RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 SPANXCQ9NY87 97 aa7.62□□□□□ -1.19
CTDSPL2-209ENST00000560620 B5MCH6 92 aa7.61□□□□□ -1.19
CTDSPL2-209ENST00000560620 KRTAP4-16G5E9R7 235 aaPredicted RBP7.61□□□□□ -1.19
CTDSPL2-209ENST00000560620 IGLV6-57P01721 117 aa7.61□□□□□ -1.19
CTDSPL2-209ENST00000560620 ANKRD39Q53RE8 183 aa7.61□□□□□ -1.19
CTDSPL2-209ENST00000560620 HIST3H2BBQ8N257 126 aa7.61□□□□□ -1.19
CTDSPL2-209ENST00000560620 LINC00304Q8N9R0 145 aa7.61□□□□□ -1.19
CTDSPL2-209ENST00000560620 PPDPFQ9H3Y8 114 aa7.61□□□□□ -1.19
CTDSPL2-209ENST00000560620 CBY1Q9Y3M2 126 aa7.61□□□□□ -1.19
CTDSPL2-209ENST00000560620 LRP2P98164 4655 aa7.6□□□□□ -1.19
CTDSPL2-209ENST00000560620 HINT1P49773 126 aaPredicted RBP7.6□□□□□ -1.19
CTDSPL2-209ENST00000560620 HIST1H2BLQ99880 126 aa7.6□□□□□ -1.19
CTDSPL2-209ENST00000560620 ZNF73O43830 326 aaPredicted RBP7.59□□□□□ -1.19
CTDSPL2-209ENST00000560620 JOSD1Q15040 202 aaPredicted RBP7.59□□□□□ -1.19
CTDSPL2-209ENST00000560620 Q6ZRX8 168 aa7.59□□□□□ -1.19
CTDSPL2-209ENST00000560620 C3orf22Q8N5N4 141 aa7.59□□□□□ -1.19
CTDSPL2-209ENST00000560620 HSBP1L1C9JCN9 74 aa7.58□□□□□ -1.2
CTDSPL2-209ENST00000560620 GAGE2AQ6NT46 116 aa7.58□□□□□ -1.2
CTDSPL2-209ENST00000560620 COPS9Q8WXC6 57 aa7.58□□□□□ -1.2
CTDSPL2-209ENST00000560620 SNRPEP62304 92 aaKnown RBP7.57□□□□□ -1.2
CTDSPL2-209ENST00000560620 PCP2Q8IVA1 136 aa7.57□□□□□ -1.2
CTDSPL2-209ENST00000560620 LINC00518Q8N0U6 118 aa7.57□□□□□ -1.2
CTDSPL2-209ENST00000560620 ERC2-IT1O76042 136 aa7.56□□□□□ -1.2
CTDSPL2-209ENST00000560620 C4orf48Q5BLP8 95 aa7.56□□□□□ -1.2
CTDSPL2-209ENST00000560620 Q9BRP9 147 aa7.56□□□□□ -1.2
CTDSPL2-209ENST00000560620 SPANXDQ9BXN6 97 aa7.56□□□□□ -1.2
CTDSPL2-209ENST00000560620 KRTAP3-3Q9BYR6 98 aa7.55□□□□□ -1.2
CTDSPL2-209ENST00000560620 KRTAP3-2Q9BYR7 98 aa7.55□□□□□ -1.2
CTDSPL2-209ENST00000560620 IGLV9-49A0A0B4J1Y8 123 aa7.54□□□□□ -1.2
CTDSPL2-209ENST00000560620 RETNLBQ9BQ08 111 aa7.54□□□□□ -1.2
CTDSPL2-209ENST00000560620 A6NDN8 102 aa7.53□□□□□ -1.2
CTDSPL2-209ENST00000560620 SCGB1D1O95968 90 aa7.53□□□□□ -1.2
CTDSPL2-209ENST00000560620 IFITM1P13164 125 aa7.53□□□□□ -1.2
CTDSPL2-209ENST00000560620 Q6ZVH6 145 aa7.53□□□□□ -1.2
CTDSPL2-209ENST00000560620 MUSTN1Q8IVN3 82 aa7.53□□□□□ -1.2
CTDSPL2-209ENST00000560620 SPAG11AQ6PDA7 123 aa7.52□□□□□ -1.21
CTDSPL2-209ENST00000560620 Q8NBF4 154 aa7.52□□□□□ -1.21
CTDSPL2-209ENST00000560620 MOBPQ13875 183 aa7.51□□□□□ -1.21
CTDSPL2-209ENST00000560620 C6orf99Q4VX62 202 aa7.51□□□□□ -1.21
CTDSPL2-209ENST00000560620 LINC00483Q53H64 154 aa7.51□□□□□ -1.21
CTDSPL2-209ENST00000560620 RNF213Q63HN8 5207 aa7.5□□□□□ -1.21
CTDSPL2-209ENST00000560620 LPAP08519 4548 aa7.5□□□□□ -1.21
CTDSPL2-209ENST00000560620 COX7BP24311 80 aa7.5□□□□□ -1.21
CTDSPL2-209ENST00000560620 ST20-AS1Q8NBB2 130 aa7.5□□□□□ -1.21
CTDSPL2-209ENST00000560620 DHRS4-AS1Q9P1J3 65 aa7.5□□□□□ -1.21
CTDSPL2-209ENST00000560620 C9orf153Q5TBE3 101 aa7.49□□□□□ -1.21
CTDSPL2-209ENST00000560620 C5orf52A6NGY3 159 aa7.48□□□□□ -1.21
CTDSPL2-209ENST00000560620 TRAV13-2A0A0B4J235 113 aa7.47□□□□□ -1.21
CTDSPL2-209ENST00000560620 ELOF1P60002 83 aaKnown RBP7.47□□□□□ -1.21
CTDSPL2-209ENST00000560620 CTAG1AP78358 180 aa7.47□□□□□ -1.21
CTDSPL2-209ENST00000560620 SPINK1P00995 79 aa7.45□□□□□ -1.22
CTDSPL2-209ENST00000560620 TAL2Q16559 108 aa7.45□□□□□ -1.22
CTDSPL2-209ENST00000560620 SLC25A34Q6PIV7 304 aa7.45□□□□□ -1.22
CTDSPL2-209ENST00000560620 SSBP3-AS1Q7Z2R9 100 aa7.45□□□□□ -1.22
CTDSPL2-209ENST00000560620 DEFB105AQ8NG35 78 aa7.45□□□□□ -1.22
CTDSPL2-209ENST00000560620 IGLV7-46A0A075B6I9 117 aa7.44□□□□□ -1.22
CTDSPL2-209ENST00000560620 A0A1B0GWB2 263 aa7.43□□□□□ -1.22
CTDSPL2-209ENST00000560620 HIST1H4GQ99525 98 aa7.43□□□□□ -1.22
CTDSPL2-209ENST00000560620 TRBV7-6A0A0J9YX20 115 aa7.42□□□□□ -1.22
CTDSPL2-209ENST00000560620 SMIM11BQ8TCY0 68 aa7.42□□□□□ -1.22
CTDSPL2-209ENST00000560620 CDIP1Q9H305 208 aa7.42□□□□□ -1.22
CTDSPL2-209ENST00000560620 LAMTOR3Q9UHA4 124 aa7.42□□□□□ -1.22
CTDSPL2-209ENST00000560620 A4D1N5 150 aa7.41□□□□□ -1.22
CTDSPL2-209ENST00000560620 COX8AP10176 69 aa7.41□□□□□ -1.22
CTDSPL2-209ENST00000560620 PAM16Q9Y3D7 125 aa7.41□□□□□ -1.22
CTDSPL2-209ENST00000560620 VAMP3Q15836 100 aa7.4□□□□□ -1.22
CTDSPL2-209ENST00000560620 Q1RN00 199 aa7.4□□□□□ -1.22
CTDSPL2-209ENST00000560620 C14orf144Q96I85 54 aa7.4□□□□□ -1.22
CTDSPL2-209ENST00000560620 C12orf57Q99622 126 aa7.4□□□□□ -1.22
CTDSPL2-209ENST00000560620 SLC25A20O43772 301 aa7.39□□□□□ -1.23
CTDSPL2-209ENST00000560620 SPRR1BP22528 89 aa7.39□□□□□ -1.23
CTDSPL2-209ENST00000560620 SPATA45Q537H7 98 aa7.39□□□□□ -1.23
CTDSPL2-209ENST00000560620 VAMP8Q9BV40 100 aa7.39□□□□□ -1.23
CTDSPL2-209ENST00000560620 NHP2Q9NX24 153 aaKnown RBP7.39□□□□□ -1.23
CTDSPL2-209ENST00000560620 TEX49A0A1B0GTD5 131 aa7.38□□□□□ -1.23
CTDSPL2-209ENST00000560620 HRCT1Q6UXD1 115 aa7.38□□□□□ -1.23
CTDSPL2-209ENST00000560620 FP248Q71RG6 208 aaPredicted RBP7.38□□□□□ -1.23
CTDSPL2-209ENST00000560620 TPRXLQ17RH7 258 aa7.37□□□□□ -1.23
CTDSPL2-209ENST00000560620 RPS29P62273 56 aaKnown RBP7.36□□□□□ -1.23
CTDSPL2-209ENST00000560620 DLEU1O43261 78 aa7.35□□□□□ -1.23
CTDSPL2-209ENST00000560620 Q8N377 158 aa7.35□□□□□ -1.23
CTDSPL2-209ENST00000560620 TMA7Q9Y2S6 64 aaKnown RBP7.34□□□□□ -1.23
CTDSPL2-209ENST00000560620 H7C2G1 150 aa7.33□□□□□ -1.24
CTDSPL2-209ENST00000560620 PRO1933Q9H354 126 aa7.33□□□□□ -1.24
CTDSPL2-209ENST00000560620 RAB37Q96AX2 223 aa7.32□□□□□ -1.24
CTDSPL2-209ENST00000560620 LIMD2Q9BT23 127 aa7.32□□□□□ -1.24
CTDSPL2-209ENST00000560620 IGLV5-48A0A075B6I7 105 aa7.31□□□□□ -1.24
CTDSPL2-209ENST00000560620 hADV29S1A0JD25 119 aa7.31□□□□□ -1.24
CTDSPL2-209ENST00000560620 BVES-AS1Q5T3Y7 98 aa7.31□□□□□ -1.24
CTDSPL2-209ENST00000560620 LINC00575Q6W349 94 aa7.31□□□□□ -1.24
CTDSPL2-209ENST00000560620 HIGD1BQ9P298 99 aa7.31□□□□□ -1.24
CTDSPL2-209ENST00000560620 F8WEM9 126 aa7.3□□□□□ -1.24
CTDSPL2-209ENST00000560620 LINC01547P58512 204 aaPredicted RBP7.3□□□□□ -1.24
CTDSPL2-209ENST00000560620 CFC1BP0CG36 223 aa7.29□□□□□ -1.24
CTDSPL2-209ENST00000560620 CFC1P0CG37 223 aa7.29□□□□□ -1.24
CTDSPL2-209ENST00000560620 Q6ZQY7 126 aa7.29□□□□□ -1.24
CTDSPL2-209ENST00000560620 SMIM29Q86T20 159 aa7.29□□□□□ -1.24
CTDSPL2-209ENST00000560620 KRTAP13-3Q3SY46 172 aa7.28□□□□□ -1.24
CTDSPL2-209ENST00000560620 C2orf91Q6ZV80 131 aa7.28□□□□□ -1.24
CTDSPL2-209ENST00000560620 TMEM238LA0A1B0GVL6 79 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms