RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 ASXL3Q9C0F0 2248 aa3.26□□□□□ -1.89
SNHG1-218ENST00000541615 INAFM1C9JVW0 142 aa3.26□□□□□ -1.89
SNHG1-218ENST00000541615 ANGP03950 147 aaKnown RBP3.26□□□□□ -1.89
SNHG1-218ENST00000541615 HTN1P15515 57 aa3.26□□□□□ -1.89
SNHG1-218ENST00000541615 LUZP6Q538Z0 58 aa3.26□□□□□ -1.89
SNHG1-218ENST00000541615 Q8N377 158 aa3.26□□□□□ -1.89
SNHG1-218ENST00000541615 TMEM105Q8N8V8 129 aa3.26□□□□□ -1.89
SNHG1-218ENST00000541615 GVINP1Q7Z2Y8 2422 aa3.26□□□□□ -1.89
SNHG1-218ENST00000541615 CFAP47Q6ZTR5 3102 aa3.26□□□□□ -1.89
SNHG1-218ENST00000541615 SDK1Q7Z5N4 2213 aa3.25□□□□□ -1.89
SNHG1-218ENST00000541615 MAP1BP46821 2468 aaKnown RBP3.25□□□□□ -1.89
SNHG1-218ENST00000541615 IGKV3OR2-268A0A0C4DH90 116 aa3.25□□□□□ -1.89
SNHG1-218ENST00000541615 PATE3B3GLJ2 98 aa3.25□□□□□ -1.89
SNHG1-218ENST00000541615 LYNX1G3V0Z9 82 aa3.25□□□□□ -1.89
SNHG1-218ENST00000541615 G3V318 75 aa3.25□□□□□ -1.89
SNHG1-218ENST00000541615 LINC01565O15544 149 aa3.25□□□□□ -1.89
SNHG1-218ENST00000541615 CMC4P56277 68 aaPredicted RBP3.25□□□□□ -1.89
SNHG1-218ENST00000541615 CSNK1G2-AS1Q8NCQ2 148 aa3.25□□□□□ -1.89
SNHG1-218ENST00000541615 C8orf17Q9NRJ1 99 aa3.25□□□□□ -1.89
SNHG1-218ENST00000541615 SORL1Q92673 2214 aa3.25□□□□□ -1.89
SNHG1-218ENST00000541615 DMDP11532 3685 aa3.25□□□□□ -1.89
SNHG1-218ENST00000541615 FASNP49327 2511 aaKnown RBP3.24□□□□□ -1.89
SNHG1-218ENST00000541615 CASC10Q5T4H9 136 aa3.24□□□□□ -1.89
SNHG1-218ENST00000541615 CEP250Q9BV73 2442 aa3.24□□□□□ -1.89
SNHG1-218ENST00000541615 IGLV5-52A0A0A0MRZ9 124 aa3.23□□□□□ -1.89
SNHG1-218ENST00000541615 IGKV2-24A0A0C4DH68 120 aa3.23□□□□□ -1.89
SNHG1-218ENST00000541615 P0C880 135 aa3.23□□□□□ -1.89
SNHG1-218ENST00000541615 DNAH10OSP0CZ25 163 aa3.23□□□□□ -1.89
SNHG1-218ENST00000541615 Q8N1X5 172 aa3.23□□□□□ -1.89
SNHG1-218ENST00000541615 C7orf33Q8WU49 177 aa3.23□□□□□ -1.89
SNHG1-218ENST00000541615 WNK2Q9Y3S1 2297 aa3.23□□□□□ -1.89
SNHG1-218ENST00000541615 OTOGLQ3ZCN5 2332 aa3.22□□□□□ -1.89
SNHG1-218ENST00000541615 CNOT1A5YKK6 2376 aaKnown RBP3.22□□□□□ -1.89
SNHG1-218ENST00000541615 SPTBN2O15020 2390 aa3.22□□□□□ -1.89
SNHG1-218ENST00000541615 IGLV8-61A0A075B6I0 122 aa3.22□□□□□ -1.89
SNHG1-218ENST00000541615 CYSRT1A8MQ03 144 aa3.22□□□□□ -1.89
SNHG1-218ENST00000541615 IGLV7-43P04211 117 aa3.22□□□□□ -1.89
SNHG1-218ENST00000541615 EGFEM1PQ0D2K5 195 aa3.22□□□□□ -1.89
SNHG1-218ENST00000541615 DEFB113Q30KQ7 82 aa3.22□□□□□ -1.89
SNHG1-218ENST00000541615 KRTAP26-1Q6PEX3 210 aa3.22□□□□□ -1.89
SNHG1-218ENST00000541615 C16orf74Q96GX8 76 aa3.22□□□□□ -1.89
SNHG1-218ENST00000541615 C6orf48Q9UBA6 75 aa3.22□□□□□ -1.89
SNHG1-218ENST00000541615 U3KQA8 63 aa3.22□□□□□ -1.89
SNHG1-218ENST00000541615 DNAH14Q0VDD8 3507 aa3.22□□□□□ -1.89
SNHG1-218ENST00000541615 NBEAQ8NFP9 2946 aa3.22□□□□□ -1.89
SNHG1-218ENST00000541615 MED13LQ71F56 2210 aa3.21□□□□□ -1.89
SNHG1-218ENST00000541615 NCOR2Q9Y618 2525 aa3.21□□□□□ -1.9
SNHG1-218ENST00000541615 H3BUX3 64 aa3.21□□□□□ -1.9
SNHG1-218ENST00000541615 KRTAP1-1Q07627 177 aa3.21□□□□□ -1.9
SNHG1-218ENST00000541615 PCOTHQ58A44 107 aa3.21□□□□□ -1.9
SNHG1-218ENST00000541615 Q5W150 140 aa3.21□□□□□ -1.9
SNHG1-218ENST00000541615 CAMK2N1Q7Z7J9 78 aa3.21□□□□□ -1.9
SNHG1-218ENST00000541615 SETXQ7Z333 2677 aaKnown RBP3.21□□□□□ -1.9
SNHG1-218ENST00000541615 GPR179Q6PRD1 2367 aa3.2□□□□□ -1.9
SNHG1-218ENST00000541615 FRYQ5TBA9 3013 aa3.2□□□□□ -1.9
SNHG1-218ENST00000541615 A8MUU9 505 aa3.2□□□□□ -1.9
SNHG1-218ENST00000541615 TLX1NBP0CAT3 122 aa3.2□□□□□ -1.9
SNHG1-218ENST00000541615 DEFB105AQ8NG35 78 aa3.2□□□□□ -1.9
SNHG1-218ENST00000541615 DSPP15924 2871 aaKnown RBP3.2□□□□□ -1.9
SNHG1-218ENST00000541615 USP24Q9UPU5 2620 aa3.2□□□□□ -1.9
SNHG1-218ENST00000541615 SPINT4Q6UDR6 99 aa3.19□□□□□ -1.9
SNHG1-218ENST00000541615 UNQ6190/PRO20217Q6UXQ8 127 aa3.19□□□□□ -1.9
SNHG1-218ENST00000541615 Q6ZRX8 168 aa3.19□□□□□ -1.9
SNHG1-218ENST00000541615 DEFB119Q8N690 84 aa3.19□□□□□ -1.9
SNHG1-218ENST00000541615 GCN1Q92616 2671 aaKnown RBP3.19□□□□□ -1.9
SNHG1-218ENST00000541615 ASPMQ8IZT6 3477 aa3.18□□□□□ -1.9
SNHG1-218ENST00000541615 FLNBO75369 2602 aaKnown RBP3.18□□□□□ -1.9
SNHG1-218ENST00000541615 A6NDX4 124 aa3.18□□□□□ -1.9
SNHG1-218ENST00000541615 KRTAP4-16G5E9R7 235 aaPredicted RBP3.18□□□□□ -1.9
SNHG1-218ENST00000541615 DEFB116Q30KQ4 102 aa3.18□□□□□ -1.9
SNHG1-218ENST00000541615 DEFB109BQ30KR1 87 aa3.18□□□□□ -1.9
SNHG1-218ENST00000541615 LINC00472Q9H8W2 130 aa3.18□□□□□ -1.9
SNHG1-218ENST00000541615 ABCA4P78363 2273 aa3.18□□□□□ -1.9
SNHG1-218ENST00000541615 DMXL2Q8TDJ6 3036 aa3.17□□□□□ -1.9
SNHG1-218ENST00000541615 NDUFAF8A1L188 74 aa3.17□□□□□ -1.9
SNHG1-218ENST00000541615 CCL19Q99731 98 aa3.17□□□□□ -1.9
SNHG1-218ENST00000541615 ANAPC11Q9NYG5 84 aa3.17□□□□□ -1.9
SNHG1-218ENST00000541615 ZZEF1O43149 2961 aa3.17□□□□□ -1.9
SNHG1-218ENST00000541615 LAMA1P25391 3075 aa3.16□□□□□ -1.9
SNHG1-218ENST00000541615 ASH1LQ9NR48 2969 aaKnown RBP3.16□□□□□ -1.9
SNHG1-218ENST00000541615 MMP24-AS1A0A0U1RRL7 71 aa3.16□□□□□ -1.9
SNHG1-218ENST00000541615 C4orf3Q8WVX3 66 aa3.16□□□□□ -1.9
SNHG1-218ENST00000541615 NAV2Q8IVL1 2488 aa3.16□□□□□ -1.9
SNHG1-218ENST00000541615 SPRR1AP35321 89 aa3.15□□□□□ -1.91
SNHG1-218ENST00000541615 WWC2-AS2Q96NR7 200 aa3.15□□□□□ -1.91
SNHG1-218ENST00000541615 NOP10Q9NPE3 64 aaKnown RBP3.15□□□□□ -1.91
SNHG1-218ENST00000541615 HELZ2Q9BYK8 2649 aaKnown RBP3.14□□□□□ -1.91
SNHG1-218ENST00000541615 IGFL1Q6UW32 110 aa3.14□□□□□ -1.91
SNHG1-218ENST00000541615 CLPSL2Q6UWE3 100 aa3.14□□□□□ -1.91
SNHG1-218ENST00000541615 ZFHX4Q86UP3 3567 aa3.14□□□□□ -1.91
SNHG1-218ENST00000541615 CEP295Q9C0D2 2601 aa3.14□□□□□ -1.91
SNHG1-218ENST00000541615 ICE1Q9Y2F5 2266 aa3.13□□□□□ -1.91
SNHG1-218ENST00000541615 DOPEY2Q9Y3R5 2298 aa3.13□□□□□ -1.91
SNHG1-218ENST00000541615 ACACAQ13085 2346 aa3.13□□□□□ -1.91
SNHG1-218ENST00000541615 LY6G6CO95867 125 aa3.13□□□□□ -1.91
SNHG1-218ENST00000541615 LINC00304Q8N9R0 145 aa3.13□□□□□ -1.91
SNHG1-218ENST00000541615 PRO0255Q9UI72 69 aa3.13□□□□□ -1.91
SNHG1-218ENST00000541615 FAM168BA1KXE4 195 aa3.12□□□□□ -1.91
SNHG1-218ENST00000541615 J3QKU1 62 aa3.12□□□□□ -1.91
SNHG1-218ENST00000541615 KRTAP15-1Q3LI76 137 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms