RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 LINC01547P58512 204 aaPredicted RBP10.09□□□□□ -0.79
CHFR-223ENST00000544268 NANOS2P60321 138 aaKnown RBP10.08□□□□□ -0.8
CHFR-223ENST00000544268 CD164L2Q6UWJ8 174 aa10.08□□□□□ -0.8
CHFR-223ENST00000544268 Q6ZQT0 140 aa10.08□□□□□ -0.8
CHFR-223ENST00000544268 DNAH9Q9NYC9 4486 aa10.07□□□□□ -0.8
CHFR-223ENST00000544268 C11orf45Q8TAV5 145 aa10.07□□□□□ -0.8
CHFR-223ENST00000544268 LOC110117498A0A087WWA1 95 aa10.06□□□□□ -0.8
CHFR-223ENST00000544268 COL7A1Q02388 2944 aa10.06□□□□□ -0.8
CHFR-223ENST00000544268 UNQ6190/PRO20217Q6UXQ8 127 aa10.06□□□□□ -0.8
CHFR-223ENST00000544268 KLK12Q9UKR0 248 aa10.06□□□□□ -0.8
CHFR-223ENST00000544268 HAMPP81172 84 aa10.05□□□□□ -0.8
CHFR-223ENST00000544268 CXCL6P80162 114 aa10.05□□□□□ -0.8
CHFR-223ENST00000544268 Q6ZVQ6 151 aa10.04□□□□□ -0.8
CHFR-223ENST00000544268 TRBV7-4A0A0J9YYF1 115 aa10.03□□□□□ -0.8
CHFR-223ENST00000544268 DEFB131BA0A096LNP1 70 aa10.02□□□□□ -0.81
CHFR-223ENST00000544268 STAB2Q8WWQ8 2551 aa10.01□□□□□ -0.81
CHFR-223ENST00000544268 MPLKIPQ8TAP9 179 aa10.01□□□□□ -0.81
CHFR-223ENST00000544268 H3BNG1 76 aa10□□□□□ -0.81
CHFR-223ENST00000544268 FAM229BQ4G0N7 80 aa10□□□□□ -0.81
CHFR-223ENST00000544268 SPAG11BQ08648 103 aa9.99□□□□□ -0.81
CHFR-223ENST00000544268 M0R2N4 97 aa9.99□□□□□ -0.81
CHFR-223ENST00000544268 PDE6GP18545 87 aa9.99□□□□□ -0.81
CHFR-223ENST00000544268 LELP1Q5T871 98 aa9.98□□□□□ -0.81
CHFR-223ENST00000544268 LINC00575Q6W349 94 aa9.98□□□□□ -0.81
CHFR-223ENST00000544268 WFDC10BQ8IUB3 73 aa9.98□□□□□ -0.81
CHFR-223ENST00000544268 LAMTOR3Q9UHA4 124 aa9.98□□□□□ -0.81
CHFR-223ENST00000544268 PRKDCP78527 4128 aaKnown RBP9.98□□□□□ -0.81
CHFR-223ENST00000544268 B9D2Q9BPU9 175 aa9.98□□□□□ -0.81
CHFR-223ENST00000544268 ERC2-IT1O76042 136 aa9.97□□□□□ -0.81
CHFR-223ENST00000544268 C6orf99Q4VX62 202 aa9.97□□□□□ -0.81
CHFR-223ENST00000544268 MRPL55Q7Z7F7 128 aaKnown RBP9.97□□□□□ -0.81
CHFR-223ENST00000544268 XAGE1AQ9HD64 81 aa9.97□□□□□ -0.81
CHFR-223ENST00000544268 TMEM254Q8TBM7 123 aa9.96□□□□□ -0.82
CHFR-223ENST00000544268 NREPQ16612 68 aa9.95□□□□□ -0.82
CHFR-223ENST00000544268 HIGD2BQ4VC39 106 aa9.95□□□□□ -0.82
CHFR-223ENST00000544268 MEGF8Q7Z7M0 2845 aa9.95□□□□□ -0.82
CHFR-223ENST00000544268 PRR34Q9NV39 138 aa9.95□□□□□ -0.82
CHFR-223ENST00000544268 COX17Q14061 63 aa9.93□□□□□ -0.82
CHFR-223ENST00000544268 H3BQ85 93 aa9.93□□□□□ -0.82
CHFR-223ENST00000544268 ESRGQ1W209 222 aa9.93□□□□□ -0.82
CHFR-223ENST00000544268 C6orf48Q9UBA6 75 aa9.93□□□□□ -0.82
CHFR-223ENST00000544268 RBM12B-AS1Q9P1G2 102 aa9.92□□□□□ -0.82
CHFR-223ENST00000544268 BPY2O14599 106 aa9.91□□□□□ -0.82
CHFR-223ENST00000544268 LYSTQ99698 3801 aa9.9□□□□□ -0.82
CHFR-223ENST00000544268 MUC7Q8TAX7 377 aa9.9□□□□□ -0.82
CHFR-223ENST00000544268 SCXQ7RTU7 201 aa9.88□□□□□ -0.83
CHFR-223ENST00000544268 PRYO14603 147 aa9.88□□□□□ -0.83
CHFR-223ENST00000544268 FUSP35637 526 aaKnown RBP eCLIP9.87□□□□□ -0.83
CHFR-223ENST00000544268 KRTAP26-1Q6PEX3 210 aa9.86□□□□□ -0.83
CHFR-223ENST00000544268 Q6ZQY7 126 aa9.86□□□□□ -0.83
CHFR-223ENST00000544268 IGLV6-57P01721 117 aa9.84□□□□□ -0.83
CHFR-223ENST00000544268 CSMD3Q7Z407 3707 aa9.84□□□□□ -0.83
CHFR-223ENST00000544268 OCR1Q9BZK8 76 aa9.84□□□□□ -0.83
CHFR-223ENST00000544268 C15orf56Q8N910 161 aa9.83□□□□□ -0.84
CHFR-223ENST00000544268 CAMK2N2Q96S95 79 aa9.83□□□□□ -0.84
CHFR-223ENST00000544268 LINC00588Q9Y4M8 146 aa9.83□□□□□ -0.84
CHFR-223ENST00000544268 DYNC2H1Q8NCM8 4307 aaKnown RBP9.82□□□□□ -0.84
CHFR-223ENST00000544268 LINC01556Q5JQF7 62 aa9.81□□□□□ -0.84
CHFR-223ENST00000544268 DNAH7Q8WXX0 4024 aa9.79□□□□□ -0.84
CHFR-223ENST00000544268 GVQW2A0A096LPI5 108 aaPredicted RBP9.79□□□□□ -0.84
CHFR-223ENST00000544268 IGKV4-1P06312 121 aa9.79□□□□□ -0.84
CHFR-223ENST00000544268 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.79□□□□□ -0.84
CHFR-223ENST00000544268 KTN1-AS1Q86SY8 53 aa9.79□□□□□ -0.84
CHFR-223ENST00000544268 DNAH1Q9P2D7 4330 aa9.79□□□□□ -0.84
CHFR-223ENST00000544268 DNAH10Q8IVF4 4471 aa9.79□□□□□ -0.84
CHFR-223ENST00000544268 PLECQ15149 4684 aaKnown RBP9.79□□□□□ -0.84
CHFR-223ENST00000544268 IGKV2D-24A0A075B6R9 120 aa9.78□□□□□ -0.84
CHFR-223ENST00000544268 DNAH10OSP0CZ25 163 aa9.77□□□□□ -0.84
CHFR-223ENST00000544268 HIGD2AQ9BW72 106 aa9.77□□□□□ -0.84
CHFR-223ENST00000544268 FBN3Q75N90 2809 aa9.77□□□□□ -0.85
CHFR-223ENST00000544268 TENM2Q9NT68 2774 aa9.77□□□□□ -0.85
CHFR-223ENST00000544268 hDV103S1A0JD37 113 aa9.77□□□□□ -0.85
CHFR-223ENST00000544268 VPREB1P12018 145 aa9.77□□□□□ -0.85
CHFR-223ENST00000544268 COX7BP24311 80 aa9.77□□□□□ -0.85
CHFR-223ENST00000544268 Q1T7F1 81 aa9.77□□□□□ -0.85
CHFR-223ENST00000544268 Q6ZRP5 223 aa9.77□□□□□ -0.85
CHFR-223ENST00000544268 H3BS24 57 aa9.76□□□□□ -0.85
CHFR-223ENST00000544268 STARD9Q9P2P6 4700 aa9.76□□□□□ -0.85
CHFR-223ENST00000544268 CASC10Q5T4H9 136 aa9.76□□□□□ -0.85
CHFR-223ENST00000544268 Q8N9L7 120 aa9.76□□□□□ -0.85
CHFR-223ENST00000544268 ZNF73O43830 326 aaPredicted RBP9.75□□□□□ -0.85
CHFR-223ENST00000544268 APLNQ9ULZ1 77 aa9.75□□□□□ -0.85
CHFR-223ENST00000544268 DIRC1Q969H9 104 aa9.74□□□□□ -0.85
CHFR-223ENST00000544268 M0R378 163 aa9.73□□□□□ -0.85
CHFR-223ENST00000544268 TGP01266 2768 aa9.71□□□□□ -0.86
CHFR-223ENST00000544268 NUPR2A6NF83 97 aa9.71□□□□□ -0.86
CHFR-223ENST00000544268 SERTAD4-AS1Q5TG53 156 aa9.71□□□□□ -0.86
CHFR-223ENST00000544268 ELOF1P60002 83 aaKnown RBP9.69□□□□□ -0.86
CHFR-223ENST00000544268 LCE6AA0A183 80 aa9.68□□□□□ -0.86
CHFR-223ENST00000544268 FAM168BA1KXE4 195 aa9.68□□□□□ -0.86
CHFR-223ENST00000544268 C1orf64Q8NEQ6 169 aa9.68□□□□□ -0.86
CHFR-223ENST00000544268 C8orf87E5RJ46 101 aa9.67□□□□□ -0.86
CHFR-223ENST00000544268 UBE2DNLQ8IWF7 75 aa9.67□□□□□ -0.86
CHFR-223ENST00000544268 LRCOL1A6NCL2 159 aa9.67□□□□□ -0.86
CHFR-223ENST00000544268 A8MU10 97 aa9.67□□□□□ -0.86
CHFR-223ENST00000544268 SYCNQ0VAF6 134 aa9.67□□□□□ -0.86
CHFR-223ENST00000544268 RPL37AP8A6NKH3 93 aa9.65□□□□□ -0.86
CHFR-223ENST00000544268 PSPHP1O15172 72 aa9.65□□□□□ -0.86
CHFR-223ENST00000544268 KRTAP1-5Q9BYS1 174 aa9.65□□□□□ -0.86
CHFR-223ENST00000544268 LINC00528Q8N1L1 170 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms