RNA–Protein interactions for RNA: ENST00000550233.1

TMEM116-211, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 5

Gene TMEM116, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-211ENST00000550233 HEPN1Q6WQI6 88 aa0.68□□□□□ -2.3
TMEM116-211ENST00000550233 HIVEP3Q5T1R4 2406 aa0.68□□□□□ -2.3
TMEM116-211ENST00000550233 CHD8Q9HCK8 2581 aa0.67□□□□□ -2.3
TMEM116-211ENST00000550233 UBR5O95071 2799 aaPredicted RBP0.67□□□□□ -2.3
TMEM116-211ENST00000550233 CSPG4Q6UVK1 2322 aa0.67□□□□□ -2.3
TMEM116-211ENST00000550233 SCN11AQ9UI33 1791 aa0.67□□□□□ -2.3
TMEM116-211ENST00000550233 CD163L1Q9NR16 1453 aa0.67□□□□□ -2.3
TMEM116-211ENST00000550233 NWD1Q149M9 1564 aa0.66□□□□□ -2.3
TMEM116-211ENST00000550233 ZNF831Q5JPB2 1677 aa0.66□□□□□ -2.3
TMEM116-211ENST00000550233 AHNAK2Q8IVF2 5795 aa0.66□□□□□ -2.3
TMEM116-211ENST00000550233 LRP1Q07954 4544 aaKnown RBP0.65□□□□□ -2.3
TMEM116-211ENST00000550233 UGGT2Q9NYU1 1516 aa0.65□□□□□ -2.31
TMEM116-211ENST00000550233 KLK9Q2XQG4 91 aa0.65□□□□□ -2.31
TMEM116-211ENST00000550233 SYNE1Q8NF91 8797 aaKnown RBP0.65□□□□□ -2.31
TMEM116-211ENST00000550233 DOT1LQ8TEK3 1739 aa0.64□□□□□ -2.31
TMEM116-211ENST00000550233 LRRIQ1Q96JM4 1722 aa0.64□□□□□ -2.31
TMEM116-211ENST00000550233 DUOX2Q9NRD8 1548 aa0.64□□□□□ -2.31
TMEM116-211ENST00000550233 HUWE1Q7Z6Z7 4374 aaKnown RBP0.63□□□□□ -2.31
TMEM116-211ENST00000550233 CFAP43Q8NDM7 1665 aa0.63□□□□□ -2.31
TMEM116-211ENST00000550233 NDUFA4O00483 81 aa0.63□□□□□ -2.31
TMEM116-211ENST00000550233 DEFA5Q01523 94 aa0.63□□□□□ -2.31
TMEM116-211ENST00000550233 MYO5CQ9NQX4 1742 aa0.61□□□□□ -2.31
TMEM116-211ENST00000550233 TNRC6CQ9HCJ0 1690 aaKnown RBP0.6□□□□□ -2.31
TMEM116-211ENST00000550233 NESP48681 1621 aa0.6□□□□□ -2.31
TMEM116-211ENST00000550233 DMBT1Q9UGM3 2413 aaPredicted RBP0.59□□□□□ -2.31
TMEM116-211ENST00000550233 EP300Q09472 2414 aaPredicted RBP0.59□□□□□ -2.32
TMEM116-211ENST00000550233 KNL1Q8NG31 2342 aa0.58□□□□□ -2.32
TMEM116-211ENST00000550233 IQGAP3Q86VI3 1631 aa0.58□□□□□ -2.32
TMEM116-211ENST00000550233 H3BVH4 76 aa0.58□□□□□ -2.32
TMEM116-211ENST00000550233 C3orf79P0CE67 100 aa0.58□□□□□ -2.32
TMEM116-211ENST00000550233 WFDC13Q8IUB5 93 aa0.58□□□□□ -2.32
TMEM116-211ENST00000550233 LMTK2Q8IWU2 1503 aa0.58□□□□□ -2.32
TMEM116-211ENST00000550233 MAST4O15021 2626 aa0.57□□□□□ -2.32
TMEM116-211ENST00000550233 EIF2AK4Q9P2K8 1649 aaKnown RBP0.57□□□□□ -2.32
TMEM116-211ENST00000550233 FAT4Q6V0I7 4981 aa0.57□□□□□ -2.32
TMEM116-211ENST00000550233 RALGAPBQ86X10 1494 aa0.57□□□□□ -2.32
TMEM116-211ENST00000550233 LOC730098B7Z3J9 87 aa0.57□□□□□ -2.32
TMEM116-211ENST00000550233 NDUFA3O95167 84 aa0.57□□□□□ -2.32
TMEM116-211ENST00000550233 PKD1L1Q8TDX9 2849 aa0.57□□□□□ -2.32
TMEM116-211ENST00000550233 FAT2Q9NYQ8 4349 aa0.56□□□□□ -2.32
TMEM116-211ENST00000550233 MRPL33O75394 65 aaKnown RBP0.55□□□□□ -2.32
TMEM116-211ENST00000550233 LELP1Q5T871 98 aa0.55□□□□□ -2.32
TMEM116-211ENST00000550233 PRO3102Q9H379 93 aa0.55□□□□□ -2.32
TMEM116-211ENST00000550233 HFM1A2PYH4 1435 aa0.55□□□□□ -2.32
TMEM116-211ENST00000550233 REV3LO60673 3130 aa0.54□□□□□ -2.32
TMEM116-211ENST00000550233 MAP1BP46821 2468 aaKnown RBP0.54□□□□□ -2.32
TMEM116-211ENST00000550233 ATXN8Q156A1 80 aa0.54□□□□□ -2.32
TMEM116-211ENST00000550233 CACNA1AO00555 2505 aa0.54□□□□□ -2.32
TMEM116-211ENST00000550233 THOC2Q8NI27 1593 aaKnown RBP0.53□□□□□ -2.32
TMEM116-211ENST00000550233 PRKDCP78527 4128 aaKnown RBP0.53□□□□□ -2.33
TMEM116-211ENST00000550233 PLCH1Q4KWH8 1693 aa0.53□□□□□ -2.33
TMEM116-211ENST00000550233 WNK1Q9H4A3 2382 aa0.52□□□□□ -2.33
TMEM116-211ENST00000550233 DEFB131BA0A096LNP1 70 aa0.52□□□□□ -2.33
TMEM116-211ENST00000550233 CICQ96RK0 1608 aaPredicted RBP0.52□□□□□ -2.33
TMEM116-211ENST00000550233 RICTORQ6R327 1708 aa0.52□□□□□ -2.33
TMEM116-211ENST00000550233 KMT2AQ03164 3969 aa0.51□□□□□ -2.33
TMEM116-211ENST00000550233 PDE4DIPQ5VU43 2346 aa0.51□□□□□ -2.33
TMEM116-211ENST00000550233 HRNRQ86YZ3 2850 aaPredicted RBP0.51□□□□□ -2.33
TMEM116-211ENST00000550233 UBL5Q9BZL1 73 aa0.51□□□□□ -2.33
TMEM116-211ENST00000550233 TNXBP22105 4242 aa0.5□□□□□ -2.33
TMEM116-211ENST00000550233 CDC42BPGQ6DT37 1551 aa0.5□□□□□ -2.33
TMEM116-211ENST00000550233 PHGR1C9JFL3 82 aa0.5□□□□□ -2.33
TMEM116-211ENST00000550233 KCNQ1DNQ9H478 68 aa0.5□□□□□ -2.33
TMEM116-211ENST00000550233 CELSR1Q9NYQ6 3014 aa0.5□□□□□ -2.33
TMEM116-211ENST00000550233 BSNQ9UPA5 3926 aa0.5□□□□□ -2.33
TMEM116-211ENST00000550233 DDX60LQ5H9U9 1706 aaKnown RBP0.5□□□□□ -2.33
TMEM116-211ENST00000550233 MYCBP2O75592 4640 aa0.49□□□□□ -2.33
TMEM116-211ENST00000550233 M0R2T5 61 aa0.49□□□□□ -2.33
TMEM116-211ENST00000550233 WIZO95785 1651 aa0.49□□□□□ -2.33
TMEM116-211ENST00000550233 ASXL1Q8IXJ9 1541 aa0.48□□□□□ -2.33
TMEM116-211ENST00000550233 SETXQ7Z333 2677 aaKnown RBP0.48□□□□□ -2.33
TMEM116-211ENST00000550233 LINC00158P58513 81 aa0.48□□□□□ -2.33
TMEM116-211ENST00000550233 ENHOQ6UWT2 76 aa0.48□□□□□ -2.33
TMEM116-211ENST00000550233 GNG13Q9P2W3 67 aa0.48□□□□□ -2.33
TMEM116-211ENST00000550233 HILPDAQ9Y5L2 63 aa0.48□□□□□ -2.33
TMEM116-211ENST00000550233 APC2O95996 2303 aa0.48□□□□□ -2.33
TMEM116-211ENST00000550233 TRANK1O15050 2925 aa0.48□□□□□ -2.33
TMEM116-211ENST00000550233 C4AP0C0L4 1744 aa0.47□□□□□ -2.33
TMEM116-211ENST00000550233 C4BP0C0L5 1744 aa0.47□□□□□ -2.33
TMEM116-211ENST00000550233 DEPDC5O75140 1603 aa0.47□□□□□ -2.33
TMEM116-211ENST00000550233 DNMBPQ6XZF7 1577 aa0.47□□□□□ -2.33
TMEM116-211ENST00000550233 EFCAB5A4FU69 1503 aa0.47□□□□□ -2.33
TMEM116-211ENST00000550233 NHSQ6T4R5 1651 aa0.46□□□□□ -2.34
TMEM116-211ENST00000550233 PLXNC1O60486 1568 aa0.46□□□□□ -2.34
TMEM116-211ENST00000550233 PRM1P04553 51 aa0.46□□□□□ -2.34
TMEM116-211ENST00000550233 LPAP08519 4548 aa0.46□□□□□ -2.34
TMEM116-211ENST00000550233 DIP2AQ14689 1571 aa0.45□□□□□ -2.34
TMEM116-211ENST00000550233 PARP4Q9UKK3 1724 aaKnown RBP0.45□□□□□ -2.34
TMEM116-211ENST00000550233 ZC3H13Q5T200 1668 aaKnown RBP0.45□□□□□ -2.34
TMEM116-211ENST00000550233 ABCA9Q8IUA7 1624 aa0.45□□□□□ -2.34
TMEM116-211ENST00000550233 ADAMTS12P58397 1594 aa0.45□□□□□ -2.34
TMEM116-211ENST00000550233 FLNCQ14315 2725 aa0.44□□□□□ -2.34
TMEM116-211ENST00000550233 SMIM31A0A1B0GVY4 71 aa0.44□□□□□ -2.34
TMEM116-211ENST00000550233 ALMS1Q8TCU4 4167 aa0.44□□□□□ -2.34
TMEM116-211ENST00000550233 FLNAP21333 2647 aaKnown RBP0.43□□□□□ -2.34
TMEM116-211ENST00000550233 SPRR2DP22532 72 aa0.43□□□□□ -2.34
TMEM116-211ENST00000550233 DEFB135Q30KP9 77 aa0.43□□□□□ -2.34
TMEM116-211ENST00000550233 LYNX1G3V0Z9 82 aa0.42□□□□□ -2.34
TMEM116-211ENST00000550233 DEFB114Q30KQ6 69 aa0.42□□□□□ -2.34
TMEM116-211ENST00000550233 ITSN1Q15811 1721 aa0.41□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms