RNA–Protein interactions for RNA: ENST00000571409.1

CTDNEP1-206, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-206ENST00000571409 C4orf48Q5BLP8 95 aa17.4■□□□□ 0.38
CTDNEP1-206ENST00000571409 Q8NBF4 154 aa17.4■□□□□ 0.38
CTDNEP1-206ENST00000571409 IGLV7-46A0A075B6I9 117 aa17.38■□□□□ 0.37
CTDNEP1-206ENST00000571409 C3orf79P0CE67 100 aa17.38■□□□□ 0.37
CTDNEP1-206ENST00000571409 LITAFQ99732 161 aa17.38■□□□□ 0.37
CTDNEP1-206ENST00000571409 TPRXLQ17RH7 258 aa17.35■□□□□ 0.37
CTDNEP1-206ENST00000571409 LINC00308Q8TCZ7 52 aa17.35■□□□□ 0.37
CTDNEP1-206ENST00000571409 ZNF815PA8K554 130 aa17.34■□□□□ 0.37
CTDNEP1-206ENST00000571409 ZNF73O43830 326 aaPredicted RBP17.34■□□□□ 0.37
CTDNEP1-206ENST00000571409 TIMM17BO60830 172 aa17.34■□□□□ 0.37
CTDNEP1-206ENST00000571409 JOSD1Q15040 202 aaPredicted RBP17.33■□□□□ 0.36
CTDNEP1-206ENST00000571409 COA6Q5JTJ3 125 aaKnown RBP17.33■□□□□ 0.36
CTDNEP1-206ENST00000571409 IGLV9-49A0A0B4J1Y8 123 aa17.32■□□□□ 0.36
CTDNEP1-206ENST00000571409 KRTDAPP60985 99 aa17.32■□□□□ 0.36
CTDNEP1-206ENST00000571409 TTTY13Q9BZ97 58 aa17.32■□□□□ 0.36
CTDNEP1-206ENST00000571409 SPANXCQ9NY87 97 aa17.32■□□□□ 0.36
CTDNEP1-206ENST00000571409 MOBPQ13875 183 aa17.3■□□□□ 0.36
CTDNEP1-206ENST00000571409 CDIP1Q9H305 208 aa17.3■□□□□ 0.36
CTDNEP1-206ENST00000571409 CBY1Q9Y3M2 126 aa17.29■□□□□ 0.36
CTDNEP1-206ENST00000571409 MUC2Q02817 5179 aa17.27■□□□□ 0.36
CTDNEP1-206ENST00000571409 SPINK1P00995 79 aa17.27■□□□□ 0.36
CTDNEP1-206ENST00000571409 OR13C6PQ8NH95 151 aa17.27■□□□□ 0.36
CTDNEP1-206ENST00000571409 HINT1P49773 126 aaPredicted RBP17.25■□□□□ 0.35
CTDNEP1-206ENST00000571409 SSBP3-AS1Q7Z2R9 100 aa17.24■□□□□ 0.35
CTDNEP1-206ENST00000571409 FP248Q71RG6 208 aaPredicted RBP17.23■□□□□ 0.35
CTDNEP1-206ENST00000571409 C20orf202A1L168 122 aa17.22■□□□□ 0.35
CTDNEP1-206ENST00000571409 ST20-AS1Q8NBB2 130 aa17.21■□□□□ 0.35
CTDNEP1-206ENST00000571409 SPANXDQ9BXN6 97 aa17.2■□□□□ 0.34
CTDNEP1-206ENST00000571409 SCGB1D4Q6XE38 83 aa17.18■□□□□ 0.34
CTDNEP1-206ENST00000571409 ANKRD39Q53RE8 183 aa17.17■□□□□ 0.34
CTDNEP1-206ENST00000571409 LINC00518Q8N0U6 118 aa17.17■□□□□ 0.34
CTDNEP1-206ENST00000571409 C9orf153Q5TBE3 101 aa17.16■□□□□ 0.34
CTDNEP1-206ENST00000571409 ATOH7Q8N100 152 aa17.16■□□□□ 0.34
CTDNEP1-206ENST00000571409 A0A0U1RQV1 116 aa17.15■□□□□ 0.34
CTDNEP1-206ENST00000571409 C5orf52A6NGY3 159 aa17.15■□□□□ 0.34
CTDNEP1-206ENST00000571409 RPS29P62273 56 aaKnown RBP17.14■□□□□ 0.33
CTDNEP1-206ENST00000571409 DHRS4-AS1Q9P1J3 65 aa17.12■□□□□ 0.33
CTDNEP1-206ENST00000571409 Q8N377 158 aa17.1■□□□□ 0.33
CTDNEP1-206ENST00000571409 C6orf99Q4VX62 202 aa17.09■□□□□ 0.33
CTDNEP1-206ENST00000571409 COX7BP24311 80 aa17.08■□□□□ 0.32
CTDNEP1-206ENST00000571409 ELOF1P60002 83 aaKnown RBP17.08■□□□□ 0.32
CTDNEP1-206ENST00000571409 KRTAP13-3Q3SY46 172 aa17.08■□□□□ 0.32
CTDNEP1-206ENST00000571409 MUC17Q685J3 4493 aa17.07■□□□□ 0.32
CTDNEP1-206ENST00000571409 AKR1D1P51857 326 aa17.07■□□□□ 0.32
CTDNEP1-206ENST00000571409 COPS9Q8WXC6 57 aa17.07■□□□□ 0.32
CTDNEP1-206ENST00000571409 IFITM1P13164 125 aa17.06■□□□□ 0.32
CTDNEP1-206ENST00000571409 PCP2Q8IVA1 136 aa17.06■□□□□ 0.32
CTDNEP1-206ENST00000571409 SPRR1BP22528 89 aa17.05■□□□□ 0.32
CTDNEP1-206ENST00000571409 SLC25A20O43772 301 aa17.03■□□□□ 0.32
CTDNEP1-206ENST00000571409 Q6ZVH6 145 aa17.03■□□□□ 0.32
CTDNEP1-206ENST00000571409 SLC25A34Q6PIV7 304 aa17.02■□□□□ 0.32
CTDNEP1-206ENST00000571409 MUSTN1Q8IVN3 82 aa17.01■□□□□ 0.31
CTDNEP1-206ENST00000571409 A6NDN8 102 aa16.98■□□□□ 0.31
CTDNEP1-206ENST00000571409 TRBV7-6A0A0J9YX20 115 aa16.97■□□□□ 0.31
CTDNEP1-206ENST00000571409 SNRPEP62304 92 aaKnown RBP16.97■□□□□ 0.31
CTDNEP1-206ENST00000571409 HIST3H2BBQ8N257 126 aa16.97■□□□□ 0.31
CTDNEP1-206ENST00000571409 LAMTOR3Q9UHA4 124 aa16.97■□□□□ 0.31
CTDNEP1-206ENST00000571409 S100A2P29034 98 aa16.95■□□□□ 0.3
CTDNEP1-206ENST00000571409 HIST1H2BLQ99880 126 aa16.95■□□□□ 0.3
CTDNEP1-206ENST00000571409 TAL2Q16559 108 aa16.94■□□□□ 0.3
CTDNEP1-206ENST00000571409 DEFB105AQ8NG35 78 aa16.94■□□□□ 0.3
CTDNEP1-206ENST00000571409 A0A1B0GWB2 263 aa16.92■□□□□ 0.3
CTDNEP1-206ENST00000571409 Q1RN00 199 aa16.9■□□□□ 0.3
CTDNEP1-206ENST00000571409 HRCT1Q6UXD1 115 aa16.9■□□□□ 0.3
CTDNEP1-206ENST00000571409 S100A1P23297 94 aa16.89■□□□□ 0.29
CTDNEP1-206ENST00000571409 TRAV13-2A0A0B4J235 113 aa16.88■□□□□ 0.29
CTDNEP1-206ENST00000571409 TEX49A0A1B0GTD5 131 aa16.88■□□□□ 0.29
CTDNEP1-206ENST00000571409 ASB16-AS1Q495Z4 193 aa16.87■□□□□ 0.29
CTDNEP1-206ENST00000571409 LIMD2Q9BT23 127 aa16.86■□□□□ 0.29
CTDNEP1-206ENST00000571409 HSBP1L1C9JCN9 74 aa16.85■□□□□ 0.29
CTDNEP1-206ENST00000571409 FAT4Q6V0I7 4981 aa16.84■□□□□ 0.29
CTDNEP1-206ENST00000571409 S100A6P06703 90 aa16.83■□□□□ 0.28
CTDNEP1-206ENST00000571409 SMIM11BQ8TCY0 68 aa16.83■□□□□ 0.28
CTDNEP1-206ENST00000571409 A4D1N5 150 aa16.82■□□□□ 0.28
CTDNEP1-206ENST00000571409 LINC01547P58512 204 aaPredicted RBP16.81■□□□□ 0.28
CTDNEP1-206ENST00000571409 LCE2AQ5TA79 106 aaPredicted RBP16.81■□□□□ 0.28
CTDNEP1-206ENST00000571409 PRO1933Q9H354 126 aa16.81■□□□□ 0.28
CTDNEP1-206ENST00000571409 IGLV5-48A0A075B6I7 105 aa16.8■□□□□ 0.28
CTDNEP1-206ENST00000571409 SEC61BP60468 96 aaKnown RBP16.8■□□□□ 0.28
CTDNEP1-206ENST00000571409 SMIM29Q86T20 159 aa16.8■□□□□ 0.28
CTDNEP1-206ENST00000571409 CD164Q04900 197 aa16.77■□□□□ 0.28
CTDNEP1-206ENST00000571409 NHP2Q9NX24 153 aaKnown RBP16.77■□□□□ 0.28
CTDNEP1-206ENST00000571409 XP32Q5T750 250 aa16.75■□□□□ 0.27
CTDNEP1-206ENST00000571409 H7C2G1 150 aa16.72■□□□□ 0.27
CTDNEP1-206ENST00000571409 KRTAP4-1Q9BYQ7 146 aa16.7■□□□□ 0.26
CTDNEP1-206ENST00000571409 SCGB1D1O95968 90 aa16.69■□□□□ 0.26
CTDNEP1-206ENST00000571409 VAMP3Q15836 100 aa16.69■□□□□ 0.26
CTDNEP1-206ENST00000571409 A0A0G2JQZ4 141 aa16.67■□□□□ 0.26
CTDNEP1-206ENST00000571409 LINC00575Q6W349 94 aa16.64■□□□□ 0.25
CTDNEP1-206ENST00000571409 Q5XG85 94 aa16.62■□□□□ 0.25
CTDNEP1-206ENST00000571409 C9orf92A6NGG3 77 aa16.61■□□□□ 0.25
CTDNEP1-206ENST00000571409 HIST1H4GQ99525 98 aa16.61■□□□□ 0.25
CTDNEP1-206ENST00000571409 C12orf57Q99622 126 aa16.6■□□□□ 0.25
CTDNEP1-206ENST00000571409 COX8AP10176 69 aa16.59■□□□□ 0.25
CTDNEP1-206ENST00000571409 hADV29S1A0JD25 119 aa16.58■□□□□ 0.24
CTDNEP1-206ENST00000571409 F8WEM9 126 aa16.57■□□□□ 0.24
CTDNEP1-206ENST00000571409 Q6ZQY7 126 aa16.57■□□□□ 0.24
CTDNEP1-206ENST00000571409 C1orf195Q5TG92 126 aa16.55■□□□□ 0.24
CTDNEP1-206ENST00000571409 DLEU1O43261 78 aa16.51■□□□□ 0.23
CTDNEP1-206ENST00000571409 BVES-AS1Q5T3Y7 98 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms