RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 IGLV1-50A0A075B6I6 118 aa12.47□□□□□ -0.41
CLN6-205ENST00000564846 ELOF1P60002 83 aaKnown RBP12.47□□□□□ -0.41
CLN6-205ENST00000564846 LINC00474Q9P2X8 69 aa12.47□□□□□ -0.41
CLN6-205ENST00000564846 hADV29S1A0JD25 119 aa12.46□□□□□ -0.42
CLN6-205ENST00000564846 J3QR89 54 aa12.46□□□□□ -0.42
CLN6-205ENST00000564846 PRYO14603 147 aa12.45□□□□□ -0.42
CLN6-205ENST00000564846 ORMDL1Q9P0S3 153 aa12.44□□□□□ -0.42
CLN6-205ENST00000564846 A0A1W2PNN7 141 aa12.43□□□□□ -0.42
CLN6-205ENST00000564846 RPL37AP8A6NKH3 93 aa12.43□□□□□ -0.42
CLN6-205ENST00000564846 CHTF8P0CG12 524 aa12.43□□□□□ -0.42
CLN6-205ENST00000564846 RTL8CO15255 209 aa12.41□□□□□ -0.42
CLN6-205ENST00000564846 LINC00528Q8N1L1 170 aa12.41□□□□□ -0.42
CLN6-205ENST00000564846 TEX49A0A1B0GTD5 131 aa12.41□□□□□ -0.42
CLN6-205ENST00000564846 SPRR1AP35321 89 aa12.4□□□□□ -0.42
CLN6-205ENST00000564846 TMEM256-PLSCR3K7ERE1 68 aa12.38□□□□□ -0.43
CLN6-205ENST00000564846 TNP2Q05952 138 aa12.38□□□□□ -0.43
CLN6-205ENST00000564846 IGLV5-52A0A0A0MRZ9 124 aa12.36□□□□□ -0.43
CLN6-205ENST00000564846 KRTAP4-16G5E9R7 235 aaPredicted RBP12.36□□□□□ -0.43
CLN6-205ENST00000564846 INAFM2P0DMQ5 153 aa12.36□□□□□ -0.43
CLN6-205ENST00000564846 DNAH17Q9UFH2 4485 aa12.36□□□□□ -0.43
CLN6-205ENST00000564846 H3BQ85 93 aa12.35□□□□□ -0.43
CLN6-205ENST00000564846 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.35□□□□□ -0.43
CLN6-205ENST00000564846 SPACA4Q8TDM5 124 aa12.35□□□□□ -0.43
CLN6-205ENST00000564846 ETDCA0A1B0GVM5 59 aa12.35□□□□□ -0.43
CLN6-205ENST00000564846 REG3GQ6UW15 175 aa12.35□□□□□ -0.43
CLN6-205ENST00000564846 Q6ZQY7 126 aa12.35□□□□□ -0.43
CLN6-205ENST00000564846 GHRHP01286 108 aa12.34□□□□□ -0.43
CLN6-205ENST00000564846 Q6ZRX8 168 aa12.34□□□□□ -0.43
CLN6-205ENST00000564846 B5MCH6 92 aa12.33□□□□□ -0.44
CLN6-205ENST00000564846 PANO1I0J062 215 aa12.33□□□□□ -0.44
CLN6-205ENST00000564846 DPH3Q96FX2 82 aa12.33□□□□□ -0.44
CLN6-205ENST00000564846 HECTD4Q9Y4D8 3996 aa12.33□□□□□ -0.44
CLN6-205ENST00000564846 FUSP35637 526 aaKnown RBP eCLIP12.32□□□□□ -0.44
CLN6-205ENST00000564846 PHF5AQ7RTV0 110 aaKnown RBP12.32□□□□□ -0.44
CLN6-205ENST00000564846 DHRS4-AS1Q9P1J3 65 aa12.32□□□□□ -0.44
CLN6-205ENST00000564846 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.32□□□□□ -0.44
CLN6-205ENST00000564846 EPM2AB3EWF7 344 aa12.31□□□□□ -0.44
CLN6-205ENST00000564846 UBE2BP63146 152 aa12.3□□□□□ -0.44
CLN6-205ENST00000564846 OBSCN-AS1Q96MR7 158 aa12.3□□□□□ -0.44
CLN6-205ENST00000564846 HYDINQ4G0P3 5121 aa12.28□□□□□ -0.44
CLN6-205ENST00000564846 FRAS1Q86XX4 4008 aa12.28□□□□□ -0.44
CLN6-205ENST00000564846 JMJD7-PLA2G4BH0Y9G9 81 aa12.27□□□□□ -0.45
CLN6-205ENST00000564846 VPS25Q9BRG1 176 aa12.27□□□□□ -0.45
CLN6-205ENST00000564846 LCE6AA0A183 80 aa12.26□□□□□ -0.45
CLN6-205ENST00000564846 Q9BRP9 147 aa12.26□□□□□ -0.45
CLN6-205ENST00000564846 FAM19A1Q7Z5A9 133 aa12.23□□□□□ -0.45
CLN6-205ENST00000564846 KRTAP11-1Q8IUC1 163 aa12.23□□□□□ -0.45
CLN6-205ENST00000564846 PLAC8Q9NZF1 115 aa12.23□□□□□ -0.45
CLN6-205ENST00000564846 KRTAP10-2P60368 255 aa12.22□□□□□ -0.45
CLN6-205ENST00000564846 LAMTOR3Q9UHA4 124 aa12.22□□□□□ -0.45
CLN6-205ENST00000564846 FAM240AA0A1B0GVK7 77 aa12.21□□□□□ -0.45
CLN6-205ENST00000564846 C14orf132Q9NPU4 83 aa12.21□□□□□ -0.45
CLN6-205ENST00000564846 H0Y9J4 135 aa12.19□□□□□ -0.46
CLN6-205ENST00000564846 SMCR5Q8TEV8 140 aa12.18□□□□□ -0.46
CLN6-205ENST00000564846 SACSQ9NZJ4 4579 aa12.18□□□□□ -0.46
CLN6-205ENST00000564846 DNAH11Q96DT5 4516 aa12.18□□□□□ -0.46
CLN6-205ENST00000564846 ACYP1P07311 99 aa12.18□□□□□ -0.46
CLN6-205ENST00000564846 PRLHP81277 87 aa12.18□□□□□ -0.46
CLN6-205ENST00000564846 RBM3P98179 157 aaKnown RBP12.18□□□□□ -0.46
CLN6-205ENST00000564846 A0A1B0GV72 72 aa12.17□□□□□ -0.46
CLN6-205ENST00000564846 FAT2Q9NYQ8 4349 aa12.16□□□□□ -0.46
CLN6-205ENST00000564846 ERC2-IT1O76042 136 aa12.16□□□□□ -0.46
CLN6-205ENST00000564846 NDUFV3P56181 108 aaKnown RBP12.16□□□□□ -0.46
CLN6-205ENST00000564846 IGLV5-48A0A075B6I7 105 aa12.15□□□□□ -0.46
CLN6-205ENST00000564846 BCE1O60756 84 aa12.15□□□□□ -0.46
CLN6-205ENST00000564846 DEFB105AQ8NG35 78 aa12.15□□□□□ -0.46
CLN6-205ENST00000564846 CDIP1Q9H305 208 aa12.15□□□□□ -0.46
CLN6-205ENST00000564846 LINC01547P58512 204 aaPredicted RBP12.15□□□□□ -0.46
CLN6-205ENST00000564846 Q8N377 158 aa12.15□□□□□ -0.46
CLN6-205ENST00000564846 GAGE2AQ6NT46 116 aa12.14□□□□□ -0.47
CLN6-205ENST00000564846 UBE2AP49459 152 aa12.13□□□□□ -0.47
CLN6-205ENST00000564846 LINC00336Q6ZUF6 198 aa12.13□□□□□ -0.47
CLN6-205ENST00000564846 ST20-AS1Q8NBB2 130 aa12.13□□□□□ -0.47
CLN6-205ENST00000564846 HIGD2AQ9BW72 106 aa12.13□□□□□ -0.47
CLN6-205ENST00000564846 DNAH5Q8TE73 4624 aa12.12□□□□□ -0.47
CLN6-205ENST00000564846 CCKP06307 115 aa12.12□□□□□ -0.47
CLN6-205ENST00000564846 DSCR8Q96T75 97 aa12.12□□□□□ -0.47
CLN6-205ENST00000564846 LOC110117498A0A087WWA1 95 aa12.11□□□□□ -0.47
CLN6-205ENST00000564846 PDE6GP18545 87 aa12.1□□□□□ -0.47
CLN6-205ENST00000564846 Q6ZSA8 131 aa12.09□□□□□ -0.47
CLN6-205ENST00000564846 KRTAP13-1Q8IUC0 172 aa12.09□□□□□ -0.47
CLN6-205ENST00000564846 PKD1P98161 4303 aa12.09□□□□□ -0.47
CLN6-205ENST00000564846 Q6ZQT0 140 aa12.07□□□□□ -0.48
CLN6-205ENST00000564846 FAM30AQ9NZY2 134 aa12.07□□□□□ -0.48
CLN6-205ENST00000564846 KRTAP10-1P60331 282 aa12.07□□□□□ -0.48
CLN6-205ENST00000564846 PSORS1C2Q9UIG4 136 aa12.07□□□□□ -0.48
CLN6-205ENST00000564846 TRBV7-4A0A0J9YYF1 115 aa12.06□□□□□ -0.48
CLN6-205ENST00000564846 SIGMAR1Q99720 223 aa12.05□□□□□ -0.48
CLN6-205ENST00000564846 DNAH8Q96JB1 4490 aa12.05□□□□□ -0.48
CLN6-205ENST00000564846 C21orf62-AS1Q17RA5 79 aa12.05□□□□□ -0.48
CLN6-205ENST00000564846 CIRBP-AS1Q8TBR5 109 aa12.05□□□□□ -0.48
CLN6-205ENST00000564846 XGP55808 180 aa12.02□□□□□ -0.48
CLN6-205ENST00000564846 C3orf22Q8N5N4 141 aa12.02□□□□□ -0.48
CLN6-205ENST00000564846 SCXQ7RTU7 201 aa12.02□□□□□ -0.49
CLN6-205ENST00000564846 C1orf137Q5JT78 98 aa12.01□□□□□ -0.49
CLN6-205ENST00000564846 SMIM29Q86T20 159 aa12□□□□□ -0.49
CLN6-205ENST00000564846 SPRR1BP22528 89 aa12□□□□□ -0.49
CLN6-205ENST00000564846 LINC00846Q9NV44 126 aa11.99□□□□□ -0.49
CLN6-205ENST00000564846 RYR2Q92736 4967 aa11.97□□□□□ -0.49
CLN6-205ENST00000564846 F8WEM9 126 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms