RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 NPC2P61916 151 aa11.34□□□□□ -0.59
CHD4-213ENST00000545584 JOSD1Q15040 202 aaPredicted RBP11.34□□□□□ -0.59
CHD4-213ENST00000545584 IGLV9-49A0A0B4J1Y8 123 aa11.33□□□□□ -0.6
CHD4-213ENST00000545584 SYS1-DBNDD2H3BUS1 97 aa11.33□□□□□ -0.6
CHD4-213ENST00000545584 Q9BRP9 147 aa11.33□□□□□ -0.6
CHD4-213ENST00000545584 CBY1Q9Y3M2 126 aa11.33□□□□□ -0.6
CHD4-213ENST00000545584 MOBPQ13875 183 aa11.32□□□□□ -0.6
CHD4-213ENST00000545584 ADAMTSL4-AS1Q5T5F5 129 aa11.32□□□□□ -0.6
CHD4-213ENST00000545584 SOSTDC1Q6X4U4 206 aa11.32□□□□□ -0.6
CHD4-213ENST00000545584 SSBP3-AS1Q7Z2R9 100 aa11.31□□□□□ -0.6
CHD4-213ENST00000545584 ZNF73O43830 326 aaPredicted RBP11.3□□□□□ -0.6
CHD4-213ENST00000545584 HINT1P49773 126 aaPredicted RBP11.3□□□□□ -0.6
CHD4-213ENST00000545584 MUC2Q02817 5179 aa11.3□□□□□ -0.6
CHD4-213ENST00000545584 EIF4EBP3O60516 100 aaPredicted RBP11.27□□□□□ -0.61
CHD4-213ENST00000545584 LINC01545Q5VT33 79 aa11.27□□□□□ -0.61
CHD4-213ENST00000545584 PET117Q6UWS5 81 aa11.27□□□□□ -0.61
CHD4-213ENST00000545584 TIMM17BO60830 172 aa11.26□□□□□ -0.61
CHD4-213ENST00000545584 OR13C6PQ8NH95 151 aa11.26□□□□□ -0.61
CHD4-213ENST00000545584 SPANXCQ9NY87 97 aa11.26□□□□□ -0.61
CHD4-213ENST00000545584 RPS29P62273 56 aaKnown RBP11.25□□□□□ -0.61
CHD4-213ENST00000545584 LINC00308Q8TCZ7 52 aa11.25□□□□□ -0.61
CHD4-213ENST00000545584 ZNF815PA8K554 130 aa11.24□□□□□ -0.61
CHD4-213ENST00000545584 C9orf153Q5TBE3 101 aa11.24□□□□□ -0.61
CHD4-213ENST00000545584 C5orf52A6NGY3 159 aa11.23□□□□□ -0.61
CHD4-213ENST00000545584 C3orf79P0CE67 100 aa11.23□□□□□ -0.61
CHD4-213ENST00000545584 COA6Q5JTJ3 125 aaKnown RBP11.23□□□□□ -0.61
CHD4-213ENST00000545584 LITAFQ99732 161 aa11.23□□□□□ -0.61
CHD4-213ENST00000545584 KRTAP13-3Q3SY46 172 aa11.22□□□□□ -0.61
CHD4-213ENST00000545584 SLC25A20O43772 301 aa11.21□□□□□ -0.61
CHD4-213ENST00000545584 Q8N377 158 aa11.2□□□□□ -0.62
CHD4-213ENST00000545584 ST20-AS1Q8NBB2 130 aa11.2□□□□□ -0.62
CHD4-213ENST00000545584 SPANXDQ9BXN6 97 aa11.2□□□□□ -0.62
CHD4-213ENST00000545584 KRTDAPP60985 99 aa11.19□□□□□ -0.62
CHD4-213ENST00000545584 LINC00518Q8N0U6 118 aa11.18□□□□□ -0.62
CHD4-213ENST00000545584 TTTY13Q9BZ97 58 aa11.18□□□□□ -0.62
CHD4-213ENST00000545584 SLC25A34Q6PIV7 304 aa11.17□□□□□ -0.62
CHD4-213ENST00000545584 DHRS4-AS1Q9P1J3 65 aa11.17□□□□□ -0.62
CHD4-213ENST00000545584 C20orf202A1L168 122 aa11.15□□□□□ -0.62
CHD4-213ENST00000545584 SCGB1D4Q6XE38 83 aa11.15□□□□□ -0.62
CHD4-213ENST00000545584 COPS9Q8WXC6 57 aa11.14□□□□□ -0.63
CHD4-213ENST00000545584 MUC17Q685J3 4493 aa11.13□□□□□ -0.63
CHD4-213ENST00000545584 COX7BP24311 80 aa11.13□□□□□ -0.63
CHD4-213ENST00000545584 SPRR1BP22528 89 aa11.12□□□□□ -0.63
CHD4-213ENST00000545584 ASB16-AS1Q495Z4 193 aa11.12□□□□□ -0.63
CHD4-213ENST00000545584 C6orf99Q4VX62 202 aa11.12□□□□□ -0.63
CHD4-213ENST00000545584 LAMTOR3Q9UHA4 124 aa11.12□□□□□ -0.63
CHD4-213ENST00000545584 ELOF1P60002 83 aaKnown RBP11.11□□□□□ -0.63
CHD4-213ENST00000545584 SEC61BP60468 96 aaKnown RBP11.11□□□□□ -0.63
CHD4-213ENST00000545584 LCE2AQ5TA79 106 aaPredicted RBP11.11□□□□□ -0.63
CHD4-213ENST00000545584 ANKRD39Q53RE8 183 aa11.09□□□□□ -0.63
CHD4-213ENST00000545584 ATOH7Q8N100 152 aa11.09□□□□□ -0.63
CHD4-213ENST00000545584 IFITM1P13164 125 aa11.08□□□□□ -0.64
CHD4-213ENST00000545584 AKR1D1P51857 326 aa11.08□□□□□ -0.64
CHD4-213ENST00000545584 TAL2Q16559 108 aa11.08□□□□□ -0.64
CHD4-213ENST00000545584 LIMD2Q9BT23 127 aa11.07□□□□□ -0.64
CHD4-213ENST00000545584 Q6ZVH6 145 aa11.06□□□□□ -0.64
CHD4-213ENST00000545584 TRBV7-6A0A0J9YX20 115 aa11.05□□□□□ -0.64
CHD4-213ENST00000545584 HRCT1Q6UXD1 115 aa11.05□□□□□ -0.64
CHD4-213ENST00000545584 DEFB105AQ8NG35 78 aa11.05□□□□□ -0.64
CHD4-213ENST00000545584 A6NDN8 102 aa11.04□□□□□ -0.64
CHD4-213ENST00000545584 FAT4Q6V0I7 4981 aa11.04□□□□□ -0.64
CHD4-213ENST00000545584 A0A1B0GWB2 263 aa11.03□□□□□ -0.64
CHD4-213ENST00000545584 TEX49A0A1B0GTD5 131 aa11.02□□□□□ -0.65
CHD4-213ENST00000545584 S100A1P23297 94 aa11.02□□□□□ -0.65
CHD4-213ENST00000545584 Q1RN00 199 aa11.02□□□□□ -0.65
CHD4-213ENST00000545584 PCP2Q8IVA1 136 aa11.02□□□□□ -0.65
CHD4-213ENST00000545584 XP32Q5T750 250 aa11.01□□□□□ -0.65
CHD4-213ENST00000545584 MUSTN1Q8IVN3 82 aa11.01□□□□□ -0.65
CHD4-213ENST00000545584 HIST3H2BBQ8N257 126 aa11.01□□□□□ -0.65
CHD4-213ENST00000545584 PRO1933Q9H354 126 aa11□□□□□ -0.65
CHD4-213ENST00000545584 SNRPEP62304 92 aaKnown RBP10.99□□□□□ -0.65
CHD4-213ENST00000545584 HIST1H2BLQ99880 126 aa10.99□□□□□ -0.65
CHD4-213ENST00000545584 S100A2P29034 98 aa10.98□□□□□ -0.65
CHD4-213ENST00000545584 CD164Q04900 197 aa10.98□□□□□ -0.65
CHD4-213ENST00000545584 TRAV13-2A0A0B4J235 113 aa10.97□□□□□ -0.65
CHD4-213ENST00000545584 A4D1N5 150 aa10.97□□□□□ -0.65
CHD4-213ENST00000545584 KRTAP9-2Q9BYQ4 174 aa10.97□□□□□ -0.65
CHD4-213ENST00000545584 LINC01547P58512 204 aaPredicted RBP10.96□□□□□ -0.65
CHD4-213ENST00000545584 NHP2Q9NX24 153 aaKnown RBP10.96□□□□□ -0.65
CHD4-213ENST00000545584 H7C2G1 150 aa10.95□□□□□ -0.66
CHD4-213ENST00000545584 KRTAP4-1Q9BYQ7 146 aa10.94□□□□□ -0.66
CHD4-213ENST00000545584 IGLV5-48A0A075B6I7 105 aa10.93□□□□□ -0.66
CHD4-213ENST00000545584 SMIM29Q86T20 159 aa10.92□□□□□ -0.66
CHD4-213ENST00000545584 SMIM11BQ8TCY0 68 aa10.92□□□□□ -0.66
CHD4-213ENST00000545584 HSBP1L1C9JCN9 74 aa10.91□□□□□ -0.66
CHD4-213ENST00000545584 S100A6P06703 90 aa10.91□□□□□ -0.66
CHD4-213ENST00000545584 C9orf92A6NGG3 77 aa10.89□□□□□ -0.67
CHD4-213ENST00000545584 VAMP3Q15836 100 aa10.89□□□□□ -0.67
CHD4-213ENST00000545584 Q5XG85 94 aa10.88□□□□□ -0.67
CHD4-213ENST00000545584 F8WEM9 126 aa10.84□□□□□ -0.67
CHD4-213ENST00000545584 A0A0G2JQZ4 141 aa10.83□□□□□ -0.68
CHD4-213ENST00000545584 PCOTHQ58A44 107 aa10.83□□□□□ -0.68
CHD4-213ENST00000545584 C1orf195Q5TG92 126 aa10.82□□□□□ -0.68
CHD4-213ENST00000545584 SCGB1D1O95968 90 aa10.81□□□□□ -0.68
CHD4-213ENST00000545584 LINC00575Q6W349 94 aa10.81□□□□□ -0.68
CHD4-213ENST00000545584 TCL1BO95988 128 aa10.8□□□□□ -0.68
CHD4-213ENST00000545584 IGLV8-61A0A075B6I0 122 aa10.79□□□□□ -0.68
CHD4-213ENST00000545584 hADV29S1A0JD25 119 aa10.79□□□□□ -0.68
CHD4-213ENST00000545584 Q6ZQY7 126 aa10.77□□□□□ -0.69
CHD4-213ENST00000545584 Q6JHZ5 121 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms