RNA–Protein interactions for RNA: ENST00000548863.1

CNOT2-215, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 3

Gene CNOT2, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-215ENST00000548863 NWD1Q149M9 1564 aa0.69□□□□□ -2.3
CNOT2-215ENST00000548863 GOLGA4Q13439 2230 aaKnown RBP0.69□□□□□ -2.3
CNOT2-215ENST00000548863 QSER1Q2KHR3 1735 aa0.69□□□□□ -2.3
CNOT2-215ENST00000548863 JMJD1CQ15652 2540 aa0.69□□□□□ -2.3
CNOT2-215ENST00000548863 ADCY10Q96PN6 1610 aa0.68□□□□□ -2.3
CNOT2-215ENST00000548863 BIVM-ERCC5R4GMW8 1640 aa0.68□□□□□ -2.3
CNOT2-215ENST00000548863 MRPL33O75394 65 aaKnown RBP0.68□□□□□ -2.3
CNOT2-215ENST00000548863 SPINK9Q5DT21 86 aa0.68□□□□□ -2.3
CNOT2-215ENST00000548863 TOMM5Q8N4H5 51 aa0.68□□□□□ -2.3
CNOT2-215ENST00000548863 DEFB123Q8N688 67 aa0.68□□□□□ -2.3
CNOT2-215ENST00000548863 CMC2Q9NRP2 79 aa0.68□□□□□ -2.3
CNOT2-215ENST00000548863 AHCTF1Q8WYP5 2266 aa0.68□□□□□ -2.3
CNOT2-215ENST00000548863 LY75O60449 1722 aa0.67□□□□□ -2.3
CNOT2-215ENST00000548863 NAV3Q8IVL0 2385 aa0.67□□□□□ -2.3
CNOT2-215ENST00000548863 DEFB131BA0A096LNP1 70 aa0.67□□□□□ -2.3
CNOT2-215ENST00000548863 K7EQZ3 153 aa0.67□□□□□ -2.3
CNOT2-215ENST00000548863 PLNP26678 52 aa0.67□□□□□ -2.3
CNOT2-215ENST00000548863 MRPL34Q9BQ48 92 aaKnown RBP0.67□□□□□ -2.3
CNOT2-215ENST00000548863 CNFNQ9BYD5 112 aa0.67□□□□□ -2.3
CNOT2-215ENST00000548863 URB1O60287 2271 aaKnown RBP0.67□□□□□ -2.3
CNOT2-215ENST00000548863 ABCA5Q8WWZ7 1642 aa0.67□□□□□ -2.3
CNOT2-215ENST00000548863 TNCP24821 2201 aa0.66□□□□□ -2.3
CNOT2-215ENST00000548863 FAM208BQ5VWN6 2430 aa0.66□□□□□ -2.3
CNOT2-215ENST00000548863 IGIPA6NJ69 53 aa0.66□□□□□ -2.3
CNOT2-215ENST00000548863 C10orf95Q9H7T3 257 aa0.66□□□□□ -2.3
CNOT2-215ENST00000548863 ABRACLQ9P1F3 81 aa0.66□□□□□ -2.3
CNOT2-215ENST00000548863 PRO0255Q9UI72 69 aa0.66□□□□□ -2.3
CNOT2-215ENST00000548863 CACNA1EQ15878 2313 aa0.66□□□□□ -2.3
CNOT2-215ENST00000548863 ABCC8Q09428 1581 aa0.66□□□□□ -2.3
CNOT2-215ENST00000548863 C3P01024 1663 aa0.65□□□□□ -2.3
CNOT2-215ENST00000548863 CCL22O00626 93 aa0.65□□□□□ -2.31
CNOT2-215ENST00000548863 CRIP1P50238 77 aa0.65□□□□□ -2.31
CNOT2-215ENST00000548863 COX6A2Q02221 97 aa0.65□□□□□ -2.31
CNOT2-215ENST00000548863 Q8IZM0 81 aa0.65□□□□□ -2.31
CNOT2-215ENST00000548863 AGLP35573 1532 aa0.64□□□□□ -2.31
CNOT2-215ENST00000548863 TJP1Q07157 1748 aa0.64□□□□□ -2.31
CNOT2-215ENST00000548863 DDX60LQ5H9U9 1706 aaKnown RBP0.64□□□□□ -2.31
CNOT2-215ENST00000548863 NDUFA3O95167 84 aa0.64□□□□□ -2.31
CNOT2-215ENST00000548863 COX6B1P14854 86 aa0.64□□□□□ -2.31
CNOT2-215ENST00000548863 COX6B2Q6YFQ2 88 aa0.64□□□□□ -2.31
CNOT2-215ENST00000548863 CDKN2A-AS1Q9UH64 79 aa0.64□□□□□ -2.31
CNOT2-215ENST00000548863 IQGAP2Q13576 1575 aa0.64□□□□□ -2.31
CNOT2-215ENST00000548863 TNRC6CQ9HCJ0 1690 aaKnown RBP0.64□□□□□ -2.31
CNOT2-215ENST00000548863 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.64□□□□□ -2.312e-14■■■□□ 16.4
CNOT2-215ENST00000548863 NRXN3Q9Y4C0 1643 aa0.64□□□□□ -2.31
CNOT2-215ENST00000548863 KIAA0586Q9BVV6 1533 aa0.64□□□□□ -2.31
CNOT2-215ENST00000548863 ANKRD36CQ5JPF3 1778 aa0.63□□□□□ -2.31
CNOT2-215ENST00000548863 A0A0D9SG42 100 aa0.63□□□□□ -2.31
CNOT2-215ENST00000548863 SMIM27A0A1W2PRY6 76 aa0.63□□□□□ -2.31
CNOT2-215ENST00000548863 H0YGX0 51 aa0.63□□□□□ -2.31
CNOT2-215ENST00000548863 PRO3102Q9H379 93 aa0.63□□□□□ -2.31
CNOT2-215ENST00000548863 TIMM8BQ9Y5J9 83 aaPredicted RBP0.63□□□□□ -2.31
CNOT2-215ENST00000548863 LINC00158P58513 81 aa0.62□□□□□ -2.31
CNOT2-215ENST00000548863 APLNQ9ULZ1 77 aa0.62□□□□□ -2.31
CNOT2-215ENST00000548863 CNOT1A5YKK6 2376 aaKnown RBP0.62□□□□□ -2.31
CNOT2-215ENST00000548863 LINC01546A6NGU7 62 aa0.61□□□□□ -2.31
CNOT2-215ENST00000548863 LOC730098B7Z3J9 87 aa0.61□□□□□ -2.31
CNOT2-215ENST00000548863 SPRR1AP35321 89 aa0.61□□□□□ -2.31
CNOT2-215ENST00000548863 LELP1Q5T871 98 aa0.61□□□□□ -2.31
CNOT2-215ENST00000548863 Q5VSD8 79 aa0.61□□□□□ -2.31
CNOT2-215ENST00000548863 FAM208AQ9UK61 1670 aaKnown RBP0.61□□□□□ -2.31
CNOT2-215ENST00000548863 DOPEY2Q9Y3R5 2298 aa0.61□□□□□ -2.31
CNOT2-215ENST00000548863 LYNX1G3V0Z9 82 aa0.6□□□□□ -2.31
CNOT2-215ENST00000548863 H0YAA0 97 aa0.6□□□□□ -2.31
CNOT2-215ENST00000548863 SPINK4O60575 86 aa0.6□□□□□ -2.31
CNOT2-215ENST00000548863 SPRR1BP22528 89 aa0.6□□□□□ -2.31
CNOT2-215ENST00000548863 H1FX-AS1Q4G0G2 97 aa0.6□□□□□ -2.31
CNOT2-215ENST00000548863 DEFB105AQ8NG35 78 aa0.6□□□□□ -2.31
CNOT2-215ENST00000548863 TMEM167BQ9NRX6 74 aa0.6□□□□□ -2.31
CNOT2-215ENST00000548863 DEPDC5O75140 1603 aa0.6□□□□□ -2.31
CNOT2-215ENST00000548863 PIEZO2Q9H5I5 2752 aa0.59□□□□□ -2.31
CNOT2-215ENST00000548863 PLCE1Q9P212 2302 aa0.59□□□□□ -2.31
CNOT2-215ENST00000548863 MINOS1Q5TGZ0 78 aa0.59□□□□□ -2.31
CNOT2-215ENST00000548863 WFDC13Q8IUB5 93 aa0.59□□□□□ -2.31
CNOT2-215ENST00000548863 LINC00308Q8TCZ7 52 aa0.59□□□□□ -2.31
CNOT2-215ENST00000548863 TOGARAM1Q9Y4F4 1720 aa0.58□□□□□ -2.32
CNOT2-215ENST00000548863 PTPRZ1P23471 2315 aaPredicted RBP0.58□□□□□ -2.32
CNOT2-215ENST00000548863 PTPRQQ9UMZ3 2332 aa0.58□□□□□ -2.32
CNOT2-215ENST00000548863 C6orf48Q9UBA6 75 aa0.58□□□□□ -2.32
CNOT2-215ENST00000548863 TRPM2O94759 1503 aa0.58□□□□□ -2.32
CNOT2-215ENST00000548863 C4AP0C0L4 1744 aa0.58□□□□□ -2.32
CNOT2-215ENST00000548863 C4BP0C0L5 1744 aa0.58□□□□□ -2.32
CNOT2-215ENST00000548863 SPTBN2O15020 2390 aa0.57□□□□□ -2.32
CNOT2-215ENST00000548863 C2CD3Q4AC94 2353 aa0.57□□□□□ -2.32
CNOT2-215ENST00000548863 USF3Q68DE3 2245 aa0.57□□□□□ -2.32
CNOT2-215ENST00000548863 GPR98Q8WXG9 6306 aa0.57□□□□□ -2.32
CNOT2-215ENST00000548863 IAPPP10997 89 aa0.57□□□□□ -2.32
CNOT2-215ENST00000548863 KLK9Q2XQG4 91 aa0.57□□□□□ -2.32
CNOT2-215ENST00000548863 CACNA1HO95180 2353 aa0.56□□□□□ -2.32
CNOT2-215ENST00000548863 ZNF462Q96JM2 2506 aa0.56□□□□□ -2.32
CNOT2-215ENST00000548863 ATP7AQ04656 1500 aa0.56□□□□□ -2.32
CNOT2-215ENST00000548863 DEFB130BP0DP73 79 aa0.56□□□□□ -2.32
CNOT2-215ENST00000548863 DEFB130AP0DP74 79 aa0.56□□□□□ -2.32
CNOT2-215ENST00000548863 IQGAP1P46940 1657 aa0.56□□□□□ -2.32
CNOT2-215ENST00000548863 LMO7Q8WWI1 1683 aa0.56□□□□□ -2.32
CNOT2-215ENST00000548863 DDX60Q8IY21 1712 aaKnown RBP0.55□□□□□ -2.32
CNOT2-215ENST00000548863 SPTBN1Q01082 2364 aaKnown RBP0.55□□□□□ -2.32
CNOT2-215ENST00000548863 TFF3Q07654 80 aa0.55□□□□□ -2.32
CNOT2-215ENST00000548863 CDC42BPAQ5VT25 1732 aa0.55□□□□□ -2.32
CNOT2-215ENST00000548863 TTC28Q96AY4 2481 aa0.55□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms