RNA–Protein interactions for RNA: ENST00000548278.1

RITA1-201, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RITA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-201ENST00000548278 GAGE2AQ6NT46 116 aa13.41□□□□□ -0.26
RITA1-201ENST00000548278 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.41□□□□□ -0.26
RITA1-201ENST00000548278 IGLV1-50A0A075B6I6 118 aa13.4□□□□□ -0.26
RITA1-201ENST00000548278 FAM19A5Q7Z5A7 132 aaPredicted RBP13.4□□□□□ -0.26
RITA1-201ENST00000548278 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.4□□□□□ -0.27
RITA1-201ENST00000548278 A0A096LNI7 61 aa13.39□□□□□ -0.27
RITA1-201ENST00000548278 RPL37AP8A6NKH3 93 aa13.39□□□□□ -0.27
RITA1-201ENST00000548278 C16orf90A8MZG2 172 aa13.39□□□□□ -0.27
RITA1-201ENST00000548278 ANAPC13Q9BS18 74 aa13.39□□□□□ -0.27
RITA1-201ENST00000548278 H3BQ85 93 aa13.38□□□□□ -0.27
RITA1-201ENST00000548278 MRPL55Q7Z7F7 128 aaKnown RBP13.38□□□□□ -0.27
RITA1-201ENST00000548278 PRYO14603 147 aa13.36□□□□□ -0.27
RITA1-201ENST00000548278 SDIM1Q6ZPB5 146 aa13.36□□□□□ -0.27
RITA1-201ENST00000548278 KRTAP4-16G5E9R7 235 aaPredicted RBP13.35□□□□□ -0.27
RITA1-201ENST00000548278 M0R2N4 97 aa13.35□□□□□ -0.27
RITA1-201ENST00000548278 SPRR1AP35321 89 aa13.35□□□□□ -0.27
RITA1-201ENST00000548278 SMCR5Q8TEV8 140 aa13.35□□□□□ -0.27
RITA1-201ENST00000548278 IGKV2-24A0A0C4DH68 120 aa13.34□□□□□ -0.27
RITA1-201ENST00000548278 FBN3Q75N90 2809 aa13.33□□□□□ -0.27
RITA1-201ENST00000548278 SS18L2Q9UHA2 77 aa13.33□□□□□ -0.28
RITA1-201ENST00000548278 CCKP06307 115 aa13.32□□□□□ -0.28
RITA1-201ENST00000548278 LAMTOR3Q9UHA4 124 aa13.32□□□□□ -0.28
RITA1-201ENST00000548278 C9orf163Q8N9P6 203 aa13.32□□□□□ -0.28
RITA1-201ENST00000548278 A0A1W2PNN7 141 aa13.31□□□□□ -0.28
RITA1-201ENST00000548278 B5MCH6 92 aa13.31□□□□□ -0.28
RITA1-201ENST00000548278 GHRHP01286 108 aa13.31□□□□□ -0.28
RITA1-201ENST00000548278 Q6Q795 121 aa13.31□□□□□ -0.28
RITA1-201ENST00000548278 RBM3P98179 157 aaKnown RBP13.3□□□□□ -0.28
RITA1-201ENST00000548278 Q6ZRX8 168 aa13.3□□□□□ -0.28
RITA1-201ENST00000548278 Q6ZR54 194 aa13.28□□□□□ -0.28
RITA1-201ENST00000548278 ETDCA0A1B0GVM5 59 aa13.27□□□□□ -0.28
RITA1-201ENST00000548278 LINC00643Q86TS7 51 aa13.27□□□□□ -0.28
RITA1-201ENST00000548278 Q9BRP9 147 aa13.27□□□□□ -0.29
RITA1-201ENST00000548278 LOC110117498A0A087WWA1 95 aa13.26□□□□□ -0.29
RITA1-201ENST00000548278 CHTF8P0CG12 524 aa13.26□□□□□ -0.29
RITA1-201ENST00000548278 NDUFV3P56181 108 aaKnown RBP13.26□□□□□ -0.29
RITA1-201ENST00000548278 LINC00846Q9NV44 126 aa13.26□□□□□ -0.29
RITA1-201ENST00000548278 DHRS4-AS1Q9P1J3 65 aa13.26□□□□□ -0.29
RITA1-201ENST00000548278 REG3GQ6UW15 175 aa13.25□□□□□ -0.29
RITA1-201ENST00000548278 Q6ZQT0 140 aa13.25□□□□□ -0.29
RITA1-201ENST00000548278 KMT2AQ03164 3969 aa13.24□□□□□ -0.29
RITA1-201ENST00000548278 PKIGQ9Y2B9 76 aa13.24□□□□□ -0.29
RITA1-201ENST00000548278 A0A087WTM6 91 aa13.22□□□□□ -0.29
RITA1-201ENST00000548278 TRBV7-7A0A0K0K1E9 115 aa13.22□□□□□ -0.29
RITA1-201ENST00000548278 DSCR8Q96T75 97 aa13.22□□□□□ -0.29
RITA1-201ENST00000548278 LINC01547P58512 204 aaPredicted RBP13.2□□□□□ -0.3
RITA1-201ENST00000548278 Q8N377 158 aa13.19□□□□□ -0.3
RITA1-201ENST00000548278 TRBV7-4A0A0J9YYF1 115 aa13.19□□□□□ -0.3
RITA1-201ENST00000548278 PDE6GP18545 87 aa13.19□□□□□ -0.3
RITA1-201ENST00000548278 LINC00474Q9P2X8 69 aa13.17□□□□□ -0.3
RITA1-201ENST00000548278 PHF5AQ7RTV0 110 aaKnown RBP13.17□□□□□ -0.3
RITA1-201ENST00000548278 DEFB105AQ8NG35 78 aa13.17□□□□□ -0.3
RITA1-201ENST00000548278 PANO1I0J062 215 aa13.16□□□□□ -0.3
RITA1-201ENST00000548278 ERC2-IT1O76042 136 aa13.16□□□□□ -0.3
RITA1-201ENST00000548278 TGP01266 2768 aa13.16□□□□□ -0.3
RITA1-201ENST00000548278 CCDC179H3BU77 68 aa13.16□□□□□ -0.3
RITA1-201ENST00000548278 IMUPQ9GZP8 106 aa13.16□□□□□ -0.3
RITA1-201ENST00000548278 DNAH2Q9P225 4427 aa13.15□□□□□ -0.3
RITA1-201ENST00000548278 UBE2BP63146 152 aa13.15□□□□□ -0.3
RITA1-201ENST00000548278 WWC2-AS2Q96NR7 200 aa13.15□□□□□ -0.3
RITA1-201ENST00000548278 KRTAP11-1Q8IUC1 163 aa13.14□□□□□ -0.31
RITA1-201ENST00000548278 ST20-AS1Q8NBB2 130 aa13.14□□□□□ -0.31
RITA1-201ENST00000548278 LY6G6CO95867 125 aa13.14□□□□□ -0.31
RITA1-201ENST00000548278 IGLV5-48A0A075B6I7 105 aa13.13□□□□□ -0.31
RITA1-201ENST00000548278 C1orf134Q5TEV5 83 aa13.12□□□□□ -0.31
RITA1-201ENST00000548278 Q6JHZ5 121 aa13.12□□□□□ -0.31
RITA1-201ENST00000548278 FAM19A1Q7Z5A9 133 aa13.11□□□□□ -0.31
RITA1-201ENST00000548278 SPACA4Q8TDM5 124 aa13.1□□□□□ -0.31
RITA1-201ENST00000548278 LINC00476Q8WZB0 136 aa13.1□□□□□ -0.31
RITA1-201ENST00000548278 FUSP35637 526 aaKnown RBP eCLIP13.09□□□□□ -0.31
RITA1-201ENST00000548278 PRLHP81277 87 aa13.09□□□□□ -0.31
RITA1-201ENST00000548278 SMIM20Q8N5G0 67 aa13.09□□□□□ -0.31
RITA1-201ENST00000548278 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.09□□□□□ -0.31
RITA1-201ENST00000548278 HECTD4Q9Y4D8 3996 aa13.09□□□□□ -0.31
RITA1-201ENST00000548278 RTL8CO15255 209 aa13.08□□□□□ -0.32
RITA1-201ENST00000548278 EPM2AB3EWF7 344 aa13.08□□□□□ -0.32
RITA1-201ENST00000548278 C3orf22Q8N5N4 141 aa13.08□□□□□ -0.32
RITA1-201ENST00000548278 DNAH6Q9C0G6 4158 aa13.08□□□□□ -0.32
RITA1-201ENST00000548278 IGKV3D-7A0A0C4DH55 119 aa13.07□□□□□ -0.32
RITA1-201ENST00000548278 DNAH17Q9UFH2 4485 aa13.07□□□□□ -0.32
RITA1-201ENST00000548278 UBL5Q9BZL1 73 aa13.06□□□□□ -0.32
RITA1-201ENST00000548278 DPH3Q96FX2 82 aa13.06□□□□□ -0.32
RITA1-201ENST00000548278 TNP2Q05952 138 aa13.04□□□□□ -0.32
RITA1-201ENST00000548278 H0Y9J4 135 aa13.03□□□□□ -0.32
RITA1-201ENST00000548278 HIGD2AQ9BW72 106 aa13.01□□□□□ -0.33
RITA1-201ENST00000548278 ATP5EP2Q5VTU8 51 aa13.01□□□□□ -0.33
RITA1-201ENST00000548278 SMIM29Q86T20 159 aa13□□□□□ -0.33
RITA1-201ENST00000548278 Q6ZVQ6 151 aa13□□□□□ -0.33
RITA1-201ENST00000548278 ALMS1Q8TCU4 4167 aa12.99□□□□□ -0.33
RITA1-201ENST00000548278 IGLV5-52A0A0A0MRZ9 124 aa12.99□□□□□ -0.33
RITA1-201ENST00000548278 FAM236AA0A1B0GUQ0 79 aa12.98□□□□□ -0.33
RITA1-201ENST00000548278 FAM236BA0A1B0GV22 79 aa12.98□□□□□ -0.33
RITA1-201ENST00000548278 C3orf84H3BNL1 204 aa12.98□□□□□ -0.33
RITA1-201ENST00000548278 BCE1O60756 84 aa12.97□□□□□ -0.33
RITA1-201ENST00000548278 UBE2AP49459 152 aa12.95□□□□□ -0.34
RITA1-201ENST00000548278 C1orf137Q5JT78 98 aa12.95□□□□□ -0.34
RITA1-201ENST00000548278 KRTAP13-1Q8IUC0 172 aa12.94□□□□□ -0.34
RITA1-201ENST00000548278 PLAC8Q9NZF1 115 aa12.93□□□□□ -0.34
RITA1-201ENST00000548278 HIST1H4AP62805 103 aaKnown RBP12.92□□□□□ -0.34
RITA1-201ENST00000548278 A0A1W2PNM2 257 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms