RNA–Protein interactions for RNA: ENST00000562638.5

TCF4-215, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 401 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-215ENST00000562638 A0A1B0GVX0 72 aa2.92□□□□□ -1.94
TCF4-215ENST00000562638 A0A1W2PNU3 283 aaPredicted RBP2.92□□□□□ -1.94
TCF4-215ENST00000562638 SLURP1P55000 103 aa2.92□□□□□ -1.94
TCF4-215ENST00000562638 C15orf56Q8N910 161 aa2.92□□□□□ -1.94
TCF4-215ENST00000562638 ICE1Q9Y2F5 2266 aa2.92□□□□□ -1.94
TCF4-215ENST00000562638 RPL37AP8A6NKH3 93 aa2.91□□□□□ -1.94
TCF4-215ENST00000562638 SPRR1AP35321 89 aa2.91□□□□□ -1.94
TCF4-215ENST00000562638 DEFB109BQ30KR1 87 aa2.91□□□□□ -1.94
TCF4-215ENST00000562638 UNQ6190/PRO20217Q6UXQ8 127 aa2.91□□□□□ -1.94
TCF4-215ENST00000562638 KRTAP11-1Q8IUC1 163 aa2.91□□□□□ -1.94
TCF4-215ENST00000562638 Q96NJ1 140 aa2.91□□□□□ -1.94
TCF4-215ENST00000562638 ANAPC11Q9NYG5 84 aa2.91□□□□□ -1.94
TCF4-215ENST00000562638 SPTBN5Q9NRC6 3674 aaKnown RBP2.9□□□□□ -1.94
TCF4-215ENST00000562638 DEFB131AP59861 70 aa2.9□□□□□ -1.95
TCF4-215ENST00000562638 KRTAP13-3Q3SY46 172 aa2.9□□□□□ -1.95
TCF4-215ENST00000562638 DEFB132Q7Z7B7 95 aa2.9□□□□□ -1.95
TCF4-215ENST00000562638 C6orf48Q9UBA6 75 aa2.9□□□□□ -1.95
TCF4-215ENST00000562638 CFAP47Q6ZTR5 3102 aa2.9□□□□□ -1.95
TCF4-215ENST00000562638 MKI67P46013 3256 aaKnown RBP2.9□□□□□ -1.95
TCF4-215ENST00000562638 FRYLO94915 3013 aa2.9□□□□□ -1.95
TCF4-215ENST00000562638 NBDYA0A0U1RRE5 68 aa2.89□□□□□ -1.95
TCF4-215ENST00000562638 RPL37AP61513 92 aaKnown RBP2.89□□□□□ -1.95
TCF4-215ENST00000562638 IGFL1Q6UW32 110 aa2.89□□□□□ -1.95
TCF4-215ENST00000562638 Q6ZRX8 168 aa2.89□□□□□ -1.95
TCF4-215ENST00000562638 USP34Q70CQ2 3546 aa2.88□□□□□ -1.95
TCF4-215ENST00000562638 LY6G6CO95867 125 aa2.88□□□□□ -1.95
TCF4-215ENST00000562638 SPINT4Q6UDR6 99 aa2.88□□□□□ -1.95
TCF4-215ENST00000562638 KRTAP3-1Q9BYR8 98 aa2.88□□□□□ -1.95
TCF4-215ENST00000562638 AHCTF1Q8WYP5 2266 aa2.86□□□□□ -1.95
TCF4-215ENST00000562638 CHD6Q8TD26 2715 aa2.86□□□□□ -1.95
TCF4-215ENST00000562638 HTN1P15515 57 aa2.86□□□□□ -1.95
TCF4-215ENST00000562638 CAMK2N1Q7Z7J9 78 aa2.86□□□□□ -1.95
TCF4-215ENST00000562638 Q8N1X5 172 aa2.86□□□□□ -1.95
TCF4-215ENST00000562638 DEFB105AQ8NG35 78 aa2.86□□□□□ -1.95
TCF4-215ENST00000562638 FRYQ5TBA9 3013 aa2.86□□□□□ -1.95
TCF4-215ENST00000562638 H0YAA0 97 aa2.85□□□□□ -1.95
TCF4-215ENST00000562638 KALRNO60229 2985 aa2.85□□□□□ -1.95
TCF4-215ENST00000562638 LINC01565O15544 149 aa2.84□□□□□ -1.95
TCF4-215ENST00000562638 OTOGQ6ZRI0 2925 aa2.84□□□□□ -1.96
TCF4-215ENST00000562638 FAM186AA6NE01 2351 aa2.83□□□□□ -1.96
TCF4-215ENST00000562638 SPTBN2O15020 2390 aa2.83□□□□□ -1.96
TCF4-215ENST00000562638 TPRXLQ17RH7 258 aa2.83□□□□□ -1.96
TCF4-215ENST00000562638 PSORS1C2Q9UIG4 136 aa2.83□□□□□ -1.96
TCF4-215ENST00000562638 PRUNE2Q8WUY3 3088 aa2.82□□□□□ -1.96
TCF4-215ENST00000562638 DEFB119Q8N690 84 aa2.82□□□□□ -1.96
TCF4-215ENST00000562638 C16orf74Q96GX8 76 aa2.82□□□□□ -1.96
TCF4-215ENST00000562638 DNAH14Q0VDD8 3507 aa2.82□□□□□ -1.96
TCF4-215ENST00000562638 WDFY4Q6ZS81 3184 aa2.81□□□□□ -1.96
TCF4-215ENST00000562638 A0A1W2PNN7 141 aa2.81□□□□□ -1.96
TCF4-215ENST00000562638 SPRR1BP22528 89 aa2.81□□□□□ -1.96
TCF4-215ENST00000562638 Q6ZSA8 131 aa2.81□□□□□ -1.96
TCF4-215ENST00000562638 MRPL34Q9BQ48 92 aaKnown RBP2.81□□□□□ -1.96
TCF4-215ENST00000562638 DMDP11532 3685 aa2.8□□□□□ -1.96
TCF4-215ENST00000562638 PKDREJQ9NTG1 2253 aa2.8□□□□□ -1.96
TCF4-215ENST00000562638 LYNX1P0DP58 116 aa2.8□□□□□ -1.96
TCF4-215ENST00000562638 TRIOO75962 3097 aa2.8□□□□□ -1.96
TCF4-215ENST00000562638 AKAP13Q12802 2813 aa2.8□□□□□ -1.96
TCF4-215ENST00000562638 A0A0G2JQZ4 141 aa2.79□□□□□ -1.96
TCF4-215ENST00000562638 SSBP3-AS1Q7Z2R9 100 aa2.79□□□□□ -1.96
TCF4-215ENST00000562638 NOP10Q9NPE3 64 aaKnown RBP2.79□□□□□ -1.96
TCF4-215ENST00000562638 CUL9Q8IWT3 2517 aa2.79□□□□□ -1.96
TCF4-215ENST00000562638 IGF2RP11717 2491 aa2.79□□□□□ -1.96
TCF4-215ENST00000562638 CACNA1BQ00975 2339 aa2.78□□□□□ -1.96
TCF4-215ENST00000562638 A0A1B0GU33 70 aa2.78□□□□□ -1.96
TCF4-215ENST00000562638 H3BUX3 64 aa2.78□□□□□ -1.96
TCF4-215ENST00000562638 CNOT1A5YKK6 2376 aaKnown RBP2.78□□□□□ -1.97
TCF4-215ENST00000562638 LAMA2P24043 3122 aaKnown RBP2.77□□□□□ -1.97
TCF4-215ENST00000562638 CEP250Q9BV73 2442 aa2.77□□□□□ -1.97
TCF4-215ENST00000562638 BRD3OSQ6XYD6 125 aa2.77□□□□□ -1.97
TCF4-215ENST00000562638 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.77□□□□□ -1.97
TCF4-215ENST00000562638 TENM2Q9NT68 2774 aa2.77□□□□□ -1.97
TCF4-215ENST00000562638 ASH1LQ9NR48 2969 aaKnown RBP2.76□□□□□ -1.97
TCF4-215ENST00000562638 GIG44P09565 113 aaPredicted RBP2.76□□□□□ -1.97
TCF4-215ENST00000562638 CACNA1EQ15878 2313 aa2.76□□□□□ -1.97
TCF4-215ENST00000562638 FREM2Q5SZK8 3169 aa2.75□□□□□ -1.97
TCF4-215ENST00000562638 GPR179Q6PRD1 2367 aa2.75□□□□□ -1.97
TCF4-215ENST00000562638 Q6YL49 198 aa2.75□□□□□ -1.97
TCF4-215ENST00000562638 CRIPTQ9P021 101 aa2.75□□□□□ -1.97
TCF4-215ENST00000562638 BOD1L1Q8NFC6 3051 aa2.75□□□□□ -1.97
TCF4-215ENST00000562638 PIEZO2Q9H5I5 2752 aa2.75□□□□□ -1.97
TCF4-215ENST00000562638 COL6A6A6NMZ7 2263 aa2.75□□□□□ -1.97
TCF4-215ENST00000562638 LAMA1P25391 3075 aa2.74□□□□□ -1.97
TCF4-215ENST00000562638 TRIOBPQ9H2D6 2365 aa2.74□□□□□ -1.97
TCF4-215ENST00000562638 PCNX1Q96RV3 2341 aa2.74□□□□□ -1.97
TCF4-215ENST00000562638 MAP1BP46821 2468 aaKnown RBP2.74□□□□□ -1.97
TCF4-215ENST00000562638 K7EIL1 84 aa2.74□□□□□ -1.97
TCF4-215ENST00000562638 IGKV2-30P06310 120 aa2.74□□□□□ -1.97
TCF4-215ENST00000562638 PRO0255Q9UI72 69 aa2.74□□□□□ -1.97
TCF4-215ENST00000562638 LAMA3Q16787 3333 aa2.73□□□□□ -1.97
TCF4-215ENST00000562638 IGKV2D-30A0A075B6S6 120 aa2.73□□□□□ -1.97
TCF4-215ENST00000562638 KRTAP24-1Q3LI83 254 aa2.73□□□□□ -1.97
TCF4-215ENST00000562638 H1FX-AS1Q4G0G2 97 aa2.73□□□□□ -1.97
TCF4-215ENST00000562638 KRTAP7-1Q8IUC3 87 aa2.73□□□□□ -1.97
TCF4-215ENST00000562638 WWC2-AS2Q96NR7 200 aa2.73□□□□□ -1.97
TCF4-215ENST00000562638 DSPP15924 2871 aaKnown RBP2.73□□□□□ -1.97
TCF4-215ENST00000562638 TPRP12270 2363 aaKnown RBP2.72□□□□□ -1.97
TCF4-215ENST00000562638 MAP1AP78559 2803 aaPredicted RBP2.72□□□□□ -1.97
TCF4-215ENST00000562638 DEFB136Q30KP8 78 aa2.72□□□□□ -1.97
TCF4-215ENST00000562638 LELP1Q5T871 98 aa2.72□□□□□ -1.97
TCF4-215ENST00000562638 C4orf3Q8WVX3 66 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms