RNA–Protein interactions for RNA: ENST00000567133.1

CNOT1-210, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5

Gene CNOT1, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-210ENST00000567133 KRTAP4-16G5E9R7 235 aaPredicted RBP6.39□□□□□ -1.39
CNOT1-210ENST00000567133 COA6Q5JTJ3 125 aaKnown RBP6.39□□□□□ -1.39
CNOT1-210ENST00000567133 GAGE2AQ6NT46 116 aa6.39□□□□□ -1.39
CNOT1-210ENST00000567133 ARL17AQ8IVW1 177 aa6.39□□□□□ -1.39
CNOT1-210ENST00000567133 OR13C6PQ8NH95 151 aa6.39□□□□□ -1.39
CNOT1-210ENST00000567133 LRP2P98164 4655 aa6.38□□□□□ -1.39
CNOT1-210ENST00000567133 TRAV23DV6A0A075B6W5 121 aa6.38□□□□□ -1.39
CNOT1-210ENST00000567133 ERC2-IT1O76042 136 aa6.38□□□□□ -1.39
CNOT1-210ENST00000567133 NDUFC2O95298 119 aa6.38□□□□□ -1.39
CNOT1-210ENST00000567133 LINC00308Q8TCZ7 52 aa6.38□□□□□ -1.39
CNOT1-210ENST00000567133 IGLV6-57P01721 117 aa6.37□□□□□ -1.39
CNOT1-210ENST00000567133 SCGB1D4Q6XE38 83 aa6.37□□□□□ -1.39
CNOT1-210ENST00000567133 LITAFQ99732 161 aa6.37□□□□□ -1.39
CNOT1-210ENST00000567133 IGLV9-49A0A0B4J1Y8 123 aa6.36□□□□□ -1.39
CNOT1-210ENST00000567133 ANKRD39Q53RE8 183 aa6.36□□□□□ -1.39
CNOT1-210ENST00000567133 Q9BRP9 147 aa6.36□□□□□ -1.39
CNOT1-210ENST00000567133 ZNF73O43830 326 aaPredicted RBP6.35□□□□□ -1.39
CNOT1-210ENST00000567133 TIMM17BO60830 172 aa6.35□□□□□ -1.39
CNOT1-210ENST00000567133 Q6ZRX8 168 aa6.35□□□□□ -1.39
CNOT1-210ENST00000567133 Q8NBF4 154 aa6.35□□□□□ -1.39
CNOT1-210ENST00000567133 TMA7Q9Y2S6 64 aaKnown RBP6.35□□□□□ -1.39
CNOT1-210ENST00000567133 UBR4Q5T4S7 5183 aa6.34□□□□□ -1.39
CNOT1-210ENST00000567133 S100A2P29034 98 aa6.34□□□□□ -1.39
CNOT1-210ENST00000567133 MOBPQ13875 183 aa6.34□□□□□ -1.39
CNOT1-210ENST00000567133 SPANXCQ9NY87 97 aa6.34□□□□□ -1.39
CNOT1-210ENST00000567133 PCP2Q8IVA1 136 aa6.33□□□□□ -1.4
CNOT1-210ENST00000567133 HINT1P49773 126 aaPredicted RBP6.32□□□□□ -1.4
CNOT1-210ENST00000567133 JOSD1Q15040 202 aaPredicted RBP6.32□□□□□ -1.4
CNOT1-210ENST00000567133 HIST3H2BBQ8N257 126 aa6.32□□□□□ -1.4
CNOT1-210ENST00000567133 ST20-AS1Q8NBB2 130 aa6.32□□□□□ -1.4
CNOT1-210ENST00000567133 LPAP08519 4548 aa6.32□□□□□ -1.4
CNOT1-210ENST00000567133 S100A6P06703 90 aa6.31□□□□□ -1.4
CNOT1-210ENST00000567133 LINC00483Q53H64 154 aa6.31□□□□□ -1.4
CNOT1-210ENST00000567133 C9orf153Q5TBE3 101 aa6.31□□□□□ -1.4
CNOT1-210ENST00000567133 SPANXDQ9BXN6 97 aa6.31□□□□□ -1.4
CNOT1-210ENST00000567133 IGLV7-46A0A075B6I9 117 aa6.3□□□□□ -1.4
CNOT1-210ENST00000567133 SPAG11AQ6PDA7 123 aa6.3□□□□□ -1.4
CNOT1-210ENST00000567133 HIST1H2BLQ99880 126 aa6.3□□□□□ -1.4
CNOT1-210ENST00000567133 CBY1Q9Y3M2 126 aa6.3□□□□□ -1.4
CNOT1-210ENST00000567133 A6NDN8 102 aa6.28□□□□□ -1.4
CNOT1-210ENST00000567133 A6NJY4 79 aa6.28□□□□□ -1.4
CNOT1-210ENST00000567133 HSBP1L1C9JCN9 74 aa6.28□□□□□ -1.4
CNOT1-210ENST00000567133 COX7BP24311 80 aa6.28□□□□□ -1.4
CNOT1-210ENST00000567133 C6orf99Q4VX62 202 aa6.28□□□□□ -1.4
CNOT1-210ENST00000567133 MUSTN1Q8IVN3 82 aa6.28□□□□□ -1.4
CNOT1-210ENST00000567133 LINC00518Q8N0U6 118 aa6.28□□□□□ -1.4
CNOT1-210ENST00000567133 DEFB105AQ8NG35 78 aa6.27□□□□□ -1.41
CNOT1-210ENST00000567133 COPS9Q8WXC6 57 aa6.27□□□□□ -1.41
CNOT1-210ENST00000567133 CDIP1Q9H305 208 aa6.27□□□□□ -1.41
CNOT1-210ENST00000567133 IFITM1P13164 125 aa6.26□□□□□ -1.41
CNOT1-210ENST00000567133 AKR1D1P51857 326 aa6.26□□□□□ -1.41
CNOT1-210ENST00000567133 SNRPEP62304 92 aaKnown RBP6.26□□□□□ -1.41
CNOT1-210ENST00000567133 SCGB1D1O95968 90 aa6.25□□□□□ -1.41
CNOT1-210ENST00000567133 SPINK1P00995 79 aa6.25□□□□□ -1.41
CNOT1-210ENST00000567133 DHRS4-AS1Q9P1J3 65 aa6.25□□□□□ -1.41
CNOT1-210ENST00000567133 LOC100996750A0A140TA64 210 aa6.24□□□□□ -1.41
CNOT1-210ENST00000567133 LOC105371267A0A1B0GV96 52 aa6.24□□□□□ -1.41
CNOT1-210ENST00000567133 ELOF1P60002 83 aaKnown RBP6.24□□□□□ -1.41
CNOT1-210ENST00000567133 HRCT1Q6UXD1 115 aa6.24□□□□□ -1.41
CNOT1-210ENST00000567133 SSBP3-AS1Q7Z2R9 100 aa6.24□□□□□ -1.41
CNOT1-210ENST00000567133 KRTAP4-6Q9BYQ5 205 aa6.24□□□□□ -1.41
CNOT1-210ENST00000567133 CTAG1AP78358 180 aa6.23□□□□□ -1.41
CNOT1-210ENST00000567133 TAL2Q16559 108 aa6.23□□□□□ -1.41
CNOT1-210ENST00000567133 Q1RN00 199 aa6.23□□□□□ -1.41
CNOT1-210ENST00000567133 Q6ZVH6 145 aa6.23□□□□□ -1.41
CNOT1-210ENST00000567133 TPRXLQ17RH7 258 aa6.22□□□□□ -1.41
CNOT1-210ENST00000567133 C5orf52A6NGY3 159 aa6.21□□□□□ -1.42
CNOT1-210ENST00000567133 SMIM11BQ8TCY0 68 aa6.21□□□□□ -1.42
CNOT1-210ENST00000567133 LAMTOR3Q9UHA4 124 aa6.21□□□□□ -1.42
CNOT1-210ENST00000567133 TRAV13-2A0A0B4J235 113 aa6.2□□□□□ -1.42
CNOT1-210ENST00000567133 A0A1B0GWB2 263 aa6.2□□□□□ -1.42
CNOT1-210ENST00000567133 SLC25A34Q6PIV7 304 aa6.2□□□□□ -1.42
CNOT1-210ENST00000567133 FP248Q71RG6 208 aaPredicted RBP6.2□□□□□ -1.42
CNOT1-210ENST00000567133 Q8N377 158 aa6.2□□□□□ -1.42
CNOT1-210ENST00000567133 C12orf57Q99622 126 aa6.2□□□□□ -1.42
CNOT1-210ENST00000567133 A4D1N5 150 aa6.18□□□□□ -1.42
CNOT1-210ENST00000567133 SLC25A20O43772 301 aa6.18□□□□□ -1.42
CNOT1-210ENST00000567133 SPRR1BP22528 89 aa6.18□□□□□ -1.42
CNOT1-210ENST00000567133 TRBV7-6A0A0J9YX20 115 aa6.17□□□□□ -1.42
CNOT1-210ENST00000567133 TEX49A0A1B0GTD5 131 aa6.17□□□□□ -1.42
CNOT1-210ENST00000567133 HIST1H4GQ99525 98 aa6.17□□□□□ -1.42
CNOT1-210ENST00000567133 A0A0G2JQZ4 141 aa6.16□□□□□ -1.42
CNOT1-210ENST00000567133 H7C2G1 150 aa6.16□□□□□ -1.42
CNOT1-210ENST00000567133 KRTAP13-3Q3SY46 172 aa6.16□□□□□ -1.42
CNOT1-210ENST00000567133 COX8AP10176 69 aa6.15□□□□□ -1.42
CNOT1-210ENST00000567133 RPS29P62273 56 aaKnown RBP6.15□□□□□ -1.42
CNOT1-210ENST00000567133 C14orf144Q96I85 54 aa6.15□□□□□ -1.42
CNOT1-210ENST00000567133 PAM16Q9Y3D7 125 aa6.15□□□□□ -1.42
CNOT1-210ENST00000567133 RNF213Q63HN8 5207 aa6.15□□□□□ -1.43
CNOT1-210ENST00000567133 VAMP3Q15836 100 aa6.14□□□□□ -1.43
CNOT1-210ENST00000567133 PRO1933Q9H354 126 aa6.14□□□□□ -1.43
CNOT1-210ENST00000567133 NHP2Q9NX24 153 aaKnown RBP6.14□□□□□ -1.43
CNOT1-210ENST00000567133 LINC01547P58512 204 aaPredicted RBP6.13□□□□□ -1.43
CNOT1-210ENST00000567133 SPATA45Q537H7 98 aa6.13□□□□□ -1.43
CNOT1-210ENST00000567133 SMIM29Q86T20 159 aa6.13□□□□□ -1.43
CNOT1-210ENST00000567133 LIMD2Q9BT23 127 aa6.13□□□□□ -1.43
CNOT1-210ENST00000567133 A0A0U1RQV1 116 aa6.12□□□□□ -1.43
CNOT1-210ENST00000567133 IGLV5-48A0A075B6I7 105 aa6.11□□□□□ -1.43
CNOT1-210ENST00000567133 SMIM6P0DI80 62 aa6.11□□□□□ -1.43
CNOT1-210ENST00000567133 LINC00575Q6W349 94 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms