RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 CNBPP62633 177 aaKnown RBP12.25□□□□□ -0.45
SMPD3-203ENST00000563226 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.25□□□□□ -0.45
SMPD3-203ENST00000563226 IGLV1-50A0A075B6I6 118 aa12.24□□□□□ -0.45
SMPD3-203ENST00000563226 CCKP06307 115 aa12.24□□□□□ -0.45
SMPD3-203ENST00000563226 LAMTOR3Q9UHA4 124 aa12.24□□□□□ -0.45
SMPD3-203ENST00000563226 A0A096LNI7 61 aa12.23□□□□□ -0.45
SMPD3-203ENST00000563226 LINC00846Q9NV44 126 aa12.23□□□□□ -0.45
SMPD3-203ENST00000563226 LINC00643Q86TS7 51 aa12.22□□□□□ -0.45
SMPD3-203ENST00000563226 IGKV2-24A0A0C4DH68 120 aa12.21□□□□□ -0.45
SMPD3-203ENST00000563226 MRPL55Q7Z7F7 128 aaKnown RBP12.21□□□□□ -0.45
SMPD3-203ENST00000563226 LRCOL1A6NCL2 159 aa12.2□□□□□ -0.46
SMPD3-203ENST00000563226 Q6Q795 121 aa12.2□□□□□ -0.46
SMPD3-203ENST00000563226 Q6ZRN7 208 aaPredicted RBP12.2□□□□□ -0.46
SMPD3-203ENST00000563226 KRTAP4-16G5E9R7 235 aaPredicted RBP12.2□□□□□ -0.46
SMPD3-203ENST00000563226 RBM3P98179 157 aaKnown RBP12.2□□□□□ -0.46
SMPD3-203ENST00000563226 TRBV7-7A0A0K0K1E9 115 aa12.19□□□□□ -0.46
SMPD3-203ENST00000563226 PRYO14603 147 aa12.19□□□□□ -0.46
SMPD3-203ENST00000563226 C16orf90A8MZG2 172 aa12.18□□□□□ -0.46
SMPD3-203ENST00000563226 M0R2N4 97 aa12.18□□□□□ -0.46
SMPD3-203ENST00000563226 SPRR1AP35321 89 aa12.18□□□□□ -0.46
SMPD3-203ENST00000563226 C14orf177Q52M58 125 aa12.18□□□□□ -0.46
SMPD3-203ENST00000563226 H3BQ85 93 aa12.17□□□□□ -0.46
SMPD3-203ENST00000563226 Q6ZQT0 140 aa12.17□□□□□ -0.46
SMPD3-203ENST00000563226 A0A1W2PNN7 141 aa12.17□□□□□ -0.46
SMPD3-203ENST00000563226 B5MCH6 92 aa12.17□□□□□ -0.46
SMPD3-203ENST00000563226 Q6ZRX8 168 aa12.16□□□□□ -0.46
SMPD3-203ENST00000563226 Q9BRP9 147 aa12.16□□□□□ -0.46
SMPD3-203ENST00000563226 DNAH2Q9P225 4427 aa12.16□□□□□ -0.46
SMPD3-203ENST00000563226 KMT2AQ03164 3969 aa12.16□□□□□ -0.46
SMPD3-203ENST00000563226 LOC110117498A0A087WWA1 95 aa12.15□□□□□ -0.46
SMPD3-203ENST00000563226 CHTF8P0CG12 524 aa12.15□□□□□ -0.46
SMPD3-203ENST00000563226 ETDCA0A1B0GVM5 59 aa12.14□□□□□ -0.47
SMPD3-203ENST00000563226 NDUFV3P56181 108 aaKnown RBP12.13□□□□□ -0.47
SMPD3-203ENST00000563226 DSCR8Q96T75 97 aa12.12□□□□□ -0.47
SMPD3-203ENST00000563226 GHRHP01286 108 aa12.11□□□□□ -0.47
SMPD3-203ENST00000563226 C9orf163Q8N9P6 203 aa12.1□□□□□ -0.47
SMPD3-203ENST00000563226 DEFB105AQ8NG35 78 aa12.1□□□□□ -0.47
SMPD3-203ENST00000563226 LINC01547P58512 204 aaPredicted RBP12.1□□□□□ -0.47
SMPD3-203ENST00000563226 DHRS4-AS1Q9P1J3 65 aa12.1□□□□□ -0.47
SMPD3-203ENST00000563226 IGKV3D-7A0A0C4DH55 119 aa12.09□□□□□ -0.47
SMPD3-203ENST00000563226 TRBV7-4A0A0J9YYF1 115 aa12.09□□□□□ -0.47
SMPD3-203ENST00000563226 REG3GQ6UW15 175 aa12.09□□□□□ -0.47
SMPD3-203ENST00000563226 Q8N377 158 aa12.09□□□□□ -0.47
SMPD3-203ENST00000563226 FBN3Q75N90 2809 aa12.09□□□□□ -0.47
SMPD3-203ENST00000563226 IMUPQ9GZP8 106 aa12.09□□□□□ -0.47
SMPD3-203ENST00000563226 ERC2-IT1O76042 136 aa12.07□□□□□ -0.48
SMPD3-203ENST00000563226 Q6JHZ5 121 aa12.07□□□□□ -0.48
SMPD3-203ENST00000563226 ST20-AS1Q8NBB2 130 aa12.07□□□□□ -0.48
SMPD3-203ENST00000563226 DNAH17Q9UFH2 4485 aa12.07□□□□□ -0.48
SMPD3-203ENST00000563226 ANAPC13Q9BS18 74 aa12.06□□□□□ -0.48
SMPD3-203ENST00000563226 KRTAP11-1Q8IUC1 163 aa12.05□□□□□ -0.48
SMPD3-203ENST00000563226 HECTD4Q9Y4D8 3996 aa12.05□□□□□ -0.48
SMPD3-203ENST00000563226 PANO1I0J062 215 aa12.04□□□□□ -0.48
SMPD3-203ENST00000563226 PHF5AQ7RTV0 110 aaKnown RBP12.04□□□□□ -0.48
SMPD3-203ENST00000563226 C3orf22Q8N5N4 141 aa12.04□□□□□ -0.48
SMPD3-203ENST00000563226 PDE6GP18545 87 aa12.04□□□□□ -0.48
SMPD3-203ENST00000563226 UBE2BP63146 152 aa12.04□□□□□ -0.48
SMPD3-203ENST00000563226 FAM236AA0A1B0GUQ0 79 aa12.03□□□□□ -0.48
SMPD3-203ENST00000563226 FAM236BA0A1B0GV22 79 aa12.03□□□□□ -0.48
SMPD3-203ENST00000563226 Q6ZR54 194 aa12.03□□□□□ -0.48
SMPD3-203ENST00000563226 FUSP35637 526 aaKnown RBP eCLIP12.02□□□□□ -0.48
SMPD3-203ENST00000563226 A0A087WTM6 91 aa12.01□□□□□ -0.49
SMPD3-203ENST00000563226 PRLHP81277 87 aa12.01□□□□□ -0.49
SMPD3-203ENST00000563226 UBL5Q9BZL1 73 aa12□□□□□ -0.49
SMPD3-203ENST00000563226 IGLV5-48A0A075B6I7 105 aa11.99□□□□□ -0.49
SMPD3-203ENST00000563226 FAM19A1Q7Z5A9 133 aa11.99□□□□□ -0.49
SMPD3-203ENST00000563226 TGP01266 2768 aa11.99□□□□□ -0.49
SMPD3-203ENST00000563226 DNAH6Q9C0G6 4158 aa11.98□□□□□ -0.49
SMPD3-203ENST00000563226 A0A087WVE0 104 aa11.97□□□□□ -0.49
SMPD3-203ENST00000563226 KRTAP21-3Q3LHN1 58 aa11.97□□□□□ -0.49
SMPD3-203ENST00000563226 Q6ZVQ6 151 aa11.96□□□□□ -0.49
SMPD3-203ENST00000563226 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.96□□□□□ -0.5
SMPD3-203ENST00000563226 TNP2Q05952 138 aa11.95□□□□□ -0.5
SMPD3-203ENST00000563226 PKIGQ9Y2B9 76 aa11.95□□□□□ -0.5
SMPD3-203ENST00000563226 ATP5EP2Q5VTU8 51 aa11.93□□□□□ -0.5
SMPD3-203ENST00000563226 LINC00474Q9P2X8 69 aa11.93□□□□□ -0.5
SMPD3-203ENST00000563226 LY6G6CO95867 125 aa11.93□□□□□ -0.5
SMPD3-203ENST00000563226 HIGD2AQ9BW72 106 aa11.93□□□□□ -0.5
SMPD3-203ENST00000563226 SPACA4Q8TDM5 124 aa11.92□□□□□ -0.5
SMPD3-203ENST00000563226 HIST1H4AP62805 103 aaKnown RBP11.91□□□□□ -0.5
SMPD3-203ENST00000563226 SMIM29Q86T20 159 aa11.91□□□□□ -0.5
SMPD3-203ENST00000563226 RTL8CO15255 209 aa11.9□□□□□ -0.5
SMPD3-203ENST00000563226 DPH3Q96FX2 82 aa11.9□□□□□ -0.5
SMPD3-203ENST00000563226 DNAH8Q96JB1 4490 aa11.9□□□□□ -0.5
SMPD3-203ENST00000563226 HAMPP81172 84 aa11.89□□□□□ -0.51
SMPD3-203ENST00000563226 C1orf134Q5TEV5 83 aa11.89□□□□□ -0.51
SMPD3-203ENST00000563226 ALMS1Q8TCU4 4167 aa11.89□□□□□ -0.51
SMPD3-203ENST00000563226 EPM2AB3EWF7 344 aa11.88□□□□□ -0.51
SMPD3-203ENST00000563226 CCDC179H3BU77 68 aa11.88□□□□□ -0.51
SMPD3-203ENST00000563226 C1orf137Q5JT78 98 aa11.87□□□□□ -0.51
SMPD3-203ENST00000563226 FRAS1Q86XX4 4008 aa11.87□□□□□ -0.51
SMPD3-203ENST00000563226 C3orf84H3BNL1 204 aa11.87□□□□□ -0.51
SMPD3-203ENST00000563226 SRRM2Q9UQ35 2752 aaKnown RBP11.86□□□□□ -0.51
SMPD3-203ENST00000563226 HYDINQ4G0P3 5121 aa11.86□□□□□ -0.51
SMPD3-203ENST00000563226 A0A1W2PNM2 257 aa11.86□□□□□ -0.51
SMPD3-203ENST00000563226 LINC00476Q8WZB0 136 aa11.85□□□□□ -0.51
SMPD3-203ENST00000563226 DNAH11Q96DT5 4516 aa11.85□□□□□ -0.51
SMPD3-203ENST00000563226 SCXQ7RTU7 201 aa11.85□□□□□ -0.51
SMPD3-203ENST00000563226 WWC2-AS2Q96NR7 200 aa11.84□□□□□ -0.51
SMPD3-203ENST00000563226 DNAH5Q8TE73 4624 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms