RNA–Protein interactions for RNA: ENST00000544506.1

LEMD3-205, Transcript of LEM domain containing 3, human

TSL 5

Gene LEMD3, Length 412 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LEMD3-205	ENST00000544506	ROMO1	P60602	79 aa		0.87	□□□□□ -2.27
LEMD3-205	ENST00000544506	MIR22HG	Q0VDD5	57 aa		0.87	□□□□□ -2.27
LEMD3-205	ENST00000544506	COX17	Q14061	63 aa		0.87	□□□□□ -2.27
LEMD3-205	ENST00000544506	RPL39P5	Q59GN2	51 aa		0.87	□□□□□ -2.27
LEMD3-205	ENST00000544506	FDCSP	Q8NFU4	85 aa		0.87	□□□□□ -2.27
LEMD3-205	ENST00000544506	SMIM11B	Q8TCY0	68 aa		0.87	□□□□□ -2.27
LEMD3-205	ENST00000544506	C4orf3	Q8WVX3	66 aa		0.87	□□□□□ -2.27
LEMD3-205	ENST00000544506	DMAC1	Q96GE9	116 aa		0.87	□□□□□ -2.27
LEMD3-205	ENST00000544506		Q9Y3F1	56 aa		0.87	□□□□□ -2.27
LEMD3-205	ENST00000544506	COL4A5	P29400	1685 aa		0.87	□□□□□ -2.27
LEMD3-205	ENST00000544506	ZNF469	Q96JG9	3925 aa	Predicted RBP	0.87	□□□□□ -2.27
LEMD3-205	ENST00000544506	F5	P12259	2224 aa		0.87	□□□□□ -2.27
LEMD3-205	ENST00000544506	MUC22	E2RYF6	1773 aa	Predicted RBP	0.86	□□□□□ -2.27
LEMD3-205	ENST00000544506	COL4A6	Q14031	1691 aa		0.86	□□□□□ -2.27
LEMD3-205	ENST00000544506		A0A087WSZ3	146 aa		0.86	□□□□□ -2.27
LEMD3-205	ENST00000544506	LCE6A	A0A183	80 aa		0.86	□□□□□ -2.27
LEMD3-205	ENST00000544506		K7EIM0	57 aa		0.86	□□□□□ -2.27
LEMD3-205	ENST00000544506	IGLV1-51	P01701	117 aa		0.86	□□□□□ -2.27
LEMD3-205	ENST00000544506	TFF1	P04155	84 aa		0.86	□□□□□ -2.27
LEMD3-205	ENST00000544506	CNBP	P62633	177 aa	Known RBP	0.86	□□□□□ -2.27
LEMD3-205	ENST00000544506	RPL39	P62891	51 aa	Known RBP	0.86	□□□□□ -2.27
LEMD3-205	ENST00000544506	WT1-AS	Q06250	92 aa		0.86	□□□□□ -2.27
LEMD3-205	ENST00000544506	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		0.86	□□□□□ -2.27
LEMD3-205	ENST00000544506	RPL39L	Q96EH5	51 aa	Known RBP	0.86	□□□□□ -2.27
LEMD3-205	ENST00000544506	KCNQ1DN	Q9H478	68 aa		0.86	□□□□□ -2.27
LEMD3-205	ENST00000544506	TP53AIP1	Q9HCN2	124 aa		0.86	□□□□□ -2.27
LEMD3-205	ENST00000544506	ASXL3	Q9C0F0	2248 aa		0.85	□□□□□ -2.27
LEMD3-205	ENST00000544506		I3L2K1	104 aa		0.85	□□□□□ -2.27
LEMD3-205	ENST00000544506		M0QY20	66 aa		0.85	□□□□□ -2.27
LEMD3-205	ENST00000544506	ACYP2	P14621	99 aa		0.85	□□□□□ -2.27
LEMD3-205	ENST00000544506	C1orf137	Q5JT78	98 aa		0.85	□□□□□ -2.27
LEMD3-205	ENST00000544506	CSAG1	Q6PB30	78 aa		0.85	□□□□□ -2.27
LEMD3-205	ENST00000544506	LINC00575	Q6W349	94 aa		0.85	□□□□□ -2.27
LEMD3-205	ENST00000544506		Q8TAT8	98 aa		0.85	□□□□□ -2.27
LEMD3-205	ENST00000544506	CDKN2A-AS1	Q9UH64	79 aa		0.85	□□□□□ -2.27
LEMD3-205	ENST00000544506	MED13L	Q71F56	2210 aa		0.85	□□□□□ -2.27
LEMD3-205	ENST00000544506	PTPRQ	Q9UMZ3	2332 aa		0.84	□□□□□ -2.27
LEMD3-205	ENST00000544506	TENM3	Q9P273	2699 aa		0.84	□□□□□ -2.27
LEMD3-205	ENST00000544506	ABCA4	P78363	2273 aa		0.84	□□□□□ -2.27
LEMD3-205	ENST00000544506	AHCTF1	Q8WYP5	2266 aa		0.84	□□□□□ -2.27
LEMD3-205	ENST00000544506	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	0.84	□□□□□ -2.27
LEMD3-205	ENST00000544506	DEFB131B	A0A096LNP1	70 aa		0.84	□□□□□ -2.27
LEMD3-205	ENST00000544506		A0A1B0GU69	56 aa		0.84	□□□□□ -2.27
LEMD3-205	ENST00000544506	CD52	P31358	61 aa		0.84	□□□□□ -2.27
LEMD3-205	ENST00000544506	CCL18	P55774	89 aa		0.84	□□□□□ -2.27
LEMD3-205	ENST00000544506	DEFB110	Q30KQ9	67 aa		0.84	□□□□□ -2.27
LEMD3-205	ENST00000544506	SPATA8	Q6RVD6	105 aa		0.84	□□□□□ -2.27
LEMD3-205	ENST00000544506		Q6ZQY7	126 aa		0.84	□□□□□ -2.27
LEMD3-205	ENST00000544506		Q8IZM0	81 aa		0.84	□□□□□ -2.27
LEMD3-205	ENST00000544506	LEAP2	Q969E1	77 aa		0.84	□□□□□ -2.27
LEMD3-205	ENST00000544506	TOMM7	Q9P0U1	55 aa		0.84	□□□□□ -2.27
LEMD3-205	ENST00000544506	DOPEY2	Q9Y3R5	2298 aa		0.84	□□□□□ -2.28
LEMD3-205	ENST00000544506	BPTF	Q12830	3046 aa		0.83	□□□□□ -2.28
LEMD3-205	ENST00000544506	TRGV1	A0A0A0MS02	117 aa		0.83	□□□□□ -2.28
LEMD3-205	ENST00000544506	NUPR2	A6NF83	97 aa		0.83	□□□□□ -2.28
LEMD3-205	ENST00000544506		B4DSR2	109 aa		0.83	□□□□□ -2.28
LEMD3-205	ENST00000544506	C10orf142	B7Z368	130 aa		0.83	□□□□□ -2.28
LEMD3-205	ENST00000544506	CCL3L1	P16619	93 aa		0.83	□□□□□ -2.28
LEMD3-205	ENST00000544506	USMG5	Q96IX5	58 aa		0.83	□□□□□ -2.28
LEMD3-205	ENST00000544506	PLCE1	Q9P212	2302 aa		0.83	□□□□□ -2.28
LEMD3-205	ENST00000544506	ABCA1	O95477	2261 aa		0.82	□□□□□ -2.28
LEMD3-205	ENST00000544506	SPTY2D1-AS1	A0A0U1RR47	76 aa		0.82	□□□□□ -2.28
LEMD3-205	ENST00000544506	CLPSL1	A2RUU4	121 aa		0.82	□□□□□ -2.28
LEMD3-205	ENST00000544506		H3BUA1	57 aa		0.82	□□□□□ -2.28
LEMD3-205	ENST00000544506	APELA	P0DMC3	54 aa		0.82	□□□□□ -2.28
LEMD3-205	ENST00000544506	SPINK7	P58062	85 aa		0.82	□□□□□ -2.28
LEMD3-205	ENST00000544506	DEFB131A	P59861	70 aa		0.82	□□□□□ -2.28
LEMD3-205	ENST00000544506	COX6A2	Q02221	97 aa		0.82	□□□□□ -2.28
LEMD3-205	ENST00000544506	MINOS1	Q5TGZ0	78 aa		0.82	□□□□□ -2.28
LEMD3-205	ENST00000544506	SPRR4	Q96PI1	79 aa		0.82	□□□□□ -2.28
LEMD3-205	ENST00000544506	PLAC8	Q9NZF1	115 aa		0.82	□□□□□ -2.28
LEMD3-205	ENST00000544506	KAAG1	Q9UBP8	84 aa		0.82	□□□□□ -2.28
LEMD3-205	ENST00000544506	WNK2	Q9Y3S1	2297 aa		0.82	□□□□□ -2.28
LEMD3-205	ENST00000544506	IGLV5-48	A0A075B6I7	105 aa		0.81	□□□□□ -2.28
LEMD3-205	ENST00000544506	KLK9	Q2XQG4	91 aa		0.81	□□□□□ -2.28
LEMD3-205	ENST00000544506	DEFB113	Q30KQ7	82 aa		0.81	□□□□□ -2.28
LEMD3-205	ENST00000544506	WFDC10B	Q8IUB3	73 aa		0.81	□□□□□ -2.28
LEMD3-205	ENST00000544506	DEFB108B	Q8NET1	73 aa		0.81	□□□□□ -2.28
LEMD3-205	ENST00000544506	C6orf48	Q9UBA6	75 aa		0.81	□□□□□ -2.28
LEMD3-205	ENST00000544506	NAV3	Q8IVL0	2385 aa		0.81	□□□□□ -2.28
LEMD3-205	ENST00000544506	LINC00959	A0A1B0GUT2	108 aa		0.8	□□□□□ -2.28
LEMD3-205	ENST00000544506		K7EQZ3	153 aa		0.8	□□□□□ -2.28
LEMD3-205	ENST00000544506	HTN1	P15515	57 aa		0.8	□□□□□ -2.28
LEMD3-205	ENST00000544506	SSBP3-AS1	Q7Z2R9	100 aa		0.8	□□□□□ -2.28
LEMD3-205	ENST00000544506	WFDC13	Q8IUB5	93 aa		0.8	□□□□□ -2.28
LEMD3-205	ENST00000544506	DEFB104A	Q8WTQ1	72 aa		0.8	□□□□□ -2.28
LEMD3-205	ENST00000544506	RHPN1-AS1	Q9BWJ2	59 aa		0.8	□□□□□ -2.28
LEMD3-205	ENST00000544506	CRIPT	Q9P021	101 aa		0.8	□□□□□ -2.28
LEMD3-205	ENST00000544506	CNOT1	A5YKK6	2376 aa	Known RBP	0.79	□□□□□ -2.28
LEMD3-205	ENST00000544506		A0A096LNT2	108 aa		0.79	□□□□□ -2.28
LEMD3-205	ENST00000544506	GVQW2	A0A096LPI5	108 aa	Predicted RBP	0.79	□□□□□ -2.28
LEMD3-205	ENST00000544506	LYNX1	G3V0Z9	82 aa		0.79	□□□□□ -2.28
LEMD3-205	ENST00000544506		H3BUX3	64 aa		0.79	□□□□□ -2.28
LEMD3-205	ENST00000544506	SPINK13	Q1W4C9	94 aa		0.79	□□□□□ -2.28
LEMD3-205	ENST00000544506	KRTAP26-1	Q6PEX3	210 aa		0.79	□□□□□ -2.28
LEMD3-205	ENST00000544506	DEFB105A	Q8NG35	78 aa		0.79	□□□□□ -2.28
LEMD3-205	ENST00000544506	PATE1	Q8WXA2	126 aa		0.79	□□□□□ -2.28
LEMD3-205	ENST00000544506	CCL19	Q99731	98 aa		0.79	□□□□□ -2.28
LEMD3-205	ENST00000544506	MRPL34	Q9BQ48	92 aa	Known RBP	0.79	□□□□□ -2.28
LEMD3-205	ENST00000544506		M0R2N4	97 aa		0.78	□□□□□ -2.28

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