RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 USP9XQ93008 2570 aaPredicted RBP3.69□□□□□ -1.82
GABPB1-207ENST00000558335 DCHS1Q96JQ0 3298 aa3.69□□□□□ -1.82
GABPB1-207ENST00000558335 IGHV6-1A0A0B4J1U7 121 aa3.68□□□□□ -1.82
GABPB1-207ENST00000558335 CLPSL2Q6UWE3 100 aa3.68□□□□□ -1.82
GABPB1-207ENST00000558335 Q8N9P0 234 aaPredicted RBP3.68□□□□□ -1.82
GABPB1-207ENST00000558335 DHRS4-AS1Q9P1J3 65 aa3.68□□□□□ -1.82
GABPB1-207ENST00000558335 KLK12Q9UKR0 248 aa3.68□□□□□ -1.82
GABPB1-207ENST00000558335 PLA2G2DQ9UNK4 145 aa3.68□□□□□ -1.82
GABPB1-207ENST00000558335 MYO9AB2RTY4 2548 aa3.68□□□□□ -1.82
GABPB1-207ENST00000558335 PIEZO1Q92508 2521 aa3.68□□□□□ -1.82
GABPB1-207ENST00000558335 CELSR1Q9NYQ6 3014 aa3.67□□□□□ -1.82
GABPB1-207ENST00000558335 UTP20O75691 2785 aaKnown RBP3.67□□□□□ -1.82
GABPB1-207ENST00000558335 IGLV10-54A0A075B6I4 117 aa3.67□□□□□ -1.82
GABPB1-207ENST00000558335 A0A096LPF7 62 aa3.67□□□□□ -1.82
GABPB1-207ENST00000558335 KRTAP9-6A0A140TA67 174 aa3.67□□□□□ -1.82
GABPB1-207ENST00000558335 UNQ6190/PRO20217Q6UXQ8 127 aa3.67□□□□□ -1.82
GABPB1-207ENST00000558335 Q6ZQY7 126 aa3.67□□□□□ -1.82
GABPB1-207ENST00000558335 ZCCHC13Q8WW36 166 aaKnown RBP3.67□□□□□ -1.82
GABPB1-207ENST00000558335 B9D2Q9BPU9 175 aa3.67□□□□□ -1.82
GABPB1-207ENST00000558335 USP9YO00507 2555 aaPredicted RBP3.67□□□□□ -1.82
GABPB1-207ENST00000558335 HIGD2BQ4VC39 106 aa3.66□□□□□ -1.82
GABPB1-207ENST00000558335 LINC01556Q5JQF7 62 aa3.66□□□□□ -1.82
GABPB1-207ENST00000558335 RETNLBQ9BQ08 111 aa3.66□□□□□ -1.82
GABPB1-207ENST00000558335 PRR15LQ9BU68 103 aa3.66□□□□□ -1.82
GABPB1-207ENST00000558335 XAGE1AQ9HD64 81 aa3.66□□□□□ -1.82
GABPB1-207ENST00000558335 FLNCQ14315 2725 aa3.66□□□□□ -1.82
GABPB1-207ENST00000558335 CFAP46Q8IYW2 2715 aa3.65□□□□□ -1.82
GABPB1-207ENST00000558335 ASH1LQ9NR48 2969 aaKnown RBP3.65□□□□□ -1.82
GABPB1-207ENST00000558335 TLX1NBP0CAT3 122 aa3.65□□□□□ -1.83
GABPB1-207ENST00000558335 HTN3P15516 51 aa3.65□□□□□ -1.83
GABPB1-207ENST00000558335 MOBPQ13875 183 aa3.65□□□□□ -1.83
GABPB1-207ENST00000558335 LINC00208Q96KT6 92 aa3.65□□□□□ -1.83
GABPB1-207ENST00000558335 FAM30AQ9NZY2 134 aa3.65□□□□□ -1.83
GABPB1-207ENST00000558335 C6orf48Q9UBA6 75 aa3.65□□□□□ -1.83
GABPB1-207ENST00000558335 FAM208BQ5VWN6 2430 aa3.65□□□□□ -1.83
GABPB1-207ENST00000558335 CSMD1Q96PZ7 3565 aa3.65□□□□□ -1.83
GABPB1-207ENST00000558335 TEX15Q9BXT5 2789 aa3.65□□□□□ -1.83
GABPB1-207ENST00000558335 MXRA5Q9NR99 2828 aa3.65□□□□□ -1.83
GABPB1-207ENST00000558335 WNK1Q9H4A3 2382 aa3.65□□□□□ -1.83
GABPB1-207ENST00000558335 A0A0A0MQY5 61 aa3.64□□□□□ -1.83
GABPB1-207ENST00000558335 ETDCA0A1B0GVM5 59 aa3.64□□□□□ -1.83
GABPB1-207ENST00000558335 FAM229AH3BQW9 127 aa3.64□□□□□ -1.83
GABPB1-207ENST00000558335 C9orf129Q5T035 196 aaKnown RBP3.64□□□□□ -1.83
GABPB1-207ENST00000558335 KPRPQ5T749 579 aaPredicted RBP3.64□□□□□ -1.83
GABPB1-207ENST00000558335 HIGD2AQ9BW72 106 aa3.64□□□□□ -1.83
GABPB1-207ENST00000558335 KCNQ1DNQ9H478 68 aa3.64□□□□□ -1.83
GABPB1-207ENST00000558335 RELNP78509 3460 aa3.64□□□□□ -1.83
GABPB1-207ENST00000558335 ZNF462Q96JM2 2506 aa3.64□□□□□ -1.83
GABPB1-207ENST00000558335 CHD6Q8TD26 2715 aa3.64□□□□□ -1.83
GABPB1-207ENST00000558335 TLN2Q9Y4G6 2542 aa3.63□□□□□ -1.83
GABPB1-207ENST00000558335 IGLV5-37A0A075B6J1 123 aa3.63□□□□□ -1.83
GABPB1-207ENST00000558335 RPL37AP8A6NKH3 93 aa3.63□□□□□ -1.83
GABPB1-207ENST00000558335 KRTAP10-3P60369 221 aa3.63□□□□□ -1.83
GABPB1-207ENST00000558335 C10orf25Q5T742 122 aa3.63□□□□□ -1.83
GABPB1-207ENST00000558335 LINC01558Q9Y6Z2 57 aa3.63□□□□□ -1.83
GABPB1-207ENST00000558335 ITPR3Q14573 2671 aa3.63□□□□□ -1.83
GABPB1-207ENST00000558335 LRRK2Q5S007 2527 aa3.63□□□□□ -1.83
GABPB1-207ENST00000558335 DNAH10OSP0CZ25 163 aa3.62□□□□□ -1.83
GABPB1-207ENST00000558335 CNBPP62633 177 aaKnown RBP3.62□□□□□ -1.83
GABPB1-207ENST00000558335 PTPN13Q12923 2485 aa3.62□□□□□ -1.83
GABPB1-207ENST00000558335 IGLV5-48A0A075B6I7 105 aa3.61□□□□□ -1.83
GABPB1-207ENST00000558335 IGKV2D-24A0A075B6R9 120 aa3.61□□□□□ -1.83
GABPB1-207ENST00000558335 DEFB4AO15263 64 aa3.61□□□□□ -1.83
GABPB1-207ENST00000558335 KRTAP4-12Q9BQ66 201 aa3.61□□□□□ -1.83
GABPB1-207ENST00000558335 CELSR2Q9HCU4 2923 aa3.6□□□□□ -1.83
GABPB1-207ENST00000558335 DEFB131BA0A096LNP1 70 aa3.6□□□□□ -1.83
GABPB1-207ENST00000558335 LRCOL1A6NCL2 159 aa3.6□□□□□ -1.83
GABPB1-207ENST00000558335 IGKV4-1P06312 121 aa3.6□□□□□ -1.83
GABPB1-207ENST00000558335 ZNF706Q9Y5V0 76 aaPredicted RBP3.6□□□□□ -1.83
GABPB1-207ENST00000558335 CRYBG3Q68DQ2 2970 aa3.6□□□□□ -1.83
GABPB1-207ENST00000558335 COL12A1Q99715 3063 aa3.59□□□□□ -1.83
GABPB1-207ENST00000558335 USP24Q9UPU5 2620 aa3.59□□□□□ -1.83
GABPB1-207ENST00000558335 APCP25054 2843 aa3.59□□□□□ -1.83
GABPB1-207ENST00000558335 INAFM1C9JVW0 142 aa3.59□□□□□ -1.83
GABPB1-207ENST00000558335 C14orf177Q52M58 125 aa3.59□□□□□ -1.83
GABPB1-207ENST00000558335 KRTAP26-1Q6PEX3 210 aa3.59□□□□□ -1.83
GABPB1-207ENST00000558335 Q6ZRX8 168 aa3.59□□□□□ -1.83
GABPB1-207ENST00000558335 WFDC10BQ8IUB3 73 aa3.59□□□□□ -1.83
GABPB1-207ENST00000558335 C15orf56Q8N910 161 aa3.59□□□□□ -1.83
GABPB1-207ENST00000558335 ZFHX3Q15911 3703 aa3.59□□□□□ -1.84
GABPB1-207ENST00000558335 HIVEP2P31629 2446 aa3.59□□□□□ -1.84
GABPB1-207ENST00000558335 FLNAP21333 2647 aaKnown RBP3.58□□□□□ -1.84
GABPB1-207ENST00000558335 LCE3BQ5TA77 95 aa3.58□□□□□ -1.84
GABPB1-207ENST00000558335 PLAC8Q9NZF1 115 aa3.58□□□□□ -1.84
GABPB1-207ENST00000558335 POLQO75417 2590 aa3.58□□□□□ -1.84
GABPB1-207ENST00000558335 SETXQ7Z333 2677 aaKnown RBP3.58□□□□□ -1.84
GABPB1-207ENST00000558335 KMT2BQ9UMN6 2715 aaPredicted RBP3.58□□□□□ -1.84
GABPB1-207ENST00000558335 MAP1AP78559 2803 aaPredicted RBP3.58□□□□□ -1.84
GABPB1-207ENST00000558335 SVEP1Q4LDE5 3571 aa3.58□□□□□ -1.84
GABPB1-207ENST00000558335 NOTCH3Q9UM47 2321 aa3.58□□□□□ -1.84
GABPB1-207ENST00000558335 ABCA12Q86UK0 2595 aa3.57□□□□□ -1.84
GABPB1-207ENST00000558335 EPG5Q9HCE0 2579 aa3.57□□□□□ -1.84
GABPB1-207ENST00000558335 ZANQ9Y493 2812 aa3.57□□□□□ -1.84
GABPB1-207ENST00000558335 FBN2P35556 2912 aa3.57□□□□□ -1.84
GABPB1-207ENST00000558335 VPS13CQ709C8 3753 aa3.57□□□□□ -1.84
GABPB1-207ENST00000558335 IGLV1-50A0A075B6I6 118 aa3.57□□□□□ -1.84
GABPB1-207ENST00000558335 SPRR1AP35321 89 aa3.57□□□□□ -1.84
GABPB1-207ENST00000558335 Q8NDZ9 215 aa3.57□□□□□ -1.84
GABPB1-207ENST00000558335 CENPEQ02224 2701 aa3.57□□□□□ -1.84
GABPB1-207ENST00000558335 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms