RNA–Protein interactions for RNA: ENST00000550233.1

TMEM116-211, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 5

Gene TMEM116, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-211ENST00000550233 AEBP2Q6ZN18 517 aaPredicted RBP17.02■□□□□ 0.32
TMEM116-211ENST00000550233 CHIC1Q5VXU3 224 aa16.44■□□□□ 0.22
TMEM116-211ENST00000550233 SENP3Q9H4L4 574 aaPredicted RBP14.68□□□□□ -0.06
TMEM116-211ENST00000550233 PHF23Q9BUL5 403 aaPredicted RBP14.45□□□□□ -0.1
TMEM116-211ENST00000550233 PLPPR3Q6T4P5 718 aa13.74□□□□□ -0.21
TMEM116-211ENST00000550233 FOXD1Q16676 465 aa13.64□□□□□ -0.23
TMEM116-211ENST00000550233 POTEDQ86YR6 584 aa12.95□□□□□ -0.34
TMEM116-211ENST00000550233 MSH5O43196 834 aa12.93□□□□□ -0.34
TMEM116-211ENST00000550233 PIAS4Q8N2W9 510 aaPredicted RBP12.8□□□□□ -0.36
TMEM116-211ENST00000550233 EHMT2Q96KQ7 1210 aa12.69□□□□□ -0.38
TMEM116-211ENST00000550233 ADRA2BP18089 450 aa12.66□□□□□ -0.38
TMEM116-211ENST00000550233 KCNA4P22459 653 aa12.66□□□□□ -0.38
TMEM116-211ENST00000550233 PPP6R1Q9UPN7 881 aa12.56□□□□□ -0.4
TMEM116-211ENST00000550233 SLC4A1APQ9BWU0 796 aaKnown RBP12.26□□□□□ -0.45
TMEM116-211ENST00000550233 CSRNP3Q8WYN3 585 aa12.22□□□□□ -0.45
TMEM116-211ENST00000550233 NCBP3Q53F19 620 aaKnown RBP12.17□□□□□ -0.46
TMEM116-211ENST00000550233 PPP4R3CPQ6ZMV5 832 aa12.14□□□□□ -0.47
TMEM116-211ENST00000550233 NPM3O75607 178 aaKnown RBP11.83□□□□□ -0.52
TMEM116-211ENST00000550233 CNKSR2Q8WXI2 1034 aa11.69□□□□□ -0.54
TMEM116-211ENST00000550233 SCAF1Q9H7N4 1312 aaKnown RBP11.66□□□□□ -0.54
TMEM116-211ENST00000550233 ZBTB22O15209 634 aa11.61□□□□□ -0.55
TMEM116-211ENST00000550233 MAPK8IP2Q13387 824 aaPredicted RBP11.61□□□□□ -0.55
TMEM116-211ENST00000550233 SLC24A1O60721 1099 aa11.56□□□□□ -0.56
TMEM116-211ENST00000550233 DMRT2Q9Y5R5 561 aa11.55□□□□□ -0.56
TMEM116-211ENST00000550233 DNAJC5BQ9UF47 199 aa11.54□□□□□ -0.56
TMEM116-211ENST00000550233 FOXD4L1Q9NU39 408 aa11.53□□□□□ -0.56
TMEM116-211ENST00000550233 AMER1Q5JTC6 1135 aaPredicted RBP11.48□□□□□ -0.57
TMEM116-211ENST00000550233 DCAF8L1A6NGE4 600 aa11.33□□□□□ -0.6
TMEM116-211ENST00000550233 RTN4Q9NQC3 1192 aaKnown RBP11.33□□□□□ -0.6
TMEM116-211ENST00000550233 CACNB1Q02641 598 aaPredicted RBP11.32□□□□□ -0.6
TMEM116-211ENST00000550233 RNF216Q9NWF9 866 aaPredicted RBP11.28□□□□□ -0.6
TMEM116-211ENST00000550233 ATXN8OSP0DMR3 200 aa11.13□□□□□ -0.63
TMEM116-211ENST00000550233 HOXD11P31277 338 aaPredicted RBP11.02□□□□□ -0.65
TMEM116-211ENST00000550233 FKBP8Q14318 412 aa11.02□□□□□ -0.65
TMEM116-211ENST00000550233 MYCNP04198 464 aaPredicted RBP11.01□□□□□ -0.65
TMEM116-211ENST00000550233 SLC4A2P04920 1241 aa10.97□□□□□ -0.65
TMEM116-211ENST00000550233 RNF39Q9H2S5 420 aa10.93□□□□□ -0.66
TMEM116-211ENST00000550233 C1QBPQ07021 282 aaKnown RBP10.82□□□□□ -0.68
TMEM116-211ENST00000550233 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.68□□□□□ -0.7
TMEM116-211ENST00000550233 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.66□□□□□ -0.7
TMEM116-211ENST00000550233 HNRNPUL2Q1KMD3 747 aaKnown RBP10.66□□□□□ -0.7
TMEM116-211ENST00000550233 SAMD1Q6SPF0 538 aaPredicted RBP10.62□□□□□ -0.71
TMEM116-211ENST00000550233 FBXO3Q9UK99 471 aa10.57□□□□□ -0.72
TMEM116-211ENST00000550233 PLCB2Q00722 1185 aa10.5□□□□□ -0.73
TMEM116-211ENST00000550233 ATF5Q9Y2D1 282 aaPredicted RBP10.49□□□□□ -0.73
TMEM116-211ENST00000550233 APLP2Q06481 763 aa10.41□□□□□ -0.74
TMEM116-211ENST00000550233 BCANQ96GW7 911 aa10.35□□□□□ -0.75
TMEM116-211ENST00000550233 ZNF219Q9P2Y4 722 aaPredicted RBP10.35□□□□□ -0.75
TMEM116-211ENST00000550233 U3KPZ7 1027 aaPredicted RBP10.35□□□□□ -0.75
TMEM116-211ENST00000550233 CAPN15O75808 1086 aa10.34□□□□□ -0.75
TMEM116-211ENST00000550233 SPDYE4A6NLX3 237 aa10.33□□□□□ -0.76
TMEM116-211ENST00000550233 HAP1P54257 671 aaPredicted RBP10.32□□□□□ -0.76
TMEM116-211ENST00000550233 VASPP50552 380 aaPredicted RBP10.3□□□□□ -0.76
TMEM116-211ENST00000550233 VSIG10Q8N0Z9 540 aa10.28□□□□□ -0.76
TMEM116-211ENST00000550233 PROM2Q8N271 834 aa10.28□□□□□ -0.76
TMEM116-211ENST00000550233 DCAF8L2P0C7V8 631 aa10.25□□□□□ -0.77
TMEM116-211ENST00000550233 SPINK5Q9NQ38 1064 aaPredicted RBP10.22□□□□□ -0.77
TMEM116-211ENST00000550233 FBLN2P98095 1184 aa10.2□□□□□ -0.78
TMEM116-211ENST00000550233 DSG3P32926 999 aa10.18□□□□□ -0.78
TMEM116-211ENST00000550233 IFNLR1Q8IU57 520 aaPredicted RBP10.16□□□□□ -0.78
TMEM116-211ENST00000550233 POTEHQ6S545 545 aa10.15□□□□□ -0.78
TMEM116-211ENST00000550233 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.15□□□□□ -0.78
TMEM116-211ENST00000550233 TAOK2Q9UL54 1235 aa10.15□□□□□ -0.78
TMEM116-211ENST00000550233 TRHP20396 242 aaPredicted RBP10.13□□□□□ -0.79
TMEM116-211ENST00000550233 MKRN4PQ13434 485 aaPredicted RBP10.12□□□□□ -0.79
TMEM116-211ENST00000550233 PKD2Q13563 968 aa10.11□□□□□ -0.79
TMEM116-211ENST00000550233 BBXQ8WY36 941 aaPredicted RBP10.09□□□□□ -0.79
TMEM116-211ENST00000550233 ABCB7O75027 752 aa10.05□□□□□ -0.8
TMEM116-211ENST00000550233 PRKCSHP14314 528 aaPredicted RBP10.04□□□□□ -0.8
TMEM116-211ENST00000550233 SPOCK2Q92563 424 aa10.01□□□□□ -0.81
TMEM116-211ENST00000550233 ZBTB12Q9Y330 459 aaPredicted RBP9.98□□□□□ -0.81
TMEM116-211ENST00000550233 ECM2O94769 699 aaPredicted RBP9.97□□□□□ -0.81
TMEM116-211ENST00000550233 TPRNQ4KMQ1 711 aa9.96□□□□□ -0.82
TMEM116-211ENST00000550233 PAXIP1Q6ZW49 1069 aaPredicted RBP9.96□□□□□ -0.82
TMEM116-211ENST00000550233 KLHL34Q8N239 644 aa9.96□□□□□ -0.82
TMEM116-211ENST00000550233 KDM2AQ9Y2K7 1162 aa9.94□□□□□ -0.82
TMEM116-211ENST00000550233 POLA2Q14181 598 aa9.93□□□□□ -0.82
TMEM116-211ENST00000550233 STAG3Q9UJ98 1225 aa9.93□□□□□ -0.82
TMEM116-211ENST00000550233 CFAP44Q96MT7 982 aa9.91□□□□□ -0.82
TMEM116-211ENST00000550233 SPRYD3Q8NCJ5 442 aa9.9□□□□□ -0.82
TMEM116-211ENST00000550233 NPM1P06748 294 aaKnown RBP eCLIP9.86□□□□□ -0.83
TMEM116-211ENST00000550233 RBM42Q9BTD8 480 aaKnown RBP9.83□□□□□ -0.84
TMEM116-211ENST00000550233 PLCD3Q8N3E9 789 aa9.81□□□□□ -0.84
TMEM116-211ENST00000550233 RGL2O15211 777 aa9.78□□□□□ -0.84
TMEM116-211ENST00000550233 NBR1Q14596 966 aa9.78□□□□□ -0.84
TMEM116-211ENST00000550233 TSHZ2Q9NRE2 1034 aa9.78□□□□□ -0.84
TMEM116-211ENST00000550233 TRIM41Q8WV44 630 aa9.77□□□□□ -0.85
TMEM116-211ENST00000550233 ZBTB47Q9UFB7 747 aaPredicted RBP9.76□□□□□ -0.85
TMEM116-211ENST00000550233 PLEKHG5O94827 1062 aa9.74□□□□□ -0.85
TMEM116-211ENST00000550233 DNAJC5Q9H3Z4 198 aa9.74□□□□□ -0.85
TMEM116-211ENST00000550233 ZNF692Q9BU19 519 aaPredicted RBP9.73□□□□□ -0.85
TMEM116-211ENST00000550233 CHGAP10645 457 aaKnown RBP9.72□□□□□ -0.85
TMEM116-211ENST00000550233 MIER1Q8N108 512 aa9.72□□□□□ -0.85
TMEM116-211ENST00000550233 SPDYE2BA6NHP3 402 aa9.71□□□□□ -0.86
TMEM116-211ENST00000550233 SPDYE6P0CI01 402 aa9.71□□□□□ -0.86
TMEM116-211ENST00000550233 SPDYE2Q495Y8 402 aa9.71□□□□□ -0.86
TMEM116-211ENST00000550233 ERICH6Q7L0X2 663 aa9.71□□□□□ -0.86
TMEM116-211ENST00000550233 CIZ1Q9ULV3 898 aaPredicted RBP9.67□□□□□ -0.86
TMEM116-211ENST00000550233 SSUH2Q9Y2M2 353 aa9.67□□□□□ -0.86
TMEM116-211ENST00000550233 CHRDL2Q6WN34 429 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms