3EWF7 344 aa8.76□□□□□ -1.01
VPS33B-208ENST00000574755 SPACA4Q8TDM5 124 aa8.76□□□□□ -1.01
VPS33B-208ENST00000574755 A0A1W2PNM2 257 aa8.76□□□□□ -1.01
VPS33B-208ENST00000574755 UQCRQO14949 82 aa8.76□□□□□ -1.01
VPS33B-208ENST00000574755 H0Y9J4 135 aa8.75□□□□□ -1.01
VPS33B-208ENST00000574755 RTL8CO15255 209 aa8.75□□□□□ -1.01
VPS33B-208ENST00000574755 LY6G6CO95867 125 aa8.75□□□□□ -1.01
VPS33B-208ENST00000574755 DNAH2Q9P225 4427 aa8.75□□□□□ -1.01
VPS33B-208ENST00000574755 COX7CP15954 63 aa8.75□□□□□ -1.01
VPS33B-208ENST00000574755 UBE2AP49459 152 aa8.75□□□□□ -1.01
VPS33B-208ENST00000574755 Q8NBF4 154 aa8.74□□□□□ -1.01
VPS33B-208ENST00000574755 A0A1B0GW54 56 aa8.73□□□□□ -1.01
VPS33B-208ENST00000574755 C1orf134Q5TEV5 83 aa8.73□□□□□ -1.01
VPS33B-208ENST00000574755 LINC00476Q8WZB0 136 aa8.73□□□□□ -1.01
VPS33B-208ENST00000574755 C9orf153Q5TBE3 101 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms