RNA–Protein interactions for RNA: ENST00000552620.1

CHMP4A-210, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 716 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-210ENST00000552620 KPRPQ5T749 579 aaPredicted RBP3.95□□□□□ -1.78
CHMP4A-210ENST00000552620 Q6ZVQ6 151 aa3.95□□□□□ -1.78
CHMP4A-210ENST00000552620 SMIM29Q86T20 159 aa3.95□□□□□ -1.78
CHMP4A-210ENST00000552620 MRAPQ8TCY5 172 aa3.95□□□□□ -1.78
CHMP4A-210ENST00000552620 HIVEP2P31629 2446 aa3.95□□□□□ -1.78
CHMP4A-210ENST00000552620 NF1P21359 2839 aa3.94□□□□□ -1.78
CHMP4A-210ENST00000552620 FLNAP21333 2647 aaKnown RBP3.94□□□□□ -1.78
CHMP4A-210ENST00000552620 SETXQ7Z333 2677 aaKnown RBP3.94□□□□□ -1.78
CHMP4A-210ENST00000552620 TRAV7A0A075B6U4 112 aa3.94□□□□□ -1.78
CHMP4A-210ENST00000552620 LINC01547P58512 204 aaPredicted RBP3.94□□□□□ -1.78
CHMP4A-210ENST00000552620 FAM19A1Q7Z5A9 133 aa3.94□□□□□ -1.78
CHMP4A-210ENST00000552620 XAGE1AQ9HD64 81 aa3.94□□□□□ -1.78
CHMP4A-210ENST00000552620 ZFYVE26Q68DK2 2539 aa3.94□□□□□ -1.78
CHMP4A-210ENST00000552620 ZNF469Q96JG9 3925 aaPredicted RBP3.94□□□□□ -1.78
CHMP4A-210ENST00000552620 CCDC168Q8NDH2 2452 aa3.94□□□□□ -1.78
CHMP4A-210ENST00000552620 JMJD1CQ15652 2540 aa3.93□□□□□ -1.78
CHMP4A-210ENST00000552620 HAMPP81172 84 aa3.93□□□□□ -1.78
CHMP4A-210ENST00000552620 LINC01556Q5JQF7 62 aa3.93□□□□□ -1.78
CHMP4A-210ENST00000552620 Q6ZRU5 148 aa3.93□□□□□ -1.78
CHMP4A-210ENST00000552620 DPH3Q96FX2 82 aa3.93□□□□□ -1.78
CHMP4A-210ENST00000552620 FN1P02751 2386 aaKnown RBP3.92□□□□□ -1.78
CHMP4A-210ENST00000552620 A0A1B0GW54 56 aa3.92□□□□□ -1.78
CHMP4A-210ENST00000552620 SYCNQ0VAF6 134 aa3.92□□□□□ -1.78
CHMP4A-210ENST00000552620 ESRGQ1W209 222 aa3.92□□□□□ -1.78
CHMP4A-210ENST00000552620 HIGD2BQ4VC39 106 aa3.92□□□□□ -1.78
CHMP4A-210ENST00000552620 WFDC10BQ8IUB3 73 aa3.92□□□□□ -1.78
CHMP4A-210ENST00000552620 C15orf56Q8N910 161 aa3.92□□□□□ -1.78
CHMP4A-210ENST00000552620 ACANP16112 2415 aa3.91□□□□□ -1.78
CHMP4A-210ENST00000552620 TLX1NBP0CAT3 122 aa3.91□□□□□ -1.78
CHMP4A-210ENST00000552620 KCNQ1DNQ9H478 68 aa3.91□□□□□ -1.78
CHMP4A-210ENST00000552620 NBPF19A0A087WUL8 3843 aa3.91□□□□□ -1.78
CHMP4A-210ENST00000552620 IGKV2D-24A0A075B6R9 120 aa3.9□□□□□ -1.79
CHMP4A-210ENST00000552620 M0R2N4 97 aa3.9□□□□□ -1.79
CHMP4A-210ENST00000552620 DNAH10OSP0CZ25 163 aa3.9□□□□□ -1.79
CHMP4A-210ENST00000552620 Q6ZTC4 211 aa3.9□□□□□ -1.79
CHMP4A-210ENST00000552620 FAM19A5Q7Z5A7 132 aaPredicted RBP3.9□□□□□ -1.79
CHMP4A-210ENST00000552620 CYSTM1Q9H1C7 97 aa3.9□□□□□ -1.79
CHMP4A-210ENST00000552620 V9GYY9 64 aa3.9□□□□□ -1.79
CHMP4A-210ENST00000552620 DEFB131BA0A096LNP1 70 aa3.89□□□□□ -1.79
CHMP4A-210ENST00000552620 NDUFC1O43677 76 aa3.89□□□□□ -1.79
CHMP4A-210ENST00000552620 ERC2-IT1O76042 136 aa3.89□□□□□ -1.79
CHMP4A-210ENST00000552620 Q6ZRP5 223 aa3.89□□□□□ -1.79
CHMP4A-210ENST00000552620 NKAPP1Q8N9T2 125 aa3.89□□□□□ -1.79
CHMP4A-210ENST00000552620 C11orf45Q8TAV5 145 aa3.89□□□□□ -1.79
CHMP4A-210ENST00000552620 DHRS4-AS1Q9P1J3 65 aa3.89□□□□□ -1.79
CHMP4A-210ENST00000552620 IGLV5-48A0A075B6I7 105 aa3.88□□□□□ -1.79
CHMP4A-210ENST00000552620 TRAV10A0A0B4J240 114 aa3.88□□□□□ -1.79
CHMP4A-210ENST00000552620 KRTAP10-11P60412 298 aa3.88□□□□□ -1.79
CHMP4A-210ENST00000552620 KLKP1Q107X0 134 aa3.88□□□□□ -1.79
CHMP4A-210ENST00000552620 NREPQ16612 68 aa3.88□□□□□ -1.79
CHMP4A-210ENST00000552620 C20orf197Q8N268 126 aa3.88□□□□□ -1.79
CHMP4A-210ENST00000552620 RMI2Q96E14 147 aa3.88□□□□□ -1.79
CHMP4A-210ENST00000552620 MTORP42345 2549 aa3.88□□□□□ -1.79
CHMP4A-210ENST00000552620 SETD2Q9BYW2 2564 aaPredicted RBP3.88□□□□□ -1.79
CHMP4A-210ENST00000552620 NIPBLQ6KC79 2804 aaeCLIP3.87□□□□□ -1.79
CHMP4A-210ENST00000552620 FAM236DA0A1B0GTK5 79 aa3.87□□□□□ -1.79
CHMP4A-210ENST00000552620 FAM236CP0DP71 79 aa3.87□□□□□ -1.79
CHMP4A-210ENST00000552620 Q8N377 158 aa3.87□□□□□ -1.79
CHMP4A-210ENST00000552620 C7orf33Q8WU49 177 aa3.87□□□□□ -1.79
CHMP4A-210ENST00000552620 PRAC1Q96KF2 57 aa3.87□□□□□ -1.79
CHMP4A-210ENST00000552620 RETNQ9HD89 108 aa3.87□□□□□ -1.79
CHMP4A-210ENST00000552620 H7BZZ5 65 aa3.86□□□□□ -1.79
CHMP4A-210ENST00000552620 BPY2O14599 106 aa3.86□□□□□ -1.79
CHMP4A-210ENST00000552620 SPRR1AP35321 89 aa3.86□□□□□ -1.79
CHMP4A-210ENST00000552620 ATP5EP56381 51 aaPredicted RBP3.86□□□□□ -1.79
CHMP4A-210ENST00000552620 SERP1Q9Y6X1 66 aa3.86□□□□□ -1.79
CHMP4A-210ENST00000552620 NBEAL2Q6ZNJ1 2754 aa3.85□□□□□ -1.79
CHMP4A-210ENST00000552620 IGLV1-50A0A075B6I6 118 aa3.85□□□□□ -1.79
CHMP4A-210ENST00000552620 ETDCA0A1B0GVM5 59 aa3.85□□□□□ -1.79
CHMP4A-210ENST00000552620 EPM2AB3EWF7 344 aa3.85□□□□□ -1.79
CHMP4A-210ENST00000552620 IGKV4-1P06312 121 aa3.85□□□□□ -1.79
CHMP4A-210ENST00000552620 FUSP35637 526 aaKnown RBP eCLIP3.85□□□□□ -1.79
CHMP4A-210ENST00000552620 Q6ZRX8 168 aa3.85□□□□□ -1.79
CHMP4A-210ENST00000552620 CUBNO60494 3623 aa3.84□□□□□ -1.79
CHMP4A-210ENST00000552620 ITPR2Q14571 2701 aa3.84□□□□□ -1.79
CHMP4A-210ENST00000552620 TENM4Q6N022 2769 aa3.84□□□□□ -1.79
CHMP4A-210ENST00000552620 KRTAP4-16G5E9R7 235 aaPredicted RBP3.84□□□□□ -1.79
CHMP4A-210ENST00000552620 SCXQ7RTU7 201 aa3.84□□□□□ -1.79
CHMP4A-210ENST00000552620 TM2D3Q9BRN9 247 aa3.84□□□□□ -1.79
CHMP4A-210ENST00000552620 NOTCH2Q04721 2471 aa3.83□□□□□ -1.8
CHMP4A-210ENST00000552620 DEFB105AQ8NG35 78 aa3.83□□□□□ -1.8
CHMP4A-210ENST00000552620 LINC00588Q9Y4M8 146 aa3.83□□□□□ -1.8
CHMP4A-210ENST00000552620 F8WEM9 126 aa3.82□□□□□ -1.8
CHMP4A-210ENST00000552620 OXTP01178 125 aa3.82□□□□□ -1.8
CHMP4A-210ENST00000552620 LINC00336Q6ZUF6 198 aa3.82□□□□□ -1.8
CHMP4A-210ENST00000552620 MRPL55Q7Z7F7 128 aaKnown RBP3.82□□□□□ -1.8
CHMP4A-210ENST00000552620 TMEM254Q8TBM7 123 aa3.82□□□□□ -1.8
CHMP4A-210ENST00000552620 SPRR4Q96PI1 79 aa3.82□□□□□ -1.8
CHMP4A-210ENST00000552620 KMT2BQ9UMN6 2715 aaPredicted RBP3.82□□□□□ -1.8
CHMP4A-210ENST00000552620 GCN1Q92616 2671 aaKnown RBP3.82□□□□□ -1.8
CHMP4A-210ENST00000552620 UNC79Q9P2D8 2635 aa3.82□□□□□ -1.8
CHMP4A-210ENST00000552620 SMIM26A0A096LP01 95 aa3.81□□□□□ -1.8
CHMP4A-210ENST00000552620 A0A1W2PNM2 257 aa3.81□□□□□ -1.8
CHMP4A-210ENST00000552620 RPL37AP8A6NKH3 93 aa3.81□□□□□ -1.8
CHMP4A-210ENST00000552620 KRTAP24-1Q3LI83 254 aa3.81□□□□□ -1.8
CHMP4A-210ENST00000552620 C1orf137Q5JT78 98 aa3.81□□□□□ -1.8
CHMP4A-210ENST00000552620 Q8NBF4 154 aa3.81□□□□□ -1.8
CHMP4A-210ENST00000552620 Q9BRP9 147 aa3.81□□□□□ -1.8
CHMP4A-210ENST00000552620 OCR1Q9BZK8 76 aa3.81□□□□□ -1.8
CHMP4A-210ENST00000552620 SNURFQ9Y675 71 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms